RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 RUSC2Q8N2Y8 1516 aa19.83■□□□□ 0.77
HERC1-204ENST00000559715 JPH4Q96JJ6 628 aa19.82■□□□□ 0.76
HERC1-204ENST00000559715 IGF1RP08069 1367 aa19.76■□□□□ 0.75
HERC1-204ENST00000559715 ADCY10Q96PN6 1610 aa19.69■□□□□ 0.74
HERC1-204ENST00000559715 KIAA0586Q9BVV6 1533 aa19.69■□□□□ 0.74
HERC1-204ENST00000559715 CUL7Q14999 1698 aa19.67■□□□□ 0.74
HERC1-204ENST00000559715 ABCC10Q5T3U5 1492 aa19.66■□□□□ 0.74
HERC1-204ENST00000559715 MAPKBP1O60336 1514 aa19.66■□□□□ 0.74
HERC1-204ENST00000559715 KIF27Q86VH2 1401 aa19.65■□□□□ 0.74
HERC1-204ENST00000559715 DIP2BQ9P265 1576 aa19.61■□□□□ 0.73
HERC1-204ENST00000559715 FAM69CQ0P6D2 419 aa19.57■□□□□ 0.72
HERC1-204ENST00000559715 CARMIL1Q5VZK9 1371 aa19.56■□□□□ 0.72
HERC1-204ENST00000559715 NPM1P06748 294 aaKnown RBP eCLIP19.51■□□□□ 0.71
HERC1-204ENST00000559715 PTPRGP23470 1445 aa19.49■□□□□ 0.71
HERC1-204ENST00000559715 TSPOAP1O95153 1857 aa19.48■□□□□ 0.71
HERC1-204ENST00000559715 IQGAP2Q13576 1575 aa19.47■□□□□ 0.71
HERC1-204ENST00000559715 DISP1Q96F81 1524 aa19.46■□□□□ 0.71
HERC1-204ENST00000559715 TNIKQ9UKE5 1360 aa19.44■□□□□ 0.7
HERC1-204ENST00000559715 ABCC2Q92887 1545 aa19.44■□□□□ 0.7
HERC1-204ENST00000559715 PPRC1Q5VV67 1664 aaKnown RBP19.43■□□□□ 0.7
HERC1-204ENST00000559715 KDM6BO15054 1643 aa19.42■□□□□ 0.7
HERC1-204ENST00000559715 UHRF1BP1LA0JNW5 1464 aa19.41■□□□□ 0.7
HERC1-204ENST00000559715 CARMIL2Q6F5E8 1435 aa19.41■□□□□ 0.7
HERC1-204ENST00000559715 GLI2P10070 1586 aa19.38■□□□□ 0.69
HERC1-204ENST00000559715 UGGT2Q9NYU1 1516 aa19.38■□□□□ 0.69
HERC1-204ENST00000559715 ASXL2Q76L83 1435 aa19.37■□□□□ 0.69
HERC1-204ENST00000559715 KDM4FA0A1W2PPD8 638 aa19.36■□□□□ 0.69
HERC1-204ENST00000559715 RAPGEF2Q9Y4G8 1499 aa19.35■□□□□ 0.69
HERC1-204ENST00000559715 UACAQ9BZF9 1416 aa19.35■□□□□ 0.69
HERC1-204ENST00000559715 TTBK1Q5TCY1 1321 aaPredicted RBP19.35■□□□□ 0.69
HERC1-204ENST00000559715 KDM5BQ9UGL1 1544 aa19.35■□□□□ 0.69
HERC1-204ENST00000559715 PLB1Q6P1J6 1458 aa19.34■□□□□ 0.69
HERC1-204ENST00000559715 KIAA0556O60303 1618 aa19.32■□□□□ 0.68
HERC1-204ENST00000559715 COL17A1Q9UMD9 1497 aaPredicted RBP19.3■□□□□ 0.68
HERC1-204ENST00000559715 ZCCHC11Q5TAX3 1644 aaKnown RBP19.29■□□□□ 0.68
HERC1-204ENST00000559715 MAP3K4Q9Y6R4 1608 aa19.29■□□□□ 0.68
HERC1-204ENST00000559715 EPRSP07814 1512 aaKnown RBP19.28■□□□□ 0.68
HERC1-204ENST00000559715 CTTNBP2Q8WZ74 1663 aa19.25■□□□□ 0.67
HERC1-204ENST00000559715 PRXQ9BXM0 1461 aa19.21■□□□□ 0.67
HERC1-204ENST00000559715 ABCA8O94911 1581 aa19.19■□□□□ 0.66
HERC1-204ENST00000559715 WDR7Q9Y4E6 1490 aa19.15■□□□□ 0.66
HERC1-204ENST00000559715 ADGRL1O94910 1474 aa19.11■□□□□ 0.65
HERC1-204ENST00000559715 TEX14Q8IWB6 1497 aa19.11■□□□□ 0.65
HERC1-204ENST00000559715 GOLGA3Q08378 1498 aa19.1■□□□□ 0.65
HERC1-204ENST00000559715 CFAP43Q8NDM7 1665 aa19.08■□□□□ 0.65
HERC1-204ENST00000559715 MAGI3Q5TCQ9 1506 aa19.08■□□□□ 0.64
HERC1-204ENST00000559715 CD109Q6YHK3 1445 aa19.03■□□□□ 0.64
HERC1-204ENST00000559715 ATP10BO94823 1461 aa19.02■□□□□ 0.63
HERC1-204ENST00000559715 SAMD9Q5K651 1589 aa19.01■□□□□ 0.63
HERC1-204ENST00000559715 KCNH8Q96L42 1107 aa19■□□□□ 0.63
HERC1-204ENST00000559715 ARAP3Q8WWN8 1544 aa18.95■□□□□ 0.62
HERC1-204ENST00000559715 P3H3Q8IVL6 736 aa18.95■□□□□ 0.62
HERC1-204ENST00000559715 CSRNP3Q8WYN3 585 aa18.95■□□□□ 0.62
HERC1-204ENST00000559715 ABCA9Q8IUA7 1624 aa18.94■□□□□ 0.62
HERC1-204ENST00000559715 ARID3CA6NKF2 412 aa18.91■□□□□ 0.62
HERC1-204ENST00000559715 HECW2Q9P2P5 1572 aa18.9■□□□□ 0.62
HERC1-204ENST00000559715 KIF21BO75037 1637 aa18.9■□□□□ 0.62
HERC1-204ENST00000559715 RAPGEF6Q8TEU7 1601 aa18.9■□□□□ 0.62
HERC1-204ENST00000559715 NUP153P49790 1475 aaKnown RBP18.88■□□□□ 0.61
HERC1-204ENST00000559715 ILDR1Q86SU0 546 aaPredicted RBP18.83■□□□□ 0.6
HERC1-204ENST00000559715 FRMPD1Q5SYB0 1578 aa18.83■□□□□ 0.6
HERC1-204ENST00000559715 PHLDB1Q86UU1 1377 aa18.81■□□□□ 0.6
HERC1-204ENST00000559715 ADAMTSL3P82987 1691 aa18.81■□□□□ 0.6
HERC1-204ENST00000559715 EEA1Q15075 1411 aa18.81■□□□□ 0.6
HERC1-204ENST00000559715 NEO1Q92859 1461 aa18.8■□□□□ 0.6
HERC1-204ENST00000559715 FHOD3Q2V2M9 1422 aa18.8■□□□□ 0.6
HERC1-204ENST00000559715 RAPGEF3O95398 923 aa18.79■□□□□ 0.6
HERC1-204ENST00000559715 RICTORQ6R327 1708 aa18.74■□□□□ 0.59
HERC1-204ENST00000559715 FAM9AQ8IZU1 332 aaPredicted RBP18.73■□□□□ 0.59
HERC1-204ENST00000559715 BCORL1Q5H9F3 1711 aa18.72■□□□□ 0.59
HERC1-204ENST00000559715 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.72■□□□□ 0.59
HERC1-204ENST00000559715 PTPRMP28827 1452 aa18.71■□□□□ 0.59
HERC1-204ENST00000559715 RANGAP1P46060 587 aaPredicted RBP18.71■□□□□ 0.59
HERC1-204ENST00000559715 EFCAB5A4FU69 1503 aa18.7■□□□□ 0.58
HERC1-204ENST00000559715 SIGLEC1Q9BZZ2 1709 aa18.69■□□□□ 0.58
HERC1-204ENST00000559715 TTC37Q6PGP7 1564 aa18.69■□□□□ 0.58
HERC1-204ENST00000559715 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.68■□□□□ 0.58
HERC1-204ENST00000559715 HNRNPUL2Q1KMD3 747 aaKnown RBP18.68■□□□□ 0.58
HERC1-204ENST00000559715 MADDQ8WXG6 1647 aa18.67■□□□□ 0.58
HERC1-204ENST00000559715 AKNAQ7Z591 1439 aa18.66■□□□□ 0.58
HERC1-204ENST00000559715 ARHGEF40Q8TER5 1519 aa18.66■□□□□ 0.58
HERC1-204ENST00000559715 PLEKHD1A6NEE1 506 aa18.66■□□□□ 0.58
HERC1-204ENST00000559715 CDK13Q14004 1512 aaKnown RBP18.65■□□□□ 0.58
HERC1-204ENST00000559715 FANCAO15360 1455 aa18.65■□□□□ 0.58
HERC1-204ENST00000559715 DENND4BO75064 1496 aaPredicted RBP18.64■□□□□ 0.57
HERC1-204ENST00000559715 ZMYM4Q5VZL5 1548 aa18.63■□□□□ 0.57
HERC1-204ENST00000559715 CFAP74Q9C0B2 1584 aa18.61■□□□□ 0.57
HERC1-204ENST00000559715 ARHGAP35Q9NRY4 1499 aa18.59■□□□□ 0.57
HERC1-204ENST00000559715 YEATS2Q9ULM3 1422 aa18.59■□□□□ 0.57
HERC1-204ENST00000559715 RIMS1Q86UR5 1692 aaKnown RBP18.58■□□□□ 0.57
HERC1-204ENST00000559715 LMTK3Q96Q04 1460 aa18.58■□□□□ 0.56
HERC1-204ENST00000559715 PLCH2O75038 1416 aa18.57■□□□□ 0.56
HERC1-204ENST00000559715 LRRIQ1Q96JM4 1722 aa18.57■□□□□ 0.56
HERC1-204ENST00000559715 HECW1Q76N89 1606 aa18.56■□□□□ 0.56
HERC1-204ENST00000559715 PCF11O94913 1555 aaKnown RBP18.55■□□□□ 0.56
HERC1-204ENST00000559715 ZFYVE16Q7Z3T8 1539 aa18.54■□□□□ 0.56
HERC1-204ENST00000559715 ARID4BQ4LE39 1312 aaPredicted RBP18.53■□□□□ 0.56
HERC1-204ENST00000559715 MAGI2Q86UL8 1455 aa18.53■□□□□ 0.56
HERC1-204ENST00000559715 KIF14Q15058 1648 aa18.53■□□□□ 0.56
HERC1-204ENST00000559715 POGZQ7Z3K3 1410 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms