RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 ADCY10Q96PN6 1610 aa23.16■■□□□ 1.3
TPM1-220ENST00000559556 JPH4Q96JJ6 628 aa23.14■■□□□ 1.29
TPM1-220ENST00000559556 KIF27Q86VH2 1401 aa23.13■■□□□ 1.29
TPM1-220ENST00000559556 KIAA0586Q9BVV6 1533 aa23.12■■□□□ 1.29
TPM1-220ENST00000559556 MAPKBP1O60336 1514 aa23.1■■□□□ 1.29
TPM1-220ENST00000559556 IGF1RP08069 1367 aa23.08■■□□□ 1.29
TPM1-220ENST00000559556 DIP2BQ9P265 1576 aa23.08■■□□□ 1.29
TPM1-220ENST00000559556 TSPOAP1O95153 1857 aa23.05■■□□□ 1.28
TPM1-220ENST00000559556 ABCC10Q5T3U5 1492 aa23.01■■□□□ 1.27
TPM1-220ENST00000559556 IQGAP2Q13576 1575 aa22.99■■□□□ 1.27
TPM1-220ENST00000559556 CARMIL1Q5VZK9 1371 aa22.93■■□□□ 1.26
TPM1-220ENST00000559556 AEBP2Q6ZN18 517 aaPredicted RBP22.91■■□□□ 1.26
TPM1-220ENST00000559556 CTTNBP2Q8WZ74 1663 aa22.9■■□□□ 1.26
TPM1-220ENST00000559556 NPM1P06748 294 aaKnown RBP eCLIP22.89■■□□□ 1.25
TPM1-220ENST00000559556 KDM6BO15054 1643 aa22.87■■□□□ 1.25
TPM1-220ENST00000559556 CARMIL2Q6F5E8 1435 aa22.85■■□□□ 1.25
TPM1-220ENST00000559556 FAM69CQ0P6D2 419 aa22.85■■□□□ 1.25
TPM1-220ENST00000559556 PPRC1Q5VV67 1664 aaKnown RBP22.84■■□□□ 1.25
TPM1-220ENST00000559556 PTPRGP23470 1445 aa22.83■■□□□ 1.25
TPM1-220ENST00000559556 ABCC2Q92887 1545 aa22.82■■□□□ 1.24
TPM1-220ENST00000559556 TNIKQ9UKE5 1360 aa22.81■■□□□ 1.24
TPM1-220ENST00000559556 DISP1Q96F81 1524 aa22.81■■□□□ 1.24
TPM1-220ENST00000559556 UGGT2Q9NYU1 1516 aa22.81■■□□□ 1.24
TPM1-220ENST00000559556 KIAA0556O60303 1618 aa22.79■■□□□ 1.24
TPM1-220ENST00000559556 UHRF1BP1LA0JNW5 1464 aa22.79■■□□□ 1.24
TPM1-220ENST00000559556 RAPGEF2Q9Y4G8 1499 aa22.79■■□□□ 1.24
TPM1-220ENST00000559556 GLI2P10070 1586 aa22.77■■□□□ 1.24
TPM1-220ENST00000559556 ZCCHC11Q5TAX3 1644 aaKnown RBP22.76■■□□□ 1.23
TPM1-220ENST00000559556 MAP3K4Q9Y6R4 1608 aa22.72■■□□□ 1.23
TPM1-220ENST00000559556 PLB1Q6P1J6 1458 aa22.72■■□□□ 1.23
TPM1-220ENST00000559556 ASXL2Q76L83 1435 aa22.71■■□□□ 1.23
TPM1-220ENST00000559556 KDM5BQ9UGL1 1544 aa22.69■■□□□ 1.22
TPM1-220ENST00000559556 UACAQ9BZF9 1416 aa22.69■■□□□ 1.22
TPM1-220ENST00000559556 TTBK1Q5TCY1 1321 aaPredicted RBP22.65■■□□□ 1.22
TPM1-220ENST00000559556 EPRSP07814 1512 aaKnown RBP22.61■■□□□ 1.21
TPM1-220ENST00000559556 CFAP43Q8NDM7 1665 aa22.58■■□□□ 1.2
TPM1-220ENST00000559556 ABCA8O94911 1581 aa22.56■■□□□ 1.2
TPM1-220ENST00000559556 GOLGA3Q08378 1498 aa22.56■■□□□ 1.2
TPM1-220ENST00000559556 PRXQ9BXM0 1461 aa22.54■■□□□ 1.2
TPM1-220ENST00000559556 TEX14Q8IWB6 1497 aa22.52■■□□□ 1.2
TPM1-220ENST00000559556 WDR7Q9Y4E6 1490 aa22.52■■□□□ 1.2
TPM1-220ENST00000559556 KDM4FA0A1W2PPD8 638 aa22.47■■□□□ 1.19
TPM1-220ENST00000559556 COL17A1Q9UMD9 1497 aaPredicted RBP22.46■■□□□ 1.19
TPM1-220ENST00000559556 SAMD9Q5K651 1589 aa22.43■■□□□ 1.18
TPM1-220ENST00000559556 ADGRL1O94910 1474 aa22.4■■□□□ 1.18
TPM1-220ENST00000559556 MAGI3Q5TCQ9 1506 aa22.39■■□□□ 1.17
TPM1-220ENST00000559556 RAPGEF6Q8TEU7 1601 aa22.35■■□□□ 1.17
TPM1-220ENST00000559556 ABCA9Q8IUA7 1624 aa22.33■■□□□ 1.17
TPM1-220ENST00000559556 CD109Q6YHK3 1445 aa22.31■■□□□ 1.16
TPM1-220ENST00000559556 KIF21BO75037 1637 aa22.29■■□□□ 1.16
TPM1-220ENST00000559556 ATP10BO94823 1461 aa22.27■■□□□ 1.16
TPM1-220ENST00000559556 EEA1Q15075 1411 aa22.24■■□□□ 1.15
TPM1-220ENST00000559556 ARAP3Q8WWN8 1544 aa22.22■■□□□ 1.15
TPM1-220ENST00000559556 CSRNP3Q8WYN3 585 aa22.21■■□□□ 1.15
TPM1-220ENST00000559556 KCNH8Q96L42 1107 aa22.21■■□□□ 1.15
TPM1-220ENST00000559556 HECW2Q9P2P5 1572 aa22.18■■□□□ 1.14
TPM1-220ENST00000559556 P3H3Q8IVL6 736 aa22.16■■□□□ 1.14
TPM1-220ENST00000559556 FAM9AQ8IZU1 332 aaPredicted RBP22.16■■□□□ 1.14
TPM1-220ENST00000559556 NUP153P49790 1475 aaKnown RBP22.15■■□□□ 1.14
TPM1-220ENST00000559556 EFCAB5A4FU69 1503 aa22.15■■□□□ 1.14
TPM1-220ENST00000559556 FRMPD1Q5SYB0 1578 aa22.13■■□□□ 1.13
TPM1-220ENST00000559556 RICTORQ6R327 1708 aa22.13■■□□□ 1.13
TPM1-220ENST00000559556 CFAP74Q9C0B2 1584 aa22.11■■□□□ 1.13
TPM1-220ENST00000559556 NEO1Q92859 1461 aa22.1■■□□□ 1.13
TPM1-220ENST00000559556 ARID3CA6NKF2 412 aa22.1■■□□□ 1.13
TPM1-220ENST00000559556 ADAMTSL3P82987 1691 aa22.1■■□□□ 1.13
TPM1-220ENST00000559556 PHLDB1Q86UU1 1377 aa22.1■■□□□ 1.13
TPM1-220ENST00000559556 FHOD3Q2V2M9 1422 aa22.09■■□□□ 1.13
TPM1-220ENST00000559556 BCORL1Q5H9F3 1711 aa22.07■■□□□ 1.12
TPM1-220ENST00000559556 TTC37Q6PGP7 1564 aa22.04■■□□□ 1.12
TPM1-220ENST00000559556 ARHGEF40Q8TER5 1519 aa22.02■■□□□ 1.12
TPM1-220ENST00000559556 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.01■■□□□ 1.11
TPM1-220ENST00000559556 MYO5CQ9NQX4 1742 aa21.99■■□□□ 1.11
TPM1-220ENST00000559556 LRRIQ1Q96JM4 1722 aa21.98■■□□□ 1.11
TPM1-220ENST00000559556 MADDQ8WXG6 1647 aa21.98■■□□□ 1.11
TPM1-220ENST00000559556 HECW1Q76N89 1606 aa21.96■■□□□ 1.11
TPM1-220ENST00000559556 CDK13Q14004 1512 aaKnown RBP21.96■■□□□ 1.11
TPM1-220ENST00000559556 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.95■■□□□ 1.1
TPM1-220ENST00000559556 HNRNPUL2Q1KMD3 747 aaKnown RBP21.95■■□□□ 1.1
TPM1-220ENST00000559556 ZMYM4Q5VZL5 1548 aa21.95■■□□□ 1.1
TPM1-220ENST00000559556 RIMS1Q86UR5 1692 aaKnown RBP21.94■■□□□ 1.1
TPM1-220ENST00000559556 FANCAO15360 1455 aa21.93■■□□□ 1.1
TPM1-220ENST00000559556 RANGAP1P46060 587 aaPredicted RBP21.93■■□□□ 1.1
TPM1-220ENST00000559556 SIGLEC1Q9BZZ2 1709 aa21.93■■□□□ 1.1
TPM1-220ENST00000559556 RAPGEF3O95398 923 aa21.92■■□□□ 1.1
TPM1-220ENST00000559556 PTPRMP28827 1452 aa21.91■■□□□ 1.1
TPM1-220ENST00000559556 DENND4BO75064 1496 aaPredicted RBP21.9■■□□□ 1.1
TPM1-220ENST00000559556 AKNAQ7Z591 1439 aa21.89■■□□□ 1.09
TPM1-220ENST00000559556 PLEKHD1A6NEE1 506 aa21.88■■□□□ 1.09
TPM1-220ENST00000559556 FER1L4A9Z1Z3 1794 aa21.88■■□□□ 1.09
TPM1-220ENST00000559556 ARHGAP35Q9NRY4 1499 aa21.85■■□□□ 1.09
TPM1-220ENST00000559556 KIF14Q15058 1648 aa21.85■■□□□ 1.09
TPM1-220ENST00000559556 FMN1Q68DA7 1419 aa21.84■■□□□ 1.09
TPM1-220ENST00000559556 ZFYVE16Q7Z3T8 1539 aa21.84■■□□□ 1.09
TPM1-220ENST00000559556 ILDR1Q86SU0 546 aaPredicted RBP21.83■■□□□ 1.09
TPM1-220ENST00000559556 CDC42BPBQ9Y5S2 1711 aa21.81■■□□□ 1.08
TPM1-220ENST00000559556 PCF11O94913 1555 aaKnown RBP21.81■■□□□ 1.08
TPM1-220ENST00000559556 MAGI2Q86UL8 1455 aa21.79■■□□□ 1.08
TPM1-220ENST00000559556 PLCH2O75038 1416 aa21.78■■□□□ 1.08
TPM1-220ENST00000559556 POGZQ7Z3K3 1410 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms