RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 CEP170Q5SW79 1584 aa16.85■□□□□ 0.29
TPM1-221ENST00000559831 NUP160Q12769 1436 aa16.81■□□□□ 0.28
TPM1-221ENST00000559831 RANGAP1P46060 587 aaPredicted RBP16.81■□□□□ 0.28
TPM1-221ENST00000559831 IQGAP2Q13576 1575 aa16.8■□□□□ 0.28
TPM1-221ENST00000559831 KIAA0586Q9BVV6 1533 aa16.77■□□□□ 0.28
TPM1-221ENST00000559831 AEBP2Q6ZN18 517 aaPredicted RBP16.76■□□□□ 0.27
TPM1-221ENST00000559831 CEP162Q5TB80 1403 aa16.76■□□□□ 0.27
TPM1-221ENST00000559831 CLIP1P30622 1438 aa16.72■□□□□ 0.27
TPM1-221ENST00000559831 CLASP1Q7Z460 1538 aa16.71■□□□□ 0.27
TPM1-221ENST00000559831 DNAJC5Q9H3Z4 198 aa16.71■□□□□ 0.27
TPM1-221ENST00000559831 OSCARQ8IYS5 282 aa16.69■□□□□ 0.26
TPM1-221ENST00000559831 UGGT2Q9NYU1 1516 aa16.68■□□□□ 0.26
TPM1-221ENST00000559831 EFCAB5A4FU69 1503 aa16.67■□□□□ 0.26
TPM1-221ENST00000559831 SAMD9Q5K651 1589 aa16.66■□□□□ 0.26
TPM1-221ENST00000559831 SHROOM2Q13796 1616 aa16.66■□□□□ 0.26
TPM1-221ENST00000559831 ARHGAP35Q9NRY4 1499 aa16.66■□□□□ 0.26
TPM1-221ENST00000559831 P3H3Q8IVL6 736 aa16.64■□□□□ 0.25
TPM1-221ENST00000559831 JPH4Q96JJ6 628 aa16.64■□□□□ 0.25
TPM1-221ENST00000559831 KIAA0556O60303 1618 aa16.63■□□□□ 0.25
TPM1-221ENST00000559831 DISP1Q96F81 1524 aa16.61■□□□□ 0.25
TPM1-221ENST00000559831 FHOD3Q2V2M9 1422 aa16.61■□□□□ 0.25
TPM1-221ENST00000559831 PRG4Q92954 1404 aaPredicted RBP16.61■□□□□ 0.25
TPM1-221ENST00000559831 ARAP1Q96P48 1450 aa16.61■□□□□ 0.25
TPM1-221ENST00000559831 CARMIL2Q6F5E8 1435 aa16.59■□□□□ 0.25
TPM1-221ENST00000559831 ERCC6L2Q5T890 1561 aa16.57■□□□□ 0.24
TPM1-221ENST00000559831 TTBK1Q5TCY1 1321 aaPredicted RBP16.56■□□□□ 0.24
TPM1-221ENST00000559831 VPS8Q8N3P4 1428 aa16.52■□□□□ 0.23
TPM1-221ENST00000559831 FMN1Q68DA7 1419 aa16.49■□□□□ 0.23
TPM1-221ENST00000559831 PCF11O94913 1555 aaKnown RBP16.48■□□□□ 0.23
TPM1-221ENST00000559831 PTPRGP23470 1445 aa16.45■□□□□ 0.22
TPM1-221ENST00000559831 ARHGEF11O15085 1522 aa16.45■□□□□ 0.22
TPM1-221ENST00000559831 ATP1B4Q9UN42 357 aaPredicted RBP16.44■□□□□ 0.22
TPM1-221ENST00000559831 RIMBP3CA6NJZ7 1639 aa16.44■□□□□ 0.22
TPM1-221ENST00000559831 RIMBP3BA6NNM3 1639 aa16.44■□□□□ 0.22
TPM1-221ENST00000559831 RAPGEF6Q8TEU7 1601 aa16.44■□□□□ 0.22
TPM1-221ENST00000559831 RIMBP3Q9UFD9 1639 aa16.44■□□□□ 0.22
TPM1-221ENST00000559831 CASKIN1Q8WXD9 1431 aa16.42■□□□□ 0.22
TPM1-221ENST00000559831 FYCO1Q9BQS8 1478 aa16.42■□□□□ 0.22
TPM1-221ENST00000559831 HECW1Q76N89 1606 aa16.41■□□□□ 0.22
TPM1-221ENST00000559831 PLB1Q6P1J6 1458 aa16.41■□□□□ 0.22
TPM1-221ENST00000559831 LRRIQ1Q96JM4 1722 aa16.4■□□□□ 0.22
TPM1-221ENST00000559831 ABCA8O94911 1581 aa16.39■□□□□ 0.21
TPM1-221ENST00000559831 APLP2Q06481 763 aa16.37■□□□□ 0.21
TPM1-221ENST00000559831 UACAQ9BZF9 1416 aa16.36■□□□□ 0.21
TPM1-221ENST00000559831 CFAP43Q8NDM7 1665 aa16.35■□□□□ 0.21
TPM1-221ENST00000559831 ARID3CA6NKF2 412 aa16.35■□□□□ 0.21
TPM1-221ENST00000559831 NUP153P49790 1475 aaKnown RBP16.34■□□□□ 0.21
TPM1-221ENST00000559831 ABCC2Q92887 1545 aa16.34■□□□□ 0.21
TPM1-221ENST00000559831 TIAM1Q13009 1591 aa16.33■□□□□ 0.2
TPM1-221ENST00000559831 CDK13Q14004 1512 aaKnown RBP16.32■□□□□ 0.2
TPM1-221ENST00000559831 ADCY10Q96PN6 1610 aa16.31■□□□□ 0.2
TPM1-221ENST00000559831 EPRSP07814 1512 aaKnown RBP16.31■□□□□ 0.2
TPM1-221ENST00000559831 CCDC18Q5T9S5 1454 aa16.31■□□□□ 0.2
TPM1-221ENST00000559831 UHRF1BP1LA0JNW5 1464 aa16.29■□□□□ 0.2
TPM1-221ENST00000559831 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.29■□□□□ 0.2
TPM1-221ENST00000559831 HNRNPUL2Q1KMD3 747 aaKnown RBP16.29■□□□□ 0.2
TPM1-221ENST00000559831 PPARGC1BQ86YN6 1023 aaKnown RBP16.29■□□□□ 0.2
TPM1-221ENST00000559831 CYB5RLQ6IPT4 315 aa16.28■□□□□ 0.2
TPM1-221ENST00000559831 ZCCHC11Q5TAX3 1644 aaKnown RBP16.27■□□□□ 0.2
TPM1-221ENST00000559831 MAP3K1Q13233 1512 aa16.27■□□□□ 0.2
TPM1-221ENST00000559831 ATP10BO94823 1461 aa16.25■□□□□ 0.19
TPM1-221ENST00000559831 KANK4Q5T7N3 995 aaPredicted RBP16.22■□□□□ 0.19
TPM1-221ENST00000559831 KDM5BQ9UGL1 1544 aa16.22■□□□□ 0.19
TPM1-221ENST00000559831 LRRC9Q6ZRR7 1453 aa16.22■□□□□ 0.19
TPM1-221ENST00000559831 MAGI3Q5TCQ9 1506 aa16.2■□□□□ 0.18
TPM1-221ENST00000559831 EHBP1L1Q8N3D4 1523 aa16.2■□□□□ 0.18
TPM1-221ENST00000559831 MTUS2Q5JR59 1369 aa16.2■□□□□ 0.18
TPM1-221ENST00000559831 CDK11AQ9UQ88 783 aaPredicted RBP16.19■□□□□ 0.18
TPM1-221ENST00000559831 NPM1P06748 294 aaKnown RBP eCLIP16.18■□□□□ 0.18
TPM1-221ENST00000559831 SUPT6HQ7KZ85 1726 aaKnown RBP16.17■□□□□ 0.18
TPM1-221ENST00000559831 PLEKHD1A6NEE1 506 aa16.16■□□□□ 0.18
TPM1-221ENST00000559831 TROQ12816 1431 aaPredicted RBP16.15■□□□□ 0.18
TPM1-221ENST00000559831 KIF14Q15058 1648 aa16.13■□□□□ 0.17
TPM1-221ENST00000559831 ASXL2Q76L83 1435 aa16.11■□□□□ 0.17
TPM1-221ENST00000559831 WDR7Q9Y4E6 1490 aa16.1■□□□□ 0.17
TPM1-221ENST00000559831 NCOA2Q15596 1464 aa16.1■□□□□ 0.17
TPM1-221ENST00000559831 KCNH8Q96L42 1107 aa16.08■□□□□ 0.16
TPM1-221ENST00000559831 MAPKBP1O60336 1514 aa16.07■□□□□ 0.16
TPM1-221ENST00000559831 TTC37Q6PGP7 1564 aa16.04■□□□□ 0.16
TPM1-221ENST00000559831 PHLDB1Q86UU1 1377 aa16.04■□□□□ 0.16
TPM1-221ENST00000559831 CDC42BPAQ5VT25 1732 aa16.04■□□□□ 0.16
TPM1-221ENST00000559831 ITSN2Q9NZM3 1697 aa16.04■□□□□ 0.16
TPM1-221ENST00000559831 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.03■□□□□ 0.16
TPM1-221ENST00000559831 ABCC10Q5T3U5 1492 aa16.03■□□□□ 0.16
TPM1-221ENST00000559831 MYO5CQ9NQX4 1742 aa16.02■□□□□ 0.16
TPM1-221ENST00000559831 CCNB3Q8WWL7 1395 aa16.02■□□□□ 0.16
TPM1-221ENST00000559831 ABCA9Q8IUA7 1624 aa16■□□□□ 0.15
TPM1-221ENST00000559831 MYOM3Q5VTT5 1437 aa16■□□□□ 0.15
TPM1-221ENST00000559831 PREX2Q70Z35 1606 aa15.98■□□□□ 0.15
TPM1-221ENST00000559831 CDC42BPBQ9Y5S2 1711 aa15.98■□□□□ 0.15
TPM1-221ENST00000559831 DIP2BQ9P265 1576 aa15.97■□□□□ 0.15
TPM1-221ENST00000559831 GPATCH8Q9UKJ3 1502 aaKnown RBP15.97■□□□□ 0.15
TPM1-221ENST00000559831 FGD6Q6ZV73 1430 aa15.96■□□□□ 0.15
TPM1-221ENST00000559831 PTPN23Q9H3S7 1636 aa15.96■□□□□ 0.15
TPM1-221ENST00000559831 KIF13AQ9H1H9 1805 aa15.96■□□□□ 0.14
TPM1-221ENST00000559831 TRIM26Q12899 539 aaPredicted RBP15.95■□□□□ 0.14
TPM1-221ENST00000559831 RRBP1Q9P2E9 1410 aaKnown RBP15.94■□□□□ 0.14
TPM1-221ENST00000559831 ARHGAP5Q13017 1502 aa15.94■□□□□ 0.14
TPM1-221ENST00000559831 GLI2P10070 1586 aa15.94■□□□□ 0.14
TPM1-221ENST00000559831 TSPOAP1O95153 1857 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms