RNA–Protein interactions for RNA: ENST00000559329.5

USP8-208, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,917 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-208ENST00000559329 TIAM1Q13009 1591 aa24.17■■□□□ 1.46
USP8-208ENST00000559329 FHAD1B1AJZ9 1412 aa24.16■■□□□ 1.46
USP8-208ENST00000559329 RRBP1Q9P2E9 1410 aaKnown RBP24.14■■□□□ 1.46
USP8-208ENST00000559329 WDR62O43379 1518 aa24.13■■□□□ 1.45
USP8-208ENST00000559329 PBRM1Q86U86 1689 aa24.12■■□□□ 1.45
USP8-208ENST00000559329 PCF11O94913 1555 aaKnown RBP24.12■■□□□ 1.45
USP8-208ENST00000559329 HNRNPUL2Q1KMD3 747 aaKnown RBP24.1■■□□□ 1.45
USP8-208ENST00000559329 CFAP43Q8NDM7 1665 aa24.1■■□□□ 1.45
USP8-208ENST00000559329 FHOD3Q2V2M9 1422 aa24.08■■□□□ 1.45
USP8-208ENST00000559329 AQRO60306 1485 aaKnown RBP eCLIP24.08■■□□□ 1.453e-6■■■□□ 14.6
USP8-208ENST00000559329 SAMD9Q5K651 1589 aa24.08■■□□□ 1.45
USP8-208ENST00000559329 FYCO1Q9BQS8 1478 aa24.06■■□□□ 1.44
USP8-208ENST00000559329 LRRC9Q6ZRR7 1453 aa24.05■■□□□ 1.44
USP8-208ENST00000559329 IFT140Q96RY7 1462 aa24.04■■□□□ 1.44
USP8-208ENST00000559329 ADAMTS12P58397 1594 aa24.04■■□□□ 1.44
USP8-208ENST00000559329 CASKIN1Q8WXD9 1431 aa24.03■■□□□ 1.44
USP8-208ENST00000559329 P3H3Q8IVL6 736 aa24■■□□□ 1.43
USP8-208ENST00000559329 GRIN2BQ13224 1484 aa23.99■■□□□ 1.43
USP8-208ENST00000559329 FMN1Q68DA7 1419 aa23.98■■□□□ 1.43
USP8-208ENST00000559329 CCNB3Q8WWL7 1395 aa23.98■■□□□ 1.43
USP8-208ENST00000559329 SNAPC4Q5SXM2 1469 aa23.97■■□□□ 1.43
USP8-208ENST00000559329 THOC2Q8NI27 1593 aaKnown RBP23.95■■□□□ 1.42
USP8-208ENST00000559329 ZNF608Q9ULD9 1512 aaPredicted RBP23.94■■□□□ 1.42
USP8-208ENST00000559329 ERCC6Q03468 1493 aa23.9■■□□□ 1.42
USP8-208ENST00000559329 PHLDB1Q86UU1 1377 aa23.88■■□□□ 1.41
USP8-208ENST00000559329 IQGAP2Q13576 1575 aa23.88■■□□□ 1.41
USP8-208ENST00000559329 EIF4G3O43432 1585 aaKnown RBP23.86■■□□□ 1.41
USP8-208ENST00000559329 LRRIQ1Q96JM4 1722 aa23.84■■□□□ 1.41
USP8-208ENST00000559329 DHX57Q6P158 1386 aaKnown RBP23.79■■□□□ 1.4
USP8-208ENST00000559329 UGGT2Q9NYU1 1516 aa23.78■■□□□ 1.4
USP8-208ENST00000559329 CLSPNQ9HAW4 1339 aa23.77■■□□□ 1.4
USP8-208ENST00000559329 ATP1B4Q9UN42 357 aaPredicted RBP23.76■■□□□ 1.39
USP8-208ENST00000559329 GRIN2AQ12879 1464 aa23.73■■□□□ 1.39
USP8-208ENST00000559329 MAGI1Q96QZ7 1491 aaPredicted RBP23.73■■□□□ 1.39
USP8-208ENST00000559329 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.73■■□□□ 1.39
USP8-208ENST00000559329 KIAA0586Q9BVV6 1533 aa23.72■■□□□ 1.39
USP8-208ENST00000559329 HECW1Q76N89 1606 aa23.69■■□□□ 1.38
USP8-208ENST00000559329 CCDC18Q5T9S5 1454 aa23.69■■□□□ 1.38
USP8-208ENST00000559329 EHBP1L1Q8N3D4 1523 aa23.68■■□□□ 1.38
USP8-208ENST00000559329 MTUS2Q5JR59 1369 aa23.66■■□□□ 1.38
USP8-208ENST00000559329 KIAA0556O60303 1618 aa23.65■■□□□ 1.38
USP8-208ENST00000559329 FGD6Q6ZV73 1430 aa23.65■■□□□ 1.38
USP8-208ENST00000559329 DISP1Q96F81 1524 aa23.64■■□□□ 1.37
USP8-208ENST00000559329 SYNJ2O15056 1496 aa23.64■■□□□ 1.37
USP8-208ENST00000559329 RAB3GAP2Q9H2M9 1393 aa23.63■■□□□ 1.37
USP8-208ENST00000559329 ITGAEP38570 1179 aa23.63■■□□□ 1.37
USP8-208ENST00000559329 SUPT6HQ7KZ85 1726 aaKnown RBP23.63■■□□□ 1.37
USP8-208ENST00000559329 ARHGEF11O15085 1522 aa23.63■■□□□ 1.37
USP8-208ENST00000559329 MAGI3Q5TCQ9 1506 aa23.63■■□□□ 1.37
USP8-208ENST00000559329 NCOA2Q15596 1464 aa23.62■■□□□ 1.37
USP8-208ENST00000559329 SETD5Q9C0A6 1442 aa23.61■■□□□ 1.37
USP8-208ENST00000559329 EPRSP07814 1512 aaKnown RBP23.6■■□□□ 1.37
USP8-208ENST00000559329 FAM50AQ14320 339 aaKnown RBP23.59■■□□□ 1.37
USP8-208ENST00000559329 CEP170Q5SW79 1584 aa23.59■■□□□ 1.37
USP8-208ENST00000559329 MYOM3Q5VTT5 1437 aa23.57■■□□□ 1.36
USP8-208ENST00000559329 ZNF316A6NFI3 1004 aaPredicted RBP23.54■■□□□ 1.36
USP8-208ENST00000559329 NUP160Q12769 1436 aa23.54■■□□□ 1.36
USP8-208ENST00000559329 MAPKBP1O60336 1514 aa23.52■■□□□ 1.36
USP8-208ENST00000559329 CDK13Q14004 1512 aaKnown RBP23.51■■□□□ 1.35
USP8-208ENST00000559329 CHMP7Q8WUX9 453 aaPredicted RBP23.49■■□□□ 1.35
USP8-208ENST00000559329 DIEXFQ68CQ4 756 aaKnown RBP23.48■■□□□ 1.35
USP8-208ENST00000559329 RAPGEF6Q8TEU7 1601 aa23.47■■□□□ 1.35
USP8-208ENST00000559329 PTPN23Q9H3S7 1636 aa23.47■■□□□ 1.35
USP8-208ENST00000559329 NUP153P49790 1475 aaKnown RBP23.46■■□□□ 1.35
USP8-208ENST00000559329 TCOF1Q13428 1488 aaKnown RBP23.46■■□□□ 1.35
USP8-208ENST00000559329 PTPRKQ15262 1439 aa23.45■■□□□ 1.34
USP8-208ENST00000559329 HFM1A2PYH4 1435 aa23.41■■□□□ 1.34
USP8-208ENST00000559329 MIA2Q96PC5 1412 aa23.38■■□□□ 1.33
USP8-208ENST00000559329 CARMIL2Q6F5E8 1435 aa23.36■■□□□ 1.33
USP8-208ENST00000559329 FBLN2P98095 1184 aa23.35■■□□□ 1.33
USP8-208ENST00000559329 JPH4Q96JJ6 628 aa23.33■■□□□ 1.33
USP8-208ENST00000559329 NAIPQ13075 1403 aa23.33■■□□□ 1.33
USP8-208ENST00000559329 PLB1Q6P1J6 1458 aa23.31■■□□□ 1.32
USP8-208ENST00000559329 AKNAQ7Z591 1439 aa23.29■■□□□ 1.32
USP8-208ENST00000559329 ARID3CA6NKF2 412 aa23.28■■□□□ 1.32
USP8-208ENST00000559329 GCC2Q8IWJ2 1684 aa23.27■■□□□ 1.32
USP8-208ENST00000559329 UACAQ9BZF9 1416 aa23.27■■□□□ 1.32
USP8-208ENST00000559329 ABCA8O94911 1581 aa23.26■■□□□ 1.31
USP8-208ENST00000559329 TROQ12816 1431 aaPredicted RBP23.25■■□□□ 1.31
USP8-208ENST00000559329 ADCY10Q96PN6 1610 aa23.25■■□□□ 1.31
USP8-208ENST00000559329 CDK11AQ9UQ88 783 aaPredicted RBP23.23■■□□□ 1.31
USP8-208ENST00000559329 CHD1O14646 1710 aa23.23■■□□□ 1.31
USP8-208ENST00000559329 PRG4Q92954 1404 aaPredicted RBP23.21■■□□□ 1.31
USP8-208ENST00000559329 DNMT1P26358 1616 aaKnown RBP23.18■■□□□ 1.3
USP8-208ENST00000559329 TIMELESSQ9UNS1 1208 aa23.18■■□□□ 1.3
USP8-208ENST00000559329 KIF14Q15058 1648 aa23.16■■□□□ 1.3
USP8-208ENST00000559329 SIN3AQ96ST3 1273 aa23.16■■□□□ 1.3
USP8-208ENST00000559329 ITSN2Q9NZM3 1697 aa23.16■■□□□ 1.3
USP8-208ENST00000559329 SHROOM2Q13796 1616 aa23.16■■□□□ 1.3
USP8-208ENST00000559329 DAPK1P53355 1430 aa23.15■■□□□ 1.3
USP8-208ENST00000559329 ROCK1Q13464 1354 aa23.13■■□□□ 1.29
USP8-208ENST00000559329 KDM6BO15054 1643 aa23.13■■□□□ 1.29
USP8-208ENST00000559329 ABCC5O15440 1437 aa23.12■■□□□ 1.29
USP8-208ENST00000559329 GPATCH8Q9UKJ3 1502 aaKnown RBP23.12■■□□□ 1.29
USP8-208ENST00000559329 ATP10BO94823 1461 aa23.12■■□□□ 1.29
USP8-208ENST00000559329 RRP7BPQ9NSQ0 103 aa23.1■■□□□ 1.29
USP8-208ENST00000559329 CHIC2Q9UKJ5 165 aa23.09■■□□□ 1.29
USP8-208ENST00000559329 CAMSAP2Q08AD1 1489 aa23.08■■□□□ 1.29
USP8-208ENST00000559329 NEUROD1Q13562 356 aa23.08■■□□□ 1.28
USP8-208ENST00000559329 DENND4BO75064 1496 aaPredicted RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms