RNA–Protein interactions for RNA: ENST00000558726.5

TMC3-202, Transcript of transmembrane channel like 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TMC3, Length 4,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-202ENST00000558726 KANK4Q5T7N3 995 aaPredicted RBP14.69□□□□□ -0.06
TMC3-202ENST00000558726 CARMIL1Q5VZK9 1371 aa14.68□□□□□ -0.06
TMC3-202ENST00000558726 ARID3CA6NKF2 412 aa14.68□□□□□ -0.06
TMC3-202ENST00000558726 TMC1Q8TDI8 760 aa14.68□□□□□ -0.06
TMC3-202ENST00000558726 RAPGEF2Q9Y4G8 1499 aa14.67□□□□□ -0.06
TMC3-202ENST00000558726 RUSC2Q8N2Y8 1516 aa14.67□□□□□ -0.06
TMC3-202ENST00000558726 DHX57Q6P158 1386 aaKnown RBP14.67□□□□□ -0.06
TMC3-202ENST00000558726 ZNF777Q9ULD5 760 aaPredicted RBP14.66□□□□□ -0.06
TMC3-202ENST00000558726 RAB3GAP2Q9H2M9 1393 aa14.66□□□□□ -0.06
TMC3-202ENST00000558726 CUX2O14529 1486 aa14.65□□□□□ -0.06
TMC3-202ENST00000558726 ZBTB47Q9UFB7 747 aaPredicted RBP14.64□□□□□ -0.07
TMC3-202ENST00000558726 RRP7BPQ9NSQ0 103 aa14.63□□□□□ -0.07
TMC3-202ENST00000558726 PPP4R2Q9NY27 417 aa14.63□□□□□ -0.07
TMC3-202ENST00000558726 IRX6P78412 446 aaPredicted RBP14.62□□□□□ -0.07
TMC3-202ENST00000558726 ARHGAP35Q9NRY4 1499 aa14.61□□□□□ -0.07
TMC3-202ENST00000558726 ERICH6BQ5W0A0 696 aa14.61□□□□□ -0.07
TMC3-202ENST00000558726 SLC4A1APQ9BWU0 796 aaKnown RBP14.6□□□□□ -0.07
TMC3-202ENST00000558726 NPM2Q86SE8 214 aaKnown RBP14.6□□□□□ -0.07
TMC3-202ENST00000558726 FBLN2P98095 1184 aa14.59□□□□□ -0.07
TMC3-202ENST00000558726 ATAD2BQ9ULI0 1458 aa14.58□□□□□ -0.07
TMC3-202ENST00000558726 TSHZ2Q9NRE2 1034 aa14.57□□□□□ -0.08
TMC3-202ENST00000558726 KIF21BO75037 1637 aa14.56□□□□□ -0.08
TMC3-202ENST00000558726 CANXP27824 592 aaKnown RBP14.56□□□□□ -0.08
TMC3-202ENST00000558726 PPP1R15AO75807 674 aaPredicted RBP14.55□□□□□ -0.08
TMC3-202ENST00000558726 TSPY4P0CV99 314 aa14.55□□□□□ -0.08
TMC3-202ENST00000558726 TSPY10P0CW01 314 aa14.55□□□□□ -0.08
TMC3-202ENST00000558726 RBM19Q9Y4C8 960 aaKnown RBP14.54□□□□□ -0.08
TMC3-202ENST00000558726 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.54□□□□□ -0.08
TMC3-202ENST00000558726 FMN1Q68DA7 1419 aa14.52□□□□□ -0.09
TMC3-202ENST00000558726 NBR1Q14596 966 aa14.51□□□□□ -0.09
TMC3-202ENST00000558726 DDRGK1Q96HY6 314 aa14.46□□□□□ -0.09
TMC3-202ENST00000558726 HSPA5P11021 654 aaKnown RBP14.45□□□□□ -0.1
TMC3-202ENST00000558726 SALL2Q9Y467 1007 aaPredicted RBP14.44□□□□□ -0.1
TMC3-202ENST00000558726 WDR43Q15061 677 aaKnown RBP eCLIP14.44□□□□□ -0.1
TMC3-202ENST00000558726 KDM2AQ9Y2K7 1162 aa14.44□□□□□ -0.1
TMC3-202ENST00000558726 ERICH3Q5RHP9 1530 aa14.44□□□□□ -0.1
TMC3-202ENST00000558726 UPF2Q9HAU5 1272 aaKnown RBP14.43□□□□□ -0.1
TMC3-202ENST00000558726 CFDP1Q9UEE9 299 aaPredicted RBP14.43□□□□□ -0.1
TMC3-202ENST00000558726 NOP58Q9Y2X3 529 aaKnown RBP14.43□□□□□ -0.1
TMC3-202ENST00000558726 CARD11Q9BXL7 1154 aa14.4□□□□□ -0.1
TMC3-202ENST00000558726 RRBP1Q9P2E9 1410 aaKnown RBP14.4□□□□□ -0.1
TMC3-202ENST00000558726 PLEKHD1A6NEE1 506 aa14.39□□□□□ -0.11
TMC3-202ENST00000558726 PPM1GO15355 546 aaPredicted RBP14.39□□□□□ -0.11
TMC3-202ENST00000558726 B4GALNT3Q6L9W6 998 aa14.38□□□□□ -0.11
TMC3-202ENST00000558726 CADPSQ9ULU8 1353 aa14.38□□□□□ -0.11
TMC3-202ENST00000558726 NEFMP07197 916 aa14.38□□□□□ -0.11
TMC3-202ENST00000558726 CHMP7Q8WUX9 453 aaPredicted RBP14.37□□□□□ -0.11
TMC3-202ENST00000558726 SYNJ1O43426 1573 aa14.36□□□□□ -0.11
TMC3-202ENST00000558726 BCL11AQ9H165 835 aa14.35□□□□□ -0.11
TMC3-202ENST00000558726 FHOD3Q2V2M9 1422 aa14.35□□□□□ -0.11
TMC3-202ENST00000558726 MPHOSPH9Q99550 1183 aa14.34□□□□□ -0.11
TMC3-202ENST00000558726 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.34□□□□□ -0.11
TMC3-202ENST00000558726 CDCA8Q53HL2 280 aa14.34□□□□□ -0.11
TMC3-202ENST00000558726 KCNH8Q96L42 1107 aa14.32□□□□□ -0.12
TMC3-202ENST00000558726 EIF4G1Q04637 1599 aaKnown RBP14.31□□□□□ -0.12
TMC3-202ENST00000558726 PRXQ9BXM0 1461 aa14.31□□□□□ -0.12
TMC3-202ENST00000558726 IGF1RP08069 1367 aa14.3□□□□□ -0.12
TMC3-202ENST00000558726 CCDC18Q5T9S5 1454 aa14.3□□□□□ -0.12
TMC3-202ENST00000558726 LRRC9Q6ZRR7 1453 aa14.29□□□□□ -0.12
TMC3-202ENST00000558726 ARAP1Q96P48 1450 aa14.29□□□□□ -0.12
TMC3-202ENST00000558726 TOP2BQ02880 1626 aa14.28□□□□□ -0.12
TMC3-202ENST00000558726 BECN1Q14457 450 aa14.28□□□□□ -0.12
TMC3-202ENST00000558726 L3MBTL2Q969R5 705 aa14.27□□□□□ -0.13
TMC3-202ENST00000558726 FANCIQ9NVI1 1328 aa14.26□□□□□ -0.13
TMC3-202ENST00000558726 KNSTRNQ9Y448 316 aa14.26□□□□□ -0.13
TMC3-202ENST00000558726 NUDCQ9Y266 331 aa14.26□□□□□ -0.13
TMC3-202ENST00000558726 ROCK2O75116 1388 aaKnown RBP14.25□□□□□ -0.13
TMC3-202ENST00000558726 NCAPD3P42695 1498 aa14.25□□□□□ -0.13
TMC3-202ENST00000558726 DEKP35659 375 aaKnown RBP14.25□□□□□ -0.13
TMC3-202ENST00000558726 RALBP1Q15311 655 aa14.25□□□□□ -0.13
TMC3-202ENST00000558726 EIF5BO60841 1220 aaKnown RBP14.24□□□□□ -0.13
TMC3-202ENST00000558726 UACAQ9BZF9 1416 aa14.24□□□□□ -0.13
TMC3-202ENST00000558726 ANP32BQ92688 251 aaKnown RBP14.24□□□□□ -0.13
TMC3-202ENST00000558726 PHLDB1Q86UU1 1377 aa14.24□□□□□ -0.13
TMC3-202ENST00000558726 RGL3Q3MIN7 710 aa14.24□□□□□ -0.13
TMC3-202ENST00000558726 PDS5BQ9NTI5 1447 aa14.23□□□□□ -0.13
TMC3-202ENST00000558726 ZBED9Q6R2W3 1325 aa14.23□□□□□ -0.13
TMC3-202ENST00000558726 FGD6Q6ZV73 1430 aa14.23□□□□□ -0.13
TMC3-202ENST00000558726 TCERG1O14776 1098 aaKnown RBP14.23□□□□□ -0.13
TMC3-202ENST00000558726 SLC24A1O60721 1099 aa14.22□□□□□ -0.13
TMC3-202ENST00000558726 CUX1P39880 1505 aa14.22□□□□□ -0.13
TMC3-202ENST00000558726 PRKRIP1Q9H875 184 aaPredicted RBP14.21□□□□□ -0.13
TMC3-202ENST00000558726 HSP90AA1P07900 732 aaKnown RBP14.21□□□□□ -0.13
TMC3-202ENST00000558726 TDRD9Q8NDG6 1382 aaKnown RBP14.21□□□□□ -0.13
TMC3-202ENST00000558726 PKD2Q13563 968 aa14.21□□□□□ -0.13
TMC3-202ENST00000558726 TMF1P82094 1093 aa14.2□□□□□ -0.14
TMC3-202ENST00000558726 KTN1Q86UP2 1357 aaKnown RBP14.2□□□□□ -0.14
TMC3-202ENST00000558726 DCAF11Q8TEB1 546 aa14.2□□□□□ -0.14
TMC3-202ENST00000558726 FGD5Q6ZNL6 1462 aa14.2□□□□□ -0.14
TMC3-202ENST00000558726 ANKRD30AQ9BXX3 1397 aa14.19□□□□□ -0.14
TMC3-202ENST00000558726 FOXD1Q16676 465 aa14.19□□□□□ -0.14
TMC3-202ENST00000558726 CASKIN1Q8WXD9 1431 aa14.19□□□□□ -0.14
TMC3-202ENST00000558726 CHGAP10645 457 aaKnown RBP14.19□□□□□ -0.14
TMC3-202ENST00000558726 PDE3BQ13370 1112 aa14.19□□□□□ -0.14
TMC3-202ENST00000558726 IPO9Q96P70 1041 aaKnown RBP14.18□□□□□ -0.14
TMC3-202ENST00000558726 RCAN3Q9UKA8 241 aa14.18□□□□□ -0.14
TMC3-202ENST00000558726 FANCD2Q9BXW9 1451 aa14.17□□□□□ -0.14
TMC3-202ENST00000558726 MYOM3Q5VTT5 1437 aa14.17□□□□□ -0.14
TMC3-202ENST00000558726 GLIPR1L2Q4G1C9 344 aa14.17□□□□□ -0.14
TMC3-202ENST00000558726 FYCO1Q9BQS8 1478 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms