RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 RUSC2Q8N2Y8 1516 aa28.94■■■□□ 2.22
CDC42BPB-205ENST00000559245 ADCY10Q96PN6 1610 aa28.75■■■□□ 2.19
CDC42BPB-205ENST00000559245 CUL7Q14999 1698 aa28.74■■■□□ 2.19
CDC42BPB-205ENST00000559245 MAPKBP1O60336 1514 aa28.74■■■□□ 2.19
CDC42BPB-205ENST00000559245 ABCC10Q5T3U5 1492 aa28.73■■■□□ 2.19
CDC42BPB-205ENST00000559245 NPM1P06748 294 aaKnown RBP eCLIP28.73■■■□□ 2.19
CDC42BPB-205ENST00000559245 KIAA0586Q9BVV6 1533 aa28.72■■■□□ 2.19
CDC42BPB-205ENST00000559245 FAM69CQ0P6D2 419 aa28.71■■■□□ 2.19
CDC42BPB-205ENST00000559245 IGF1RP08069 1367 aa28.7■■■□□ 2.18
CDC42BPB-205ENST00000559245 DIP2BQ9P265 1576 aa28.7■■■□□ 2.18
CDC42BPB-205ENST00000559245 KIF27Q86VH2 1401 aa28.69■■■□□ 2.18
CDC42BPB-205ENST00000559245 TSPOAP1O95153 1857 aa28.59■■■□□ 2.17
CDC42BPB-205ENST00000559245 KDM6BO15054 1643 aa28.53■■■□□ 2.16
CDC42BPB-205ENST00000559245 CARMIL1Q5VZK9 1371 aa28.51■■■□□ 2.16
CDC42BPB-205ENST00000559245 PTPRGP23470 1445 aa28.5■■■□□ 2.15
CDC42BPB-205ENST00000559245 TTBK1Q5TCY1 1321 aaPredicted RBP28.44■■■□□ 2.14
CDC42BPB-205ENST00000559245 CARMIL2Q6F5E8 1435 aa28.44■■■□□ 2.14
CDC42BPB-205ENST00000559245 IQGAP2Q13576 1575 aa28.44■■■□□ 2.14
CDC42BPB-205ENST00000559245 TNIKQ9UKE5 1360 aa28.42■■■□□ 2.14
CDC42BPB-205ENST00000559245 ABCC2Q92887 1545 aa28.4■■■□□ 2.14
CDC42BPB-205ENST00000559245 ASXL2Q76L83 1435 aa28.33■■■□□ 2.13
CDC42BPB-205ENST00000559245 PPRC1Q5VV67 1664 aaKnown RBP28.32■■■□□ 2.12
CDC42BPB-205ENST00000559245 UHRF1BP1LA0JNW5 1464 aa28.31■■■□□ 2.12
CDC42BPB-205ENST00000559245 PLB1Q6P1J6 1458 aa28.31■■■□□ 2.12
CDC42BPB-205ENST00000559245 GLI2P10070 1586 aa28.31■■■□□ 2.12
CDC42BPB-205ENST00000559245 DISP1Q96F81 1524 aa28.3■■■□□ 2.12
CDC42BPB-205ENST00000559245 KDM4FA0A1W2PPD8 638 aa28.3■■■□□ 2.12
CDC42BPB-205ENST00000559245 UACAQ9BZF9 1416 aa28.27■■■□□ 2.12
CDC42BPB-205ENST00000559245 UGGT2Q9NYU1 1516 aa28.23■■■□□ 2.11
CDC42BPB-205ENST00000559245 RAPGEF2Q9Y4G8 1499 aa28.23■■■□□ 2.11
CDC42BPB-205ENST00000559245 KDM5BQ9UGL1 1544 aa28.2■■■□□ 2.1
CDC42BPB-205ENST00000559245 KIAA0556O60303 1618 aa28.19■■■□□ 2.1
CDC42BPB-205ENST00000559245 ZCCHC11Q5TAX3 1644 aaKnown RBP28.19■■■□□ 2.1
CDC42BPB-205ENST00000559245 MAP3K4Q9Y6R4 1608 aa28.18■■■□□ 2.1
CDC42BPB-205ENST00000559245 EPRSP07814 1512 aaKnown RBP28.16■■■□□ 2.1
CDC42BPB-205ENST00000559245 CTTNBP2Q8WZ74 1663 aa28.13■■■□□ 2.09
CDC42BPB-205ENST00000559245 COL17A1Q9UMD9 1497 aaPredicted RBP28.08■■■□□ 2.09
CDC42BPB-205ENST00000559245 TEX14Q8IWB6 1497 aa28.06■■■□□ 2.08
CDC42BPB-205ENST00000559245 ADGRL1O94910 1474 aa28.04■■■□□ 2.08
CDC42BPB-205ENST00000559245 WDR7Q9Y4E6 1490 aa28.01■■■□□ 2.07
CDC42BPB-205ENST00000559245 GOLGA3Q08378 1498 aa27.96■■■□□ 2.07
CDC42BPB-205ENST00000559245 ABCA8O94911 1581 aa27.94■■■□□ 2.06
CDC42BPB-205ENST00000559245 CFAP43Q8NDM7 1665 aa27.94■■■□□ 2.06
CDC42BPB-205ENST00000559245 PRXQ9BXM0 1461 aa27.87■■■□□ 2.05
CDC42BPB-205ENST00000559245 CD109Q6YHK3 1445 aa27.86■■■□□ 2.05
CDC42BPB-205ENST00000559245 MAGI3Q5TCQ9 1506 aa27.86■■■□□ 2.05
CDC42BPB-205ENST00000559245 KCNH8Q96L42 1107 aa27.84■■■□□ 2.05
CDC42BPB-205ENST00000559245 HECW2Q9P2P5 1572 aa27.77■■■□□ 2.04
CDC42BPB-205ENST00000559245 ILDR1Q86SU0 546 aaPredicted RBP27.72■■■□□ 2.03
CDC42BPB-205ENST00000559245 KIF21BO75037 1637 aa27.7■■■□□ 2.03
CDC42BPB-205ENST00000559245 P3H3Q8IVL6 736 aa27.69■■■□□ 2.02
CDC42BPB-205ENST00000559245 FAM9AQ8IZU1 332 aaPredicted RBP27.69■■■□□ 2.02
CDC42BPB-205ENST00000559245 ATP10BO94823 1461 aa27.69■■■□□ 2.02
CDC42BPB-205ENST00000559245 ARID3CA6NKF2 412 aa27.68■■■□□ 2.02
CDC42BPB-205ENST00000559245 ARAP3Q8WWN8 1544 aa27.66■■■□□ 2.02
CDC42BPB-205ENST00000559245 SAMD9Q5K651 1589 aa27.65■■■□□ 2.02
CDC42BPB-205ENST00000559245 ABCA9Q8IUA7 1624 aa27.64■■■□□ 2.02
CDC42BPB-205ENST00000559245 RAPGEF6Q8TEU7 1601 aa27.61■■■□□ 2.01
CDC42BPB-205ENST00000559245 CSRNP3Q8WYN3 585 aa27.57■■■□□ 2
CDC42BPB-205ENST00000559245 PHLDB1Q86UU1 1377 aa27.54■■■□□ 2
CDC42BPB-205ENST00000559245 NEO1Q92859 1461 aa27.49■■□□□ 1.99
CDC42BPB-205ENST00000559245 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.48■■□□□ 1.99
CDC42BPB-205ENST00000559245 HNRNPUL2Q1KMD3 747 aaKnown RBP27.48■■□□□ 1.99
CDC42BPB-205ENST00000559245 ADAMTSL3P82987 1691 aa27.48■■□□□ 1.99
CDC42BPB-205ENST00000559245 NUP153P49790 1475 aaKnown RBP27.46■■□□□ 1.99
CDC42BPB-205ENST00000559245 RAPGEF3O95398 923 aa27.46■■□□□ 1.99
CDC42BPB-205ENST00000559245 FRMPD1Q5SYB0 1578 aa27.44■■□□□ 1.98
CDC42BPB-205ENST00000559245 FHOD3Q2V2M9 1422 aa27.41■■□□□ 1.98
CDC42BPB-205ENST00000559245 RANGAP1P46060 587 aaPredicted RBP27.41■■□□□ 1.98
CDC42BPB-205ENST00000559245 BCORL1Q5H9F3 1711 aa27.41■■□□□ 1.98
CDC42BPB-205ENST00000559245 EEA1Q15075 1411 aa27.41■■□□□ 1.98
CDC42BPB-205ENST00000559245 PTPRMP28827 1452 aa27.4■■□□□ 1.98
CDC42BPB-205ENST00000559245 RICTORQ6R327 1708 aa27.36■■□□□ 1.97
CDC42BPB-205ENST00000559245 MADDQ8WXG6 1647 aa27.34■■□□□ 1.97
CDC42BPB-205ENST00000559245 PLEKHD1A6NEE1 506 aa27.32■■□□□ 1.96
CDC42BPB-205ENST00000559245 CFAP74Q9C0B2 1584 aa27.31■■□□□ 1.96
CDC42BPB-205ENST00000559245 ARID4BQ4LE39 1312 aaPredicted RBP27.31■■□□□ 1.96
CDC42BPB-205ENST00000559245 ARHGEF40Q8TER5 1519 aa27.31■■□□□ 1.96
CDC42BPB-205ENST00000559245 DENND4BO75064 1496 aaPredicted RBP27.29■■□□□ 1.96
CDC42BPB-205ENST00000559245 EFCAB5A4FU69 1503 aa27.29■■□□□ 1.96
CDC42BPB-205ENST00000559245 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.29■■□□□ 1.96
CDC42BPB-205ENST00000559245 AKNAQ7Z591 1439 aa27.28■■□□□ 1.96
CDC42BPB-205ENST00000559245 RIMS1Q86UR5 1692 aaKnown RBP27.27■■□□□ 1.96
CDC42BPB-205ENST00000559245 TTC37Q6PGP7 1564 aa27.26■■□□□ 1.96
CDC42BPB-205ENST00000559245 FANCAO15360 1455 aa27.26■■□□□ 1.95
CDC42BPB-205ENST00000559245 PCF11O94913 1555 aaKnown RBP27.22■■□□□ 1.95
CDC42BPB-205ENST00000559245 ZMYM4Q5VZL5 1548 aa27.2■■□□□ 1.94
CDC42BPB-205ENST00000559245 CDK13Q14004 1512 aaKnown RBP27.19■■□□□ 1.94
CDC42BPB-205ENST00000559245 SIGLEC1Q9BZZ2 1709 aa27.17■■□□□ 1.94
CDC42BPB-205ENST00000559245 FBXO41Q8TF61 875 aa27.17■■□□□ 1.94
CDC42BPB-205ENST00000559245 LMTK3Q96Q04 1460 aa27.17■■□□□ 1.94
CDC42BPB-205ENST00000559245 ZFYVE16Q7Z3T8 1539 aa27.16■■□□□ 1.94
CDC42BPB-205ENST00000559245 HECW1Q76N89 1606 aa27.12■■□□□ 1.93
CDC42BPB-205ENST00000559245 POGZQ7Z3K3 1410 aa27.12■■□□□ 1.93
CDC42BPB-205ENST00000559245 YEATS2Q9ULM3 1422 aa27.12■■□□□ 1.93
CDC42BPB-205ENST00000559245 MAGI2Q86UL8 1455 aa27.11■■□□□ 1.93
CDC42BPB-205ENST00000559245 MYO5CQ9NQX4 1742 aa27.1■■□□□ 1.93
CDC42BPB-205ENST00000559245 FER1L4A9Z1Z3 1794 aa27.09■■□□□ 1.93
CDC42BPB-205ENST00000559245 PLCH2O75038 1416 aa27.08■■□□□ 1.93
CDC42BPB-205ENST00000559245 SCAPERQ9BY12 1400 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms