RNA–Protein interactions for RNA: ENST00000559274.1

MARK3-218, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 1,053 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-218ENST00000559274 CLASP1Q7Z460 1538 aa15.85■□□□□ 0.13
MARK3-218ENST00000559274 ADAMTS12P58397 1594 aa15.82■□□□□ 0.12
MARK3-218ENST00000559274 SCAF1Q9H7N4 1312 aaKnown RBP15.81■□□□□ 0.12
MARK3-218ENST00000559274 NUP160Q12769 1436 aa15.8■□□□□ 0.12
MARK3-218ENST00000559274 ARAP1Q96P48 1450 aa15.78■□□□□ 0.12
MARK3-218ENST00000559274 TRHP20396 242 aaPredicted RBP15.76■□□□□ 0.11
MARK3-218ENST00000559274 IGF1RP08069 1367 aa15.75■□□□□ 0.11
MARK3-218ENST00000559274 JPH4Q96JJ6 628 aa15.75■□□□□ 0.11
MARK3-218ENST00000559274 MAPK8IP2Q13387 824 aaPredicted RBP15.72■□□□□ 0.11
MARK3-218ENST00000559274 CUL7Q14999 1698 aa15.72■□□□□ 0.11
MARK3-218ENST00000559274 CARMIL1Q5VZK9 1371 aa15.71■□□□□ 0.11
MARK3-218ENST00000559274 NPM1P06748 294 aaKnown RBP eCLIP15.69■□□□□ 0.1
MARK3-218ENST00000559274 CEP170Q5SW79 1584 aa15.69■□□□□ 0.1
MARK3-218ENST00000559274 FAM9AQ8IZU1 332 aaPredicted RBP15.67■□□□□ 0.1
MARK3-218ENST00000559274 KIAA0586Q9BVV6 1533 aa15.67■□□□□ 0.1
MARK3-218ENST00000559274 PRG4Q92954 1404 aaPredicted RBP15.67■□□□□ 0.1
MARK3-218ENST00000559274 PPP4R3CPQ6ZMV5 832 aa15.65■□□□□ 0.1
MARK3-218ENST00000559274 DMRT2Q9Y5R5 561 aa15.64■□□□□ 0.09
MARK3-218ENST00000559274 SHROOM2Q13796 1616 aa15.64■□□□□ 0.09
MARK3-218ENST00000559274 CARMIL2Q6F5E8 1435 aa15.62■□□□□ 0.09
MARK3-218ENST00000559274 RAPGEF2Q9Y4G8 1499 aa15.59■□□□□ 0.09
MARK3-218ENST00000559274 RUSC2Q8N2Y8 1516 aa15.57■□□□□ 0.08
MARK3-218ENST00000559274 PTPRGP23470 1445 aa15.52■□□□□ 0.08
MARK3-218ENST00000559274 TNIKQ9UKE5 1360 aa15.51■□□□□ 0.07
MARK3-218ENST00000559274 EEA1Q15075 1411 aa15.51■□□□□ 0.07
MARK3-218ENST00000559274 ERCC6L2Q5T890 1561 aa15.5■□□□□ 0.07
MARK3-218ENST00000559274 IQGAP2Q13576 1575 aa15.49■□□□□ 0.07
MARK3-218ENST00000559274 CSRNP3Q8WYN3 585 aa15.47■□□□□ 0.07
MARK3-218ENST00000559274 GOLGA3Q08378 1498 aa15.46■□□□□ 0.06
MARK3-218ENST00000559274 UGGT2Q9NYU1 1516 aa15.41■□□□□ 0.06
MARK3-218ENST00000559274 TTBK1Q5TCY1 1321 aaPredicted RBP15.41■□□□□ 0.06
MARK3-218ENST00000559274 PRXQ9BXM0 1461 aa15.4■□□□□ 0.06
MARK3-218ENST00000559274 FAM69CQ0P6D2 419 aa15.4■□□□□ 0.06
MARK3-218ENST00000559274 MAPKBP1O60336 1514 aa15.39■□□□□ 0.05
MARK3-218ENST00000559274 UACAQ9BZF9 1416 aa15.38■□□□□ 0.05
MARK3-218ENST00000559274 UHRF1BP1LA0JNW5 1464 aa15.37■□□□□ 0.05
MARK3-218ENST00000559274 ABCC10Q5T3U5 1492 aa15.36■□□□□ 0.05
MARK3-218ENST00000559274 PLB1Q6P1J6 1458 aa15.35■□□□□ 0.05
MARK3-218ENST00000559274 ABCC2Q92887 1545 aa15.35■□□□□ 0.05
MARK3-218ENST00000559274 DISP1Q96F81 1524 aa15.33■□□□□ 0.05
MARK3-218ENST00000559274 ADCY10Q96PN6 1610 aa15.32■□□□□ 0.04
MARK3-218ENST00000559274 CTTNBP2Q8WZ74 1663 aa15.31■□□□□ 0.04
MARK3-218ENST00000559274 KIAA0556O60303 1618 aa15.29■□□□□ 0.04
MARK3-218ENST00000559274 CNKSR2Q8WXI2 1034 aa15.28■□□□□ 0.04
MARK3-218ENST00000559274 KDM5BQ9UGL1 1544 aa15.26■□□□□ 0.03
MARK3-218ENST00000559274 ASXL2Q76L83 1435 aa15.26■□□□□ 0.03
MARK3-218ENST00000559274 DIP2BQ9P265 1576 aa15.23■□□□□ 0.03
MARK3-218ENST00000559274 UBTFP17480 764 aaKnown RBP15.22■□□□□ 0.03
MARK3-218ENST00000559274 DCAF8L1A6NGE4 600 aa15.21■□□□□ 0.03
MARK3-218ENST00000559274 KIF13AQ9H1H9 1805 aa15.21■□□□□ 0.03
MARK3-218ENST00000559274 TEX14Q8IWB6 1497 aa15.2■□□□□ 0.02
MARK3-218ENST00000559274 GLI2P10070 1586 aa15.19■□□□□ 0.02
MARK3-218ENST00000559274 KIF21BO75037 1637 aa15.17■□□□□ 0.02
MARK3-218ENST00000559274 WDR7Q9Y4E6 1490 aa15.17■□□□□ 0.02
MARK3-218ENST00000559274 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.17■□□□□ 0.02
MARK3-218ENST00000559274 HNRNPUL2Q1KMD3 747 aaKnown RBP15.17■□□□□ 0.02
MARK3-218ENST00000559274 P3H3Q8IVL6 736 aa15.17■□□□□ 0.02
MARK3-218ENST00000559274 EPRSP07814 1512 aaKnown RBP15.15■□□□□ 0.02
MARK3-218ENST00000559274 EFCAB5A4FU69 1503 aa15.14■□□□□ 0.01
MARK3-218ENST00000559274 ABCA8O94911 1581 aa15.14■□□□□ 0.01
MARK3-218ENST00000559274 ZCCHC11Q5TAX3 1644 aaKnown RBP15.14■□□□□ 0.01
MARK3-218ENST00000559274 HOXD11P31277 338 aaPredicted RBP15.13■□□□□ 0.01
MARK3-218ENST00000559274 RANGAP1P46060 587 aaPredicted RBP15.13■□□□□ 0.01
MARK3-218ENST00000559274 KCNH8Q96L42 1107 aa15.13■□□□□ 0.01
MARK3-218ENST00000559274 PLEKHD1A6NEE1 506 aa15.12■□□□□ 0.01
MARK3-218ENST00000559274 SAMD9Q5K651 1589 aa15.11■□□□□ 0.01
MARK3-218ENST00000559274 CDK11AQ9UQ88 783 aaPredicted RBP15.11■□□□□ 0.01
MARK3-218ENST00000559274 PHLDB1Q86UU1 1377 aa15.11■□□□□ 0.01
MARK3-218ENST00000559274 KDM6BO15054 1643 aa15.1■□□□□ 0.01
MARK3-218ENST00000559274 CD109Q6YHK3 1445 aa15.09■□□□□ 0.01
MARK3-218ENST00000559274 NCBP3Q53F19 620 aaKnown RBP15.09■□□□□ 0.01
MARK3-218ENST00000559274 FMN1Q68DA7 1419 aa15.09■□□□□ 0.01
MARK3-218ENST00000559274 RNF216Q9NWF9 866 aaPredicted RBP15.07■□□□□ 0
MARK3-218ENST00000559274 TSPOAP1O95153 1857 aa15.07■□□□□ 0
MARK3-218ENST00000559274 ATP10BO94823 1461 aa15.06■□□□□ 0
MARK3-218ENST00000559274 MAGI3Q5TCQ9 1506 aa15.05■□□□□ -0
MARK3-218ENST00000559274 RAPGEF6Q8TEU7 1601 aa15.05■□□□□ -0
MARK3-218ENST00000559274 MAP3K4Q9Y6R4 1608 aa15.03■□□□□ -0
MARK3-218ENST00000559274 FHOD3Q2V2M9 1422 aa15.03■□□□□ -0
MARK3-218ENST00000559274 CFAP43Q8NDM7 1665 aa15.03■□□□□ -0
MARK3-218ENST00000559274 ARID3CA6NKF2 412 aa15.02■□□□□ -0
MARK3-218ENST00000559274 ATP1B4Q9UN42 357 aaPredicted RBP15.01□□□□□ -0.01
MARK3-218ENST00000559274 EHMT2Q96KQ7 1210 aa15□□□□□ -0.01
MARK3-218ENST00000559274 NUP153P49790 1475 aaKnown RBP14.97□□□□□ -0.01
MARK3-218ENST00000559274 NPM3O75607 178 aaKnown RBP14.95□□□□□ -0.02
MARK3-218ENST00000559274 NEO1Q92859 1461 aa14.95□□□□□ -0.02
MARK3-218ENST00000559274 KCNA4P22459 653 aa14.93□□□□□ -0.02
MARK3-218ENST00000559274 PPRC1Q5VV67 1664 aaKnown RBP14.93□□□□□ -0.02
MARK3-218ENST00000559274 CLIP1P30622 1438 aa14.92□□□□□ -0.02
MARK3-218ENST00000559274 ARAP3Q8WWN8 1544 aa14.92□□□□□ -0.02
MARK3-218ENST00000559274 ABCA9Q8IUA7 1624 aa14.92□□□□□ -0.02
MARK3-218ENST00000559274 HECW1Q76N89 1606 aa14.92□□□□□ -0.02
MARK3-218ENST00000559274 ARHGAP35Q9NRY4 1499 aa14.91□□□□□ -0.02
MARK3-218ENST00000559274 EFCAB2Q5VUJ9 269 aa14.88□□□□□ -0.03
MARK3-218ENST00000559274 CCDC18Q5T9S5 1454 aa14.88□□□□□ -0.03
MARK3-218ENST00000559274 CFAP74Q9C0B2 1584 aa14.87□□□□□ -0.03
MARK3-218ENST00000559274 CACNB1Q02641 598 aaPredicted RBP14.87□□□□□ -0.03
MARK3-218ENST00000559274 COL17A1Q9UMD9 1497 aaPredicted RBP14.86□□□□□ -0.03
MARK3-218ENST00000559274 CASKIN1Q8WXD9 1431 aa14.85□□□□□ -0.03
MARK3-218ENST00000559274 FANCAO15360 1455 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms