RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 RAPGEF2Q9Y4G8 1499 aa31.54■■■□□ 2.64
CASC4-209ENST00000559222 PRXQ9BXM0 1461 aa31.49■■■□□ 2.63
CASC4-209ENST00000559222 KIAA0586Q9BVV6 1533 aa31.49■■■□□ 2.63
CASC4-209ENST00000559222 CYB5RLQ6IPT4 315 aa31.44■■■□□ 2.62
CASC4-209ENST00000559222 FAM9AQ8IZU1 332 aaPredicted RBP31.42■■■□□ 2.62
CASC4-209ENST00000559222 PRG4Q92954 1404 aaPredicted RBP31.41■■■□□ 2.62
CASC4-209ENST00000559222 JPH4Q96JJ6 628 aa31.4■■■□□ 2.62
CASC4-209ENST00000559222 EEA1Q15075 1411 aa31.4■■■□□ 2.62
CASC4-209ENST00000559222 IQGAP2Q13576 1575 aa31.39■■■□□ 2.62
CASC4-209ENST00000559222 CTTNBP2Q8WZ74 1663 aa31.38■■■□□ 2.61
CASC4-209ENST00000559222 CSRNP3Q8WYN3 585 aa31.38■■■□□ 2.61
CASC4-209ENST00000559222 KIF21BO75037 1637 aa31.23■■■□□ 2.59
CASC4-209ENST00000559222 UGGT2Q9NYU1 1516 aa31.2■■■□□ 2.59
CASC4-209ENST00000559222 DISP1Q96F81 1524 aa31.19■■■□□ 2.58
CASC4-209ENST00000559222 KIAA0556O60303 1618 aa31.13■■■□□ 2.57
CASC4-209ENST00000559222 EHMT2Q96KQ7 1210 aa31.08■■■□□ 2.57
CASC4-209ENST00000559222 CARMIL2Q6F5E8 1435 aa31.07■■■□□ 2.57
CASC4-209ENST00000559222 ADCY10Q96PN6 1610 aa31.05■■■□□ 2.56
CASC4-209ENST00000559222 TTBK1Q5TCY1 1321 aaPredicted RBP31.03■■■□□ 2.56
CASC4-209ENST00000559222 TNIKQ9UKE5 1360 aa31.02■■■□□ 2.56
CASC4-209ENST00000559222 PTPRGP23470 1445 aa30.99■■■□□ 2.55
CASC4-209ENST00000559222 GOLGA3Q08378 1498 aa30.99■■■□□ 2.55
CASC4-209ENST00000559222 SAMD9Q5K651 1589 aa30.95■■■□□ 2.54
CASC4-209ENST00000559222 RANGAP1P46060 587 aaPredicted RBP30.88■■■□□ 2.53
CASC4-209ENST00000559222 P3H3Q8IVL6 736 aa30.85■■■□□ 2.53
CASC4-209ENST00000559222 UBTFP17480 764 aaKnown RBP30.83■■■□□ 2.53
CASC4-209ENST00000559222 UACAQ9BZF9 1416 aa30.81■■■□□ 2.52
CASC4-209ENST00000559222 ABCC2Q92887 1545 aa30.81■■■□□ 2.52
CASC4-209ENST00000559222 PLB1Q6P1J6 1458 aa30.81■■■□□ 2.52
CASC4-209ENST00000559222 UHRF1BP1LA0JNW5 1464 aa30.79■■■□□ 2.52
CASC4-209ENST00000559222 ABCA8O94911 1581 aa30.77■■■□□ 2.52
CASC4-209ENST00000559222 FHOD3Q2V2M9 1422 aa30.76■■■□□ 2.51
CASC4-209ENST00000559222 TRHP20396 242 aaPredicted RBP30.75■■■□□ 2.51
CASC4-209ENST00000559222 EFCAB5A4FU69 1503 aa30.73■■■□□ 2.51
CASC4-209ENST00000559222 MAPKBP1O60336 1514 aa30.73■■■□□ 2.51
CASC4-209ENST00000559222 KIF13AQ9H1H9 1805 aa30.71■■■□□ 2.51
CASC4-209ENST00000559222 ZCCHC11Q5TAX3 1644 aaKnown RBP30.71■■■□□ 2.51
CASC4-209ENST00000559222 KDM5BQ9UGL1 1544 aa30.67■■■□□ 2.5
CASC4-209ENST00000559222 ARHGAP35Q9NRY4 1499 aa30.66■■■□□ 2.5
CASC4-209ENST00000559222 NPM1P06748 294 aaKnown RBP eCLIP30.65■■■□□ 2.5
CASC4-209ENST00000559222 RAPGEF6Q8TEU7 1601 aa30.62■■■□□ 2.49
CASC4-209ENST00000559222 DIP2BQ9P265 1576 aa30.62■■■□□ 2.49
CASC4-209ENST00000559222 ASXL2Q76L83 1435 aa30.57■■■□□ 2.48
CASC4-209ENST00000559222 ABCC10Q5T3U5 1492 aa30.57■■■□□ 2.48
CASC4-209ENST00000559222 ARID3CA6NKF2 412 aa30.53■■■□□ 2.48
CASC4-209ENST00000559222 NUP153P49790 1475 aaKnown RBP30.5■■■□□ 2.47
CASC4-209ENST00000559222 ATP10BO94823 1461 aa30.48■■■□□ 2.47
CASC4-209ENST00000559222 LOC105371045A0A1W2PR82 267 aa30.46■■■□□ 2.47
CASC4-209ENST00000559222 FAM69CQ0P6D2 419 aa30.45■■■□□ 2.47
CASC4-209ENST00000559222 CLIP1P30622 1438 aa30.43■■■□□ 2.46
CASC4-209ENST00000559222 WDR7Q9Y4E6 1490 aa30.42■■■□□ 2.46
CASC4-209ENST00000559222 TSPOAP1O95153 1857 aa30.42■■■□□ 2.46
CASC4-209ENST00000559222 EPRSP07814 1512 aaKnown RBP30.41■■■□□ 2.46
CASC4-209ENST00000559222 LRRIQ1Q96JM4 1722 aa30.39■■■□□ 2.45
CASC4-209ENST00000559222 FMN1Q68DA7 1419 aa30.38■■■□□ 2.45
CASC4-209ENST00000559222 GLI2P10070 1586 aa30.37■■■□□ 2.45
CASC4-209ENST00000559222 CDK13Q14004 1512 aaKnown RBP30.36■■■□□ 2.45
CASC4-209ENST00000559222 PCF11O94913 1555 aaKnown RBP30.36■■■□□ 2.45
CASC4-209ENST00000559222 PPRC1Q5VV67 1664 aaKnown RBP30.35■■■□□ 2.45
CASC4-209ENST00000559222 HECW1Q76N89 1606 aa30.34■■■□□ 2.45
CASC4-209ENST00000559222 CEP162Q5TB80 1403 aa30.34■■■□□ 2.45
CASC4-209ENST00000559222 MAP3K4Q9Y6R4 1608 aa30.33■■■□□ 2.45
CASC4-209ENST00000559222 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.24■■■□□ 2.43
CASC4-209ENST00000559222 HNRNPUL2Q1KMD3 747 aaKnown RBP30.24■■■□□ 2.43
CASC4-209ENST00000559222 KCNH8Q96L42 1107 aa30.24■■■□□ 2.43
CASC4-209ENST00000559222 ATP1B4Q9UN42 357 aaPredicted RBP30.23■■■□□ 2.43
CASC4-209ENST00000559222 CFAP43Q8NDM7 1665 aa30.21■■■□□ 2.43
CASC4-209ENST00000559222 CASKIN1Q8WXD9 1431 aa30.21■■■□□ 2.43
CASC4-209ENST00000559222 ABCA9Q8IUA7 1624 aa30.16■■■□□ 2.42
CASC4-209ENST00000559222 FYCO1Q9BQS8 1478 aa30.16■■■□□ 2.42
CASC4-209ENST00000559222 AEBP2Q6ZN18 517 aaPredicted RBP30.15■■■□□ 2.42
CASC4-209ENST00000559222 TTC37Q6PGP7 1564 aa30.09■■■□□ 2.41
CASC4-209ENST00000559222 CD109Q6YHK3 1445 aa30.09■■■□□ 2.41
CASC4-209ENST00000559222 MAGI3Q5TCQ9 1506 aa30.07■■■□□ 2.4
CASC4-209ENST00000559222 PLEKHD1A6NEE1 506 aa30.07■■■□□ 2.4
CASC4-209ENST00000559222 KDM6BO15054 1643 aa30.07■■■□□ 2.4
CASC4-209ENST00000559222 KIF14Q15058 1648 aa30.07■■■□□ 2.4
CASC4-209ENST00000559222 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.06■■■□□ 2.46e-7■■□□□ 12.8
CASC4-209ENST00000559222 CCDC18Q5T9S5 1454 aa30.06■■■□□ 2.4
CASC4-209ENST00000559222 TEX14Q8IWB6 1497 aa30.01■■■□□ 2.4
CASC4-209ENST00000559222 COL17A1Q9UMD9 1497 aaPredicted RBP29.99■■■□□ 2.39
CASC4-209ENST00000559222 TROQ12816 1431 aaPredicted RBP29.98■■■□□ 2.39
CASC4-209ENST00000559222 VPS8Q8N3P4 1428 aa29.95■■■□□ 2.38
CASC4-209ENST00000559222 MYO5CQ9NQX4 1742 aa29.89■■■□□ 2.38
CASC4-209ENST00000559222 CDK11AQ9UQ88 783 aaPredicted RBP29.89■■■□□ 2.38
CASC4-209ENST00000559222 TIAM1Q13009 1591 aa29.82■■■□□ 2.36
CASC4-209ENST00000559222 NEO1Q92859 1461 aa29.8■■■□□ 2.36
CASC4-209ENST00000559222 CDC42BPBQ9Y5S2 1711 aa29.8■■■□□ 2.36
CASC4-209ENST00000559222 FANCAO15360 1455 aa29.8■■■□□ 2.36
CASC4-209ENST00000559222 CDC42BPAQ5VT25 1732 aa29.79■■■□□ 2.36
CASC4-209ENST00000559222 PLCH2O75038 1416 aa29.79■■■□□ 2.36
CASC4-209ENST00000559222 CFAP74Q9C0B2 1584 aa29.78■■■□□ 2.36
CASC4-209ENST00000559222 ARAP3Q8WWN8 1544 aa29.78■■■□□ 2.36
CASC4-209ENST00000559222 PREX2Q70Z35 1606 aa29.78■■■□□ 2.36
CASC4-209ENST00000559222 FRMPD1Q5SYB0 1578 aa29.77■■■□□ 2.36
CASC4-209ENST00000559222 EHBP1L1Q8N3D4 1523 aa29.76■■■□□ 2.36
CASC4-209ENST00000559222 MTUS2Q5JR59 1369 aa29.74■■■□□ 2.35
CASC4-209ENST00000559222 AKNAQ7Z591 1439 aa29.72■■■□□ 2.35
CASC4-209ENST00000559222 ARHGAP5Q13017 1502 aa29.71■■■□□ 2.35
CASC4-209ENST00000559222 RICTORQ6R327 1708 aa29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms