RNA–Protein interactions for RNA: ENST00000559035.5

HMG20A-207, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-207ENST00000559035 ABCC10Q5T3U5 1492 aa13.86□□□□□ -0.19
HMG20A-207ENST00000559035 PRG4Q92954 1404 aaPredicted RBP13.83□□□□□ -0.2
HMG20A-207ENST00000559035 ADCY10Q96PN6 1610 aa13.82□□□□□ -0.2
HMG20A-207ENST00000559035 KDM6BO15054 1643 aa13.76□□□□□ -0.21
HMG20A-207ENST00000559035 JPH4Q96JJ6 628 aa13.73□□□□□ -0.21
HMG20A-207ENST00000559035 KDM4FA0A1W2PPD8 638 aa13.71□□□□□ -0.21
HMG20A-207ENST00000559035 FAM69CQ0P6D2 419 aa13.71□□□□□ -0.21
HMG20A-207ENST00000559035 KIAA0586Q9BVV6 1533 aa13.69□□□□□ -0.22
HMG20A-207ENST00000559035 PPRC1Q5VV67 1664 aaKnown RBP13.67□□□□□ -0.22
HMG20A-207ENST00000559035 CUL7Q14999 1698 aa13.66□□□□□ -0.22
HMG20A-207ENST00000559035 TSPOAP1O95153 1857 aa13.65□□□□□ -0.22
HMG20A-207ENST00000559035 GLI2P10070 1586 aa13.62□□□□□ -0.23
HMG20A-207ENST00000559035 ABCC2Q92887 1545 aa13.61□□□□□ -0.23
HMG20A-207ENST00000559035 NPM1P06748 294 aaKnown RBP eCLIP13.61□□□□□ -0.23
HMG20A-207ENST00000559035 IGF1RP08069 1367 aa13.58□□□□□ -0.23
HMG20A-207ENST00000559035 ADGRL1O94910 1474 aa13.58□□□□□ -0.24
HMG20A-207ENST00000559035 ILDR1Q86SU0 546 aaPredicted RBP13.57□□□□□ -0.24
HMG20A-207ENST00000559035 UHRF1BP1LA0JNW5 1464 aa13.56□□□□□ -0.24
HMG20A-207ENST00000559035 ASXL2Q76L83 1435 aa13.56□□□□□ -0.24
HMG20A-207ENST00000559035 PLB1Q6P1J6 1458 aa13.55□□□□□ -0.24
HMG20A-207ENST00000559035 MAP3K4Q9Y6R4 1608 aa13.55□□□□□ -0.24
HMG20A-207ENST00000559035 SUPT5HO00267 1087 aaKnown RBP13.55□□□□□ -0.24
HMG20A-207ENST00000559035 PTPRGP23470 1445 aa13.55□□□□□ -0.24
HMG20A-207ENST00000559035 COL17A1Q9UMD9 1497 aaPredicted RBP13.55□□□□□ -0.24
HMG20A-207ENST00000559035 KIF27Q86VH2 1401 aa13.54□□□□□ -0.24
HMG20A-207ENST00000559035 IQGAP2Q13576 1575 aa13.54□□□□□ -0.24
HMG20A-207ENST00000559035 TNIKQ9UKE5 1360 aa13.53□□□□□ -0.24
HMG20A-207ENST00000559035 HECW2Q9P2P5 1572 aa13.53□□□□□ -0.24
HMG20A-207ENST00000559035 EPRSP07814 1512 aaKnown RBP13.51□□□□□ -0.25
HMG20A-207ENST00000559035 DISP1Q96F81 1524 aa13.51□□□□□ -0.25
HMG20A-207ENST00000559035 KDM5BQ9UGL1 1544 aa13.51□□□□□ -0.25
HMG20A-207ENST00000559035 CARMIL2Q6F5E8 1435 aa13.49□□□□□ -0.25
HMG20A-207ENST00000559035 UACAQ9BZF9 1416 aa13.48□□□□□ -0.25
HMG20A-207ENST00000559035 ZCCHC11Q5TAX3 1644 aaKnown RBP13.47□□□□□ -0.25
HMG20A-207ENST00000559035 TEX14Q8IWB6 1497 aa13.46□□□□□ -0.25
HMG20A-207ENST00000559035 CARMIL1Q5VZK9 1371 aa13.45□□□□□ -0.26
HMG20A-207ENST00000559035 UGGT2Q9NYU1 1516 aa13.45□□□□□ -0.26
HMG20A-207ENST00000559035 KIAA0556O60303 1618 aa13.44□□□□□ -0.26
HMG20A-207ENST00000559035 WDR7Q9Y4E6 1490 aa13.4□□□□□ -0.26
HMG20A-207ENST00000559035 MAGI3Q5TCQ9 1506 aa13.38□□□□□ -0.27
HMG20A-207ENST00000559035 CFAP43Q8NDM7 1665 aa13.37□□□□□ -0.27
HMG20A-207ENST00000559035 TTBK1Q5TCY1 1321 aaPredicted RBP13.35□□□□□ -0.27
HMG20A-207ENST00000559035 ABCA8O94911 1581 aa13.34□□□□□ -0.27
HMG20A-207ENST00000559035 RAPGEF2Q9Y4G8 1499 aa13.34□□□□□ -0.27
HMG20A-207ENST00000559035 KIF21BO75037 1637 aa13.33□□□□□ -0.28
HMG20A-207ENST00000559035 CTTNBP2Q8WZ74 1663 aa13.31□□□□□ -0.28
HMG20A-207ENST00000559035 CD109Q6YHK3 1445 aa13.29□□□□□ -0.28
HMG20A-207ENST00000559035 ARAP3Q8WWN8 1544 aa13.28□□□□□ -0.28
HMG20A-207ENST00000559035 ADAMTSL3P82987 1691 aa13.27□□□□□ -0.29
HMG20A-207ENST00000559035 GOLGA3Q08378 1498 aa13.24□□□□□ -0.29
HMG20A-207ENST00000559035 ABCA9Q8IUA7 1624 aa13.23□□□□□ -0.29
HMG20A-207ENST00000559035 FRMPD1Q5SYB0 1578 aa13.23□□□□□ -0.29
HMG20A-207ENST00000559035 PTPRMP28827 1452 aa13.22□□□□□ -0.29
HMG20A-207ENST00000559035 FBXO41Q8TF61 875 aa13.21□□□□□ -0.29
HMG20A-207ENST00000559035 BCORL1Q5H9F3 1711 aa13.19□□□□□ -0.3
HMG20A-207ENST00000559035 PCF11O94913 1555 aaKnown RBP13.19□□□□□ -0.3
HMG20A-207ENST00000559035 LMTK3Q96Q04 1460 aa13.18□□□□□ -0.3
HMG20A-207ENST00000559035 PRXQ9BXM0 1461 aa13.18□□□□□ -0.3
HMG20A-207ENST00000559035 MADDQ8WXG6 1647 aa13.17□□□□□ -0.3
HMG20A-207ENST00000559035 ARHGEF40Q8TER5 1519 aa13.16□□□□□ -0.3
HMG20A-207ENST00000559035 ATP10BO94823 1461 aa13.16□□□□□ -0.3
HMG20A-207ENST00000559035 NEO1Q92859 1461 aa13.16□□□□□ -0.3
HMG20A-207ENST00000559035 PHLDB1Q86UU1 1377 aa13.15□□□□□ -0.3
HMG20A-207ENST00000559035 SAMD9Q5K651 1589 aa13.14□□□□□ -0.31
HMG20A-207ENST00000559035 KCNH8Q96L42 1107 aa13.12□□□□□ -0.31
HMG20A-207ENST00000559035 RICTORQ6R327 1708 aa13.1□□□□□ -0.31
HMG20A-207ENST00000559035 RAPGEF6Q8TEU7 1601 aa13.1□□□□□ -0.31
HMG20A-207ENST00000559035 RIMS1Q86UR5 1692 aaKnown RBP13.08□□□□□ -0.31
HMG20A-207ENST00000559035 SIGLEC1Q9BZZ2 1709 aa13.08□□□□□ -0.32
HMG20A-207ENST00000559035 ZMYM4Q5VZL5 1548 aa13.08□□□□□ -0.32
HMG20A-207ENST00000559035 NUP153P49790 1475 aaKnown RBP13.06□□□□□ -0.32
HMG20A-207ENST00000559035 RAPGEF3O95398 923 aa13.06□□□□□ -0.32
HMG20A-207ENST00000559035 FHOD3Q2V2M9 1422 aa13.05□□□□□ -0.32
HMG20A-207ENST00000559035 CFAP74Q9C0B2 1584 aa13.03□□□□□ -0.32
HMG20A-207ENST00000559035 TTC37Q6PGP7 1564 aa13.03□□□□□ -0.32
HMG20A-207ENST00000559035 ARID3CA6NKF2 412 aa13.01□□□□□ -0.33
HMG20A-207ENST00000559035 DENND4BO75064 1496 aaPredicted RBP13.01□□□□□ -0.33
HMG20A-207ENST00000559035 EFCAB5A4FU69 1503 aa13□□□□□ -0.33
HMG20A-207ENST00000559035 FANCAO15360 1455 aa13□□□□□ -0.33
HMG20A-207ENST00000559035 ZFYVE16Q7Z3T8 1539 aa12.99□□□□□ -0.33
HMG20A-207ENST00000559035 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.99□□□□□ -0.33
HMG20A-207ENST00000559035 MAGI2Q86UL8 1455 aa12.97□□□□□ -0.33
HMG20A-207ENST00000559035 AKNAQ7Z591 1439 aa12.97□□□□□ -0.33
HMG20A-207ENST00000559035 YEATS2Q9ULM3 1422 aa12.97□□□□□ -0.33
HMG20A-207ENST00000559035 FER1L4A9Z1Z3 1794 aa12.97□□□□□ -0.33
HMG20A-207ENST00000559035 ARHGEF12Q9NZN5 1544 aa12.97□□□□□ -0.33
HMG20A-207ENST00000559035 HECW1Q76N89 1606 aa12.95□□□□□ -0.34
HMG20A-207ENST00000559035 P3H3Q8IVL6 736 aa12.95□□□□□ -0.34
HMG20A-207ENST00000559035 POGZQ7Z3K3 1410 aa12.95□□□□□ -0.34
HMG20A-207ENST00000559035 ARID4BQ4LE39 1312 aaPredicted RBP12.94□□□□□ -0.34
HMG20A-207ENST00000559035 PREX1Q8TCU6 1659 aa12.94□□□□□ -0.34
HMG20A-207ENST00000559035 HSPA2P54652 639 aa12.94□□□□□ -0.34
HMG20A-207ENST00000559035 CERKQ8TCT0 537 aa12.91□□□□□ -0.34
HMG20A-207ENST00000559035 STRCQ7RTU9 1775 aa12.9□□□□□ -0.34
HMG20A-207ENST00000559035 CDK13Q14004 1512 aaKnown RBP12.88□□□□□ -0.35
HMG20A-207ENST00000559035 C9orf84Q5VXU9 1444 aa12.88□□□□□ -0.35
HMG20A-207ENST00000559035 KDM5CP41229 1560 aa12.87□□□□□ -0.35
HMG20A-207ENST00000559035 FAM9AQ8IZU1 332 aaPredicted RBP12.87□□□□□ -0.35
HMG20A-207ENST00000559035 PLCH2O75038 1416 aa12.87□□□□□ -0.35
HMG20A-207ENST00000559035 REREQ9P2R6 1566 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms