RNA–Protein interactions for RNA: ENST00000560318.1

NUSAP1-211, Transcript of nucleolar and spindle associated protein 1, humanhuman

TSL 5

Gene NUSAP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUSAP1-211ENST00000560318 GRIN2AQ12879 1464 aa22.54■■□□□ 1.2
NUSAP1-211ENST00000560318 DCAF8L1A6NGE4 600 aa22.52■■□□□ 1.2
NUSAP1-211ENST00000560318 CLASP1Q7Z460 1538 aa22.51■■□□□ 1.19
NUSAP1-211ENST00000560318 RIMBP3CA6NJZ7 1639 aa22.5■■□□□ 1.19
NUSAP1-211ENST00000560318 RIMBP3BA6NNM3 1639 aa22.5■■□□□ 1.19
NUSAP1-211ENST00000560318 RIMBP3Q9UFD9 1639 aa22.5■■□□□ 1.19
NUSAP1-211ENST00000560318 HOXD11P31277 338 aaPredicted RBP22.5■■□□□ 1.19
NUSAP1-211ENST00000560318 ARHGEF11O15085 1522 aa22.5■■□□□ 1.19
NUSAP1-211ENST00000560318 NUP160Q12769 1436 aa22.44■■□□□ 1.18
NUSAP1-211ENST00000560318 CEP170Q5SW79 1584 aa22.43■■□□□ 1.18
NUSAP1-211ENST00000560318 RUSC2Q8N2Y8 1516 aa22.43■■□□□ 1.18
NUSAP1-211ENST00000560318 CNKSR2Q8WXI2 1034 aa22.43■■□□□ 1.18
NUSAP1-211ENST00000560318 CARMIL1Q5VZK9 1371 aa22.41■■□□□ 1.18
NUSAP1-211ENST00000560318 CUL7Q14999 1698 aa22.4■■□□□ 1.18
NUSAP1-211ENST00000560318 CACNB1Q02641 598 aaPredicted RBP22.4■■□□□ 1.18
NUSAP1-211ENST00000560318 CYB5RLQ6IPT4 315 aa22.4■■□□□ 1.18
NUSAP1-211ENST00000560318 ARAP1Q96P48 1450 aa22.32■■□□□ 1.16
NUSAP1-211ENST00000560318 JPH4Q96JJ6 628 aa22.31■■□□□ 1.16
NUSAP1-211ENST00000560318 RNF216Q9NWF9 866 aaPredicted RBP22.27■■□□□ 1.16
NUSAP1-211ENST00000560318 RAPGEF2Q9Y4G8 1499 aa22.25■■□□□ 1.15
NUSAP1-211ENST00000560318 SHROOM2Q13796 1616 aa22.24■■□□□ 1.15
NUSAP1-211ENST00000560318 KIAA0586Q9BVV6 1533 aa22.24■■□□□ 1.15
NUSAP1-211ENST00000560318 ERCC6L2Q5T890 1561 aa22.24■■□□□ 1.15
NUSAP1-211ENST00000560318 PRG4Q92954 1404 aaPredicted RBP22.22■■□□□ 1.15
NUSAP1-211ENST00000560318 CSRNP3Q8WYN3 585 aa22.2■■□□□ 1.14
NUSAP1-211ENST00000560318 FAM9AQ8IZU1 332 aaPredicted RBP22.17■■□□□ 1.14
NUSAP1-211ENST00000560318 PRXQ9BXM0 1461 aa22.15■■□□□ 1.14
NUSAP1-211ENST00000560318 EEA1Q15075 1411 aa22.14■■□□□ 1.13
NUSAP1-211ENST00000560318 RNF39Q9H2S5 420 aa22.11■■□□□ 1.13
NUSAP1-211ENST00000560318 IQGAP2Q13576 1575 aa22.08■■□□□ 1.13
NUSAP1-211ENST00000560318 CARMIL2Q6F5E8 1435 aa22.03■■□□□ 1.12
NUSAP1-211ENST00000560318 TTBK1Q5TCY1 1321 aaPredicted RBP22.02■■□□□ 1.12
NUSAP1-211ENST00000560318 CTTNBP2Q8WZ74 1663 aa21.98■■□□□ 1.11
NUSAP1-211ENST00000560318 UGGT2Q9NYU1 1516 aa21.97■■□□□ 1.11
NUSAP1-211ENST00000560318 TRHP20396 242 aaPredicted RBP21.97■■□□□ 1.11
NUSAP1-211ENST00000560318 PTPRGP23470 1445 aa21.97■■□□□ 1.11
NUSAP1-211ENST00000560318 TNIKQ9UKE5 1360 aa21.96■■□□□ 1.11
NUSAP1-211ENST00000560318 DISP1Q96F81 1524 aa21.95■■□□□ 1.1
NUSAP1-211ENST00000560318 EHMT2Q96KQ7 1210 aa21.91■■□□□ 1.1
NUSAP1-211ENST00000560318 NPM1P06748 294 aaKnown RBP eCLIP21.9■■□□□ 1.1
NUSAP1-211ENST00000560318 KIF21BO75037 1637 aa21.88■■□□□ 1.09
NUSAP1-211ENST00000560318 KIAA0556O60303 1618 aa21.87■■□□□ 1.09
NUSAP1-211ENST00000560318 GOLGA3Q08378 1498 aa21.86■■□□□ 1.09
NUSAP1-211ENST00000560318 NCBP3Q53F19 620 aaKnown RBP21.86■■□□□ 1.09
NUSAP1-211ENST00000560318 UBTFP17480 764 aaKnown RBP21.84■■□□□ 1.09
NUSAP1-211ENST00000560318 RANGAP1P46060 587 aaPredicted RBP21.84■■□□□ 1.09
NUSAP1-211ENST00000560318 ADCY10Q96PN6 1610 aa21.84■■□□□ 1.09
NUSAP1-211ENST00000560318 P3H3Q8IVL6 736 aa21.83■■□□□ 1.09
NUSAP1-211ENST00000560318 UACAQ9BZF9 1416 aa21.8■■□□□ 1.08
NUSAP1-211ENST00000560318 C1QBPQ07021 282 aaKnown RBP21.77■■□□□ 1.08
NUSAP1-211ENST00000560318 UHRF1BP1LA0JNW5 1464 aa21.75■■□□□ 1.07
NUSAP1-211ENST00000560318 ABCC2Q92887 1545 aa21.72■■□□□ 1.07
NUSAP1-211ENST00000560318 PLB1Q6P1J6 1458 aa21.71■■□□□ 1.07
NUSAP1-211ENST00000560318 SAMD9Q5K651 1589 aa21.7■■□□□ 1.06
NUSAP1-211ENST00000560318 MAPKBP1O60336 1514 aa21.7■■□□□ 1.06
NUSAP1-211ENST00000560318 FAM69CQ0P6D2 419 aa21.67■■□□□ 1.06
NUSAP1-211ENST00000560318 ABCA8O94911 1581 aa21.65■■□□□ 1.06
NUSAP1-211ENST00000560318 KDM5BQ9UGL1 1544 aa21.65■■□□□ 1.06
NUSAP1-211ENST00000560318 ABCC10Q5T3U5 1492 aa21.64■■□□□ 1.05
NUSAP1-211ENST00000560318 FHOD3Q2V2M9 1422 aa21.63■■□□□ 1.05
NUSAP1-211ENST00000560318 ASXL2Q76L83 1435 aa21.62■■□□□ 1.05
NUSAP1-211ENST00000560318 EFCAB5A4FU69 1503 aa21.6■■□□□ 1.05
NUSAP1-211ENST00000560318 KIF13AQ9H1H9 1805 aa21.59■■□□□ 1.05
NUSAP1-211ENST00000560318 ARID3CA6NKF2 412 aa21.59■■□□□ 1.05
NUSAP1-211ENST00000560318 ZCCHC11Q5TAX3 1644 aaKnown RBP21.58■■□□□ 1.05
NUSAP1-211ENST00000560318 NPM3O75607 178 aaKnown RBP21.58■■□□□ 1.05
NUSAP1-211ENST00000560318 DIP2BQ9P265 1576 aa21.56■■□□□ 1.04
NUSAP1-211ENST00000560318 ARHGAP35Q9NRY4 1499 aa21.54■■□□□ 1.04
NUSAP1-211ENST00000560318 RAPGEF6Q8TEU7 1601 aa21.53■■□□□ 1.04
NUSAP1-211ENST00000560318 ATP10BO94823 1461 aa21.52■■□□□ 1.03
NUSAP1-211ENST00000560318 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.51■■□□□ 1.03
NUSAP1-211ENST00000560318 HNRNPUL2Q1KMD3 747 aaKnown RBP21.51■■□□□ 1.03
NUSAP1-211ENST00000560318 KCNH8Q96L42 1107 aa21.49■■□□□ 1.03
NUSAP1-211ENST00000560318 WDR7Q9Y4E6 1490 aa21.47■■□□□ 1.03
NUSAP1-211ENST00000560318 EPRSP07814 1512 aaKnown RBP21.47■■□□□ 1.03
NUSAP1-211ENST00000560318 NUP153P49790 1475 aaKnown RBP21.46■■□□□ 1.03
NUSAP1-211ENST00000560318 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.46■■□□□ 1.034e-7■□□□□ 9.3
NUSAP1-211ENST00000560318 ATP1B4Q9UN42 357 aaPredicted RBP21.46■■□□□ 1.03
NUSAP1-211ENST00000560318 FMN1Q68DA7 1419 aa21.46■■□□□ 1.03
NUSAP1-211ENST00000560318 GLI2P10070 1586 aa21.45■■□□□ 1.02
NUSAP1-211ENST00000560318 LOC105371045A0A1W2PR82 267 aa21.45■■□□□ 1.02
NUSAP1-211ENST00000560318 TSPOAP1O95153 1857 aa21.43■■□□□ 1.02
NUSAP1-211ENST00000560318 CLIP1P30622 1438 aa21.42■■□□□ 1.02
NUSAP1-211ENST00000560318 PLEKHD1A6NEE1 506 aa21.38■■□□□ 1.01
NUSAP1-211ENST00000560318 MAP3K4Q9Y6R4 1608 aa21.34■■□□□ 1.01
NUSAP1-211ENST00000560318 CD109Q6YHK3 1445 aa21.32■■□□□ 1
NUSAP1-211ENST00000560318 HECW1Q76N89 1606 aa21.32■■□□□ 1
NUSAP1-211ENST00000560318 CDK13Q14004 1512 aaKnown RBP21.31■■□□□ 1
NUSAP1-211ENST00000560318 PPRC1Q5VV67 1664 aaKnown RBP21.31■■□□□ 1
NUSAP1-211ENST00000560318 CEP162Q5TB80 1403 aa21.29■■□□□ 1
NUSAP1-211ENST00000560318 CASKIN1Q8WXD9 1431 aa21.28■■□□□ 1
NUSAP1-211ENST00000560318 CFAP43Q8NDM7 1665 aa21.28■■□□□ 1
NUSAP1-211ENST00000560318 TEX14Q8IWB6 1497 aa21.27■■□□□ 1
NUSAP1-211ENST00000560318 CDK11AQ9UQ88 783 aaPredicted RBP21.27■■□□□ 1
NUSAP1-211ENST00000560318 KDM6BO15054 1643 aa21.26■□□□□ 0.99
NUSAP1-211ENST00000560318 MAGI3Q5TCQ9 1506 aa21.24■□□□□ 0.99
NUSAP1-211ENST00000560318 PCF11O94913 1555 aaKnown RBP21.23■□□□□ 0.99
NUSAP1-211ENST00000560318 ABCA9Q8IUA7 1624 aa21.22■□□□□ 0.99
NUSAP1-211ENST00000560318 LRRIQ1Q96JM4 1722 aa21.2■□□□□ 0.98
NUSAP1-211ENST00000560318 FYCO1Q9BQS8 1478 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms