RNA–Protein interactions for RNA: ENST00000560596.5

MIR9-3HG-209, Transcript of MIR9-3 host gene, humanhuman

TSL 4

Gene MIR9-3HG, Length 606 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR9-3HG-209ENST00000560596 GRIN2AQ12879 1464 aa11.73□□□□□ -0.53
MIR9-3HG-209ENST00000560596 CEP170Q5SW79 1584 aa11.72□□□□□ -0.53
MIR9-3HG-209ENST00000560596 ERCC6L2Q5T890 1561 aa11.71□□□□□ -0.54
MIR9-3HG-209ENST00000560596 ERICH3Q5RHP9 1530 aa11.7□□□□□ -0.54
MIR9-3HG-209ENST00000560596 FHAD1B1AJZ9 1412 aa11.69□□□□□ -0.54
MIR9-3HG-209ENST00000560596 NUP160Q12769 1436 aa11.69□□□□□ -0.54
MIR9-3HG-209ENST00000560596 SHROOM2Q13796 1616 aa11.64□□□□□ -0.55
MIR9-3HG-209ENST00000560596 RUSC2Q8N2Y8 1516 aa11.6□□□□□ -0.55
MIR9-3HG-209ENST00000560596 IGF1RP08069 1367 aa11.6□□□□□ -0.55
MIR9-3HG-209ENST00000560596 SCAF1Q9H7N4 1312 aaKnown RBP11.6□□□□□ -0.55
MIR9-3HG-209ENST00000560596 TRHP20396 242 aaPredicted RBP11.59□□□□□ -0.55
MIR9-3HG-209ENST00000560596 KIF27Q86VH2 1401 aa11.59□□□□□ -0.55
MIR9-3HG-209ENST00000560596 CUL7Q14999 1698 aa11.56□□□□□ -0.56
MIR9-3HG-209ENST00000560596 PRG4Q92954 1404 aaPredicted RBP11.56□□□□□ -0.56
MIR9-3HG-209ENST00000560596 JPH4Q96JJ6 628 aa11.54□□□□□ -0.56
MIR9-3HG-209ENST00000560596 MAPK8IP2Q13387 824 aaPredicted RBP11.53□□□□□ -0.56
MIR9-3HG-209ENST00000560596 NCBP3Q53F19 620 aaKnown RBP11.53□□□□□ -0.56
MIR9-3HG-209ENST00000560596 CARMIL1Q5VZK9 1371 aa11.51□□□□□ -0.57
MIR9-3HG-209ENST00000560596 KIAA0586Q9BVV6 1533 aa11.5□□□□□ -0.57
MIR9-3HG-209ENST00000560596 CNKSR2Q8WXI2 1034 aa11.47□□□□□ -0.57
MIR9-3HG-209ENST00000560596 ADCY10Q96PN6 1610 aa11.46□□□□□ -0.58
MIR9-3HG-209ENST00000560596 KIF13AQ9H1H9 1805 aa11.44□□□□□ -0.58
MIR9-3HG-209ENST00000560596 IQGAP2Q13576 1575 aa11.43□□□□□ -0.58
MIR9-3HG-209ENST00000560596 RAPGEF2Q9Y4G8 1499 aa11.42□□□□□ -0.58
MIR9-3HG-209ENST00000560596 TTBK1Q5TCY1 1321 aaPredicted RBP11.41□□□□□ -0.58
MIR9-3HG-209ENST00000560596 NPM3O75607 178 aaKnown RBP11.41□□□□□ -0.58
MIR9-3HG-209ENST00000560596 DISP1Q96F81 1524 aa11.39□□□□□ -0.59
MIR9-3HG-209ENST00000560596 PTPRGP23470 1445 aa11.37□□□□□ -0.59
MIR9-3HG-209ENST00000560596 MAPKBP1O60336 1514 aa11.37□□□□□ -0.59
MIR9-3HG-209ENST00000560596 UGGT2Q9NYU1 1516 aa11.36□□□□□ -0.59
MIR9-3HG-209ENST00000560596 TNIKQ9UKE5 1360 aa11.36□□□□□ -0.59
MIR9-3HG-209ENST00000560596 DIP2BQ9P265 1576 aa11.36□□□□□ -0.59
MIR9-3HG-209ENST00000560596 CTTNBP2Q8WZ74 1663 aa11.36□□□□□ -0.59
MIR9-3HG-209ENST00000560596 CARMIL2Q6F5E8 1435 aa11.35□□□□□ -0.59
MIR9-3HG-209ENST00000560596 ABCC10Q5T3U5 1492 aa11.35□□□□□ -0.59
MIR9-3HG-209ENST00000560596 KIAA0556O60303 1618 aa11.35□□□□□ -0.59
MIR9-3HG-209ENST00000560596 PRXQ9BXM0 1461 aa11.34□□□□□ -0.59
MIR9-3HG-209ENST00000560596 NPM1P06748 294 aaKnown RBP eCLIP11.33□□□□□ -0.6
MIR9-3HG-209ENST00000560596 FAM69CQ0P6D2 419 aa11.33□□□□□ -0.6
MIR9-3HG-209ENST00000560596 ABCC2Q92887 1545 aa11.32□□□□□ -0.6
MIR9-3HG-209ENST00000560596 DMRT2Q9Y5R5 561 aa11.32□□□□□ -0.6
MIR9-3HG-209ENST00000560596 TSPOAP1O95153 1857 aa11.31□□□□□ -0.6
MIR9-3HG-209ENST00000560596 UACAQ9BZF9 1416 aa11.3□□□□□ -0.6
MIR9-3HG-209ENST00000560596 UHRF1BP1LA0JNW5 1464 aa11.29□□□□□ -0.6
MIR9-3HG-209ENST00000560596 ASXL2Q76L83 1435 aa11.28□□□□□ -0.6
MIR9-3HG-209ENST00000560596 ZCCHC11Q5TAX3 1644 aaKnown RBP11.27□□□□□ -0.61
MIR9-3HG-209ENST00000560596 PLB1Q6P1J6 1458 aa11.26□□□□□ -0.61
MIR9-3HG-209ENST00000560596 KDM5BQ9UGL1 1544 aa11.25□□□□□ -0.61
MIR9-3HG-209ENST00000560596 CSRNP3Q8WYN3 585 aa11.25□□□□□ -0.61
MIR9-3HG-209ENST00000560596 PPRC1Q5VV67 1664 aaKnown RBP11.24□□□□□ -0.61
MIR9-3HG-209ENST00000560596 FAM9AQ8IZU1 332 aaPredicted RBP11.23□□□□□ -0.61
MIR9-3HG-209ENST00000560596 GOLGA3Q08378 1498 aa11.23□□□□□ -0.61
MIR9-3HG-209ENST00000560596 ABCA8O94911 1581 aa11.23□□□□□ -0.61
MIR9-3HG-209ENST00000560596 GLI2P10070 1586 aa11.22□□□□□ -0.61
MIR9-3HG-209ENST00000560596 KDM6BO15054 1643 aa11.21□□□□□ -0.61
MIR9-3HG-209ENST00000560596 EPRSP07814 1512 aaKnown RBP11.21□□□□□ -0.61
MIR9-3HG-209ENST00000560596 P3H3Q8IVL6 736 aa11.21□□□□□ -0.61
MIR9-3HG-209ENST00000560596 RNF216Q9NWF9 866 aaPredicted RBP11.21□□□□□ -0.61
MIR9-3HG-209ENST00000560596 SAMD9Q5K651 1589 aa11.2□□□□□ -0.62
MIR9-3HG-209ENST00000560596 EEA1Q15075 1411 aa11.19□□□□□ -0.62
MIR9-3HG-209ENST00000560596 MAP3K4Q9Y6R4 1608 aa11.19□□□□□ -0.62
MIR9-3HG-209ENST00000560596 ARID3CA6NKF2 412 aa11.18□□□□□ -0.62
MIR9-3HG-209ENST00000560596 WDR7Q9Y4E6 1490 aa11.18□□□□□ -0.62
MIR9-3HG-209ENST00000560596 RANGAP1P46060 587 aaPredicted RBP11.17□□□□□ -0.62
MIR9-3HG-209ENST00000560596 SLC4A1APQ9BWU0 796 aaKnown RBP11.17□□□□□ -0.62
MIR9-3HG-209ENST00000560596 HOXD11P31277 338 aaPredicted RBP11.16□□□□□ -0.62
MIR9-3HG-209ENST00000560596 KIF21BO75037 1637 aa11.16□□□□□ -0.62
MIR9-3HG-209ENST00000560596 COL17A1Q9UMD9 1497 aaPredicted RBP11.15□□□□□ -0.62
MIR9-3HG-209ENST00000560596 EHMT2Q96KQ7 1210 aa11.15□□□□□ -0.62
MIR9-3HG-209ENST00000560596 FHOD3Q2V2M9 1422 aa11.14□□□□□ -0.63
MIR9-3HG-209ENST00000560596 RAPGEF6Q8TEU7 1601 aa11.13□□□□□ -0.63
MIR9-3HG-209ENST00000560596 ATP10BO94823 1461 aa11.12□□□□□ -0.63
MIR9-3HG-209ENST00000560596 KCNH8Q96L42 1107 aa11.12□□□□□ -0.63
MIR9-3HG-209ENST00000560596 NUP153P49790 1475 aaKnown RBP11.1□□□□□ -0.63
MIR9-3HG-209ENST00000560596 CFAP43Q8NDM7 1665 aa11.1□□□□□ -0.63
MIR9-3HG-209ENST00000560596 TEX14Q8IWB6 1497 aa11.09□□□□□ -0.63
MIR9-3HG-209ENST00000560596 CD109Q6YHK3 1445 aa11.09□□□□□ -0.63
MIR9-3HG-209ENST00000560596 KDM4FA0A1W2PPD8 638 aa11.07□□□□□ -0.64
MIR9-3HG-209ENST00000560596 MAGI3Q5TCQ9 1506 aa11.07□□□□□ -0.64
MIR9-3HG-209ENST00000560596 EFCAB5A4FU69 1503 aa11.06□□□□□ -0.64
MIR9-3HG-209ENST00000560596 ABCA9Q8IUA7 1624 aa11.05□□□□□ -0.64
MIR9-3HG-209ENST00000560596 UBTFP17480 764 aaKnown RBP11.04□□□□□ -0.64
MIR9-3HG-209ENST00000560596 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.03□□□□□ -0.64
MIR9-3HG-209ENST00000560596 HNRNPUL2Q1KMD3 747 aaKnown RBP11.03□□□□□ -0.64
MIR9-3HG-209ENST00000560596 ARHGAP35Q9NRY4 1499 aa11.03□□□□□ -0.64
MIR9-3HG-209ENST00000560596 CDK13Q14004 1512 aaKnown RBP11.03□□□□□ -0.64
MIR9-3HG-209ENST00000560596 ADGRL1O94910 1474 aa11.01□□□□□ -0.65
MIR9-3HG-209ENST00000560596 TTC37Q6PGP7 1564 aa10.99□□□□□ -0.65
MIR9-3HG-209ENST00000560596 ARAP3Q8WWN8 1544 aa10.98□□□□□ -0.65
MIR9-3HG-209ENST00000560596 LRRIQ1Q96JM4 1722 aa10.98□□□□□ -0.65
MIR9-3HG-209ENST00000560596 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.97□□□□□ -0.65
MIR9-3HG-209ENST00000560596 FRMPD1Q5SYB0 1578 aa10.97□□□□□ -0.65
MIR9-3HG-209ENST00000560596 HECW1Q76N89 1606 aa10.96□□□□□ -0.65
MIR9-3HG-209ENST00000560596 PLEKHD1A6NEE1 506 aa10.95□□□□□ -0.66
MIR9-3HG-209ENST00000560596 RAPGEF3O95398 923 aa10.95□□□□□ -0.66
MIR9-3HG-209ENST00000560596 NEO1Q92859 1461 aa10.94□□□□□ -0.66
MIR9-3HG-209ENST00000560596 FMN1Q68DA7 1419 aa10.94□□□□□ -0.66
MIR9-3HG-209ENST00000560596 ATP1B4Q9UN42 357 aaPredicted RBP10.94□□□□□ -0.66
MIR9-3HG-209ENST00000560596 KIF14Q15058 1648 aa10.93□□□□□ -0.66
MIR9-3HG-209ENST00000560596 PCF11O94913 1555 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms