RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 FHAD1B1AJZ9 1412 aa26.88■■□□□ 1.89
LINC01220-201ENST00000558575 PRG4Q92954 1404 aaPredicted RBP26.88■■□□□ 1.89
LINC01220-201ENST00000558575 FAM69CQ0P6D2 419 aa26.86■■□□□ 1.89
LINC01220-201ENST00000558575 ADCY10Q96PN6 1610 aa26.83■■□□□ 1.89
LINC01220-201ENST00000558575 BIVM-ERCC5R4GMW8 1640 aa26.82■■□□□ 1.88
LINC01220-201ENST00000558575 WRNQ14191 1432 aaPredicted RBP eCLIP26.82■■□□□ 1.88
LINC01220-201ENST00000558575 ERICH3Q5RHP9 1530 aa26.8■■□□□ 1.88
LINC01220-201ENST00000558575 RUSC2Q8N2Y8 1516 aa26.79■■□□□ 1.88
LINC01220-201ENST00000558575 TOP2BQ02880 1626 aa26.76■■□□□ 1.87
LINC01220-201ENST00000558575 JPH4Q96JJ6 628 aa26.71■■□□□ 1.87
LINC01220-201ENST00000558575 NPM1P06748 294 aaKnown RBP eCLIP26.65■■□□□ 1.86
LINC01220-201ENST00000558575 PPRC1Q5VV67 1664 aaKnown RBP26.61■■□□□ 1.85
LINC01220-201ENST00000558575 ADGRL1O94910 1474 aa26.57■■□□□ 1.84
LINC01220-201ENST00000558575 HECW2Q9P2P5 1572 aa26.54■■□□□ 1.84
LINC01220-201ENST00000558575 KIAA0586Q9BVV6 1533 aa26.42■■□□□ 1.82
LINC01220-201ENST00000558575 GLI2P10070 1586 aa26.41■■□□□ 1.82
LINC01220-201ENST00000558575 CUL7Q14999 1698 aa26.41■■□□□ 1.82
LINC01220-201ENST00000558575 COL17A1Q9UMD9 1497 aaPredicted RBP26.36■■□□□ 1.81
LINC01220-201ENST00000558575 ABCC2Q92887 1545 aa26.34■■□□□ 1.81
LINC01220-201ENST00000558575 ASXL2Q76L83 1435 aa26.33■■□□□ 1.81
LINC01220-201ENST00000558575 MAP3K4Q9Y6R4 1608 aa26.32■■□□□ 1.8
LINC01220-201ENST00000558575 CHIC1Q5VXU3 224 aa26.3■■□□□ 1.8
LINC01220-201ENST00000558575 PTPRGP23470 1445 aa26.3■■□□□ 1.8
LINC01220-201ENST00000558575 PLB1Q6P1J6 1458 aa26.29■■□□□ 1.8
LINC01220-201ENST00000558575 TTBK1Q5TCY1 1321 aaPredicted RBP26.22■■□□□ 1.79
LINC01220-201ENST00000558575 KIF27Q86VH2 1401 aa26.22■■□□□ 1.79
LINC01220-201ENST00000558575 IGF1RP08069 1367 aa26.2■■□□□ 1.78
LINC01220-201ENST00000558575 EPRSP07814 1512 aaKnown RBP26.19■■□□□ 1.78
LINC01220-201ENST00000558575 UHRF1BP1LA0JNW5 1464 aa26.19■■□□□ 1.78
LINC01220-201ENST00000558575 TNIKQ9UKE5 1360 aa26.18■■□□□ 1.78
LINC01220-201ENST00000558575 ZCCHC11Q5TAX3 1644 aaKnown RBP26.16■■□□□ 1.78
LINC01220-201ENST00000558575 TEX14Q8IWB6 1497 aa26.14■■□□□ 1.78
LINC01220-201ENST00000558575 IQGAP2Q13576 1575 aa26.12■■□□□ 1.77
LINC01220-201ENST00000558575 CARMIL2Q6F5E8 1435 aa26.12■■□□□ 1.77
LINC01220-201ENST00000558575 KDM5BQ9UGL1 1544 aa26.1■■□□□ 1.77
LINC01220-201ENST00000558575 UACAQ9BZF9 1416 aa26.1■■□□□ 1.77
LINC01220-201ENST00000558575 FBXO41Q8TF61 875 aa26.07■■□□□ 1.76
LINC01220-201ENST00000558575 DISP1Q96F81 1524 aa26.06■■□□□ 1.76
LINC01220-201ENST00000558575 KIF21BO75037 1637 aa26.06■■□□□ 1.76
LINC01220-201ENST00000558575 CARMIL1Q5VZK9 1371 aa25.99■■□□□ 1.75
LINC01220-201ENST00000558575 CFAP43Q8NDM7 1665 aa25.98■■□□□ 1.75
LINC01220-201ENST00000558575 WDR7Q9Y4E6 1490 aa25.94■■□□□ 1.74
LINC01220-201ENST00000558575 KIAA0556O60303 1618 aa25.92■■□□□ 1.74
LINC01220-201ENST00000558575 UGGT2Q9NYU1 1516 aa25.9■■□□□ 1.74
LINC01220-201ENST00000558575 CSRNP3Q8WYN3 585 aa25.9■■□□□ 1.74
LINC01220-201ENST00000558575 MAGI3Q5TCQ9 1506 aa25.89■■□□□ 1.74
LINC01220-201ENST00000558575 FAM9AQ8IZU1 332 aaPredicted RBP25.88■■□□□ 1.73
LINC01220-201ENST00000558575 ADAMTSL3P82987 1691 aa25.87■■□□□ 1.73
LINC01220-201ENST00000558575 EEA1Q15075 1411 aa25.83■■□□□ 1.73
LINC01220-201ENST00000558575 CD109Q6YHK3 1445 aa25.83■■□□□ 1.73
LINC01220-201ENST00000558575 PRXQ9BXM0 1461 aa25.83■■□□□ 1.73
LINC01220-201ENST00000558575 RAPGEF2Q9Y4G8 1499 aa25.81■■□□□ 1.72
LINC01220-201ENST00000558575 PTPRMP28827 1452 aa25.79■■□□□ 1.72
LINC01220-201ENST00000558575 CTTNBP2Q8WZ74 1663 aa25.74■■□□□ 1.71
LINC01220-201ENST00000558575 ABCA8O94911 1581 aa25.73■■□□□ 1.71
LINC01220-201ENST00000558575 PCF11O94913 1555 aaKnown RBP25.73■■□□□ 1.71
LINC01220-201ENST00000558575 ARAP3Q8WWN8 1544 aa25.73■■□□□ 1.71
LINC01220-201ENST00000558575 BCORL1Q5H9F3 1711 aa25.72■■□□□ 1.71
LINC01220-201ENST00000558575 MADDQ8WXG6 1647 aa25.7■■□□□ 1.71
LINC01220-201ENST00000558575 LMTK3Q96Q04 1460 aa25.69■■□□□ 1.7
LINC01220-201ENST00000558575 KCNH8Q96L42 1107 aa25.69■■□□□ 1.7
LINC01220-201ENST00000558575 RIMS1Q86UR5 1692 aaKnown RBP25.61■■□□□ 1.69
LINC01220-201ENST00000558575 FRMPD1Q5SYB0 1578 aa25.6■■□□□ 1.69
LINC01220-201ENST00000558575 ABCA9Q8IUA7 1624 aa25.59■■□□□ 1.69
LINC01220-201ENST00000558575 EHMT2Q96KQ7 1210 aa25.53■■□□□ 1.68
LINC01220-201ENST00000558575 GOLGA3Q08378 1498 aa25.53■■□□□ 1.68
LINC01220-201ENST00000558575 RAPGEF3O95398 923 aa25.49■■□□□ 1.67
LINC01220-201ENST00000558575 ILDR2Q71H61 639 aa25.46■■□□□ 1.67
LINC01220-201ENST00000558575 ARHGEF40Q8TER5 1519 aa25.46■■□□□ 1.67
LINC01220-201ENST00000558575 SIGLEC1Q9BZZ2 1709 aa25.46■■□□□ 1.67
LINC01220-201ENST00000558575 ATP10BO94823 1461 aa25.45■■□□□ 1.66
LINC01220-201ENST00000558575 PHLDB1Q86UU1 1377 aa25.44■■□□□ 1.66
LINC01220-201ENST00000558575 RICTORQ6R327 1708 aa25.44■■□□□ 1.66
LINC01220-201ENST00000558575 HSPA2P54652 639 aa25.44■■□□□ 1.66
LINC01220-201ENST00000558575 NEO1Q92859 1461 aa25.44■■□□□ 1.66
LINC01220-201ENST00000558575 ARID3CA6NKF2 412 aa25.42■■□□□ 1.66
LINC01220-201ENST00000558575 UBTFP17480 764 aaKnown RBP25.42■■□□□ 1.66
LINC01220-201ENST00000558575 CERKQ8TCT0 537 aa25.41■■□□□ 1.66
LINC01220-201ENST00000558575 ARID4BQ4LE39 1312 aaPredicted RBP25.4■■□□□ 1.66
LINC01220-201ENST00000558575 SOCS7O14512 581 aa25.37■■□□□ 1.65
LINC01220-201ENST00000558575 DISP3Q9P2K9 1392 aa25.36■■□□□ 1.65
LINC01220-201ENST00000558575 FER1L4A9Z1Z3 1794 aa25.35■■□□□ 1.65
LINC01220-201ENST00000558575 RANGAP1P46060 587 aaPredicted RBP25.31■■□□□ 1.64
LINC01220-201ENST00000558575 RAPGEF6Q8TEU7 1601 aa25.3■■□□□ 1.64
LINC01220-201ENST00000558575 P3H3Q8IVL6 736 aa25.29■■□□□ 1.64
LINC01220-201ENST00000558575 PLPPR3Q6T4P5 718 aa25.28■■□□□ 1.64
LINC01220-201ENST00000558575 TTC37Q6PGP7 1564 aa25.27■■□□□ 1.64
LINC01220-201ENST00000558575 SPATA31D1Q6ZQQ2 1576 aa25.27■■□□□ 1.64
LINC01220-201ENST00000558575 LOC105371045A0A1W2PR82 267 aa25.27■■□□□ 1.64
LINC01220-201ENST00000558575 PREX1Q8TCU6 1659 aa25.26■■□□□ 1.63
LINC01220-201ENST00000558575 STRCQ7RTU9 1775 aa25.26■■□□□ 1.63
LINC01220-201ENST00000558575 ZMYM4Q5VZL5 1548 aa25.24■■□□□ 1.63
LINC01220-201ENST00000558575 FANCAO15360 1455 aa25.24■■□□□ 1.63
LINC01220-201ENST00000558575 SAMD9Q5K651 1589 aa25.23■■□□□ 1.63
LINC01220-201ENST00000558575 DENND4BO75064 1496 aaPredicted RBP25.23■■□□□ 1.63
LINC01220-201ENST00000558575 CFAP74Q9C0B2 1584 aa25.22■■□□□ 1.63
LINC01220-201ENST00000558575 FHOD3Q2V2M9 1422 aa25.21■■□□□ 1.63
LINC01220-201ENST00000558575 ZFYVE16Q7Z3T8 1539 aa25.2■■□□□ 1.62
LINC01220-201ENST00000558575 POGZQ7Z3K3 1410 aa25.19■■□□□ 1.62
LINC01220-201ENST00000558575 YEATS2Q9ULM3 1422 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms