RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 ADAMTS12P58397 1594 aa12.43□□□□□ -0.42
LRRC28-207ENST00000558500 KDM4FA0A1W2PPD8 638 aa12.43□□□□□ -0.42
LRRC28-207ENST00000558500 FHAD1B1AJZ9 1412 aa12.43□□□□□ -0.42
LRRC28-207ENST00000558500 ILDR1Q86SU0 546 aaPredicted RBP12.42□□□□□ -0.42
LRRC28-207ENST00000558500 WRNQ14191 1432 aaPredicted RBP eCLIP12.42□□□□□ -0.42
LRRC28-207ENST00000558500 PRG4Q92954 1404 aaPredicted RBP12.42□□□□□ -0.42
LRRC28-207ENST00000558500 ABCC10Q5T3U5 1492 aa12.41□□□□□ -0.42
LRRC28-207ENST00000558500 KIF13AQ9H1H9 1805 aa12.4□□□□□ -0.42
LRRC28-207ENST00000558500 JPH4Q96JJ6 628 aa12.39□□□□□ -0.43
LRRC28-207ENST00000558500 NPM1P06748 294 aaKnown RBP eCLIP12.38□□□□□ -0.43
LRRC28-207ENST00000558500 MAPKBP1O60336 1514 aa12.36□□□□□ -0.43
LRRC28-207ENST00000558500 ERICH3Q5RHP9 1530 aa12.34□□□□□ -0.43
LRRC28-207ENST00000558500 DIP2BQ9P265 1576 aa12.33□□□□□ -0.44
LRRC28-207ENST00000558500 KDM6BO15054 1643 aa12.31□□□□□ -0.44
LRRC28-207ENST00000558500 TOP2BQ02880 1626 aa12.29□□□□□ -0.44
LRRC28-207ENST00000558500 ADCY10Q96PN6 1610 aa12.27□□□□□ -0.44
LRRC28-207ENST00000558500 RUSC2Q8N2Y8 1516 aa12.26□□□□□ -0.45
LRRC28-207ENST00000558500 BIVM-ERCC5R4GMW8 1640 aa12.26□□□□□ -0.45
LRRC28-207ENST00000558500 KIAA0586Q9BVV6 1533 aa12.21□□□□□ -0.45
LRRC28-207ENST00000558500 ADGRL1O94910 1474 aa12.21□□□□□ -0.46
LRRC28-207ENST00000558500 PTPRGP23470 1445 aa12.19□□□□□ -0.46
LRRC28-207ENST00000558500 SUPT5HO00267 1087 aaKnown RBP12.17□□□□□ -0.46
LRRC28-207ENST00000558500 TSPOAP1O95153 1857 aa12.16□□□□□ -0.46
LRRC28-207ENST00000558500 PLB1Q6P1J6 1458 aa12.15□□□□□ -0.46
LRRC28-207ENST00000558500 ASXL2Q76L83 1435 aa12.15□□□□□ -0.46
LRRC28-207ENST00000558500 ABCC2Q92887 1545 aa12.15□□□□□ -0.46
LRRC28-207ENST00000558500 IGF1RP08069 1367 aa12.15□□□□□ -0.46
LRRC28-207ENST00000558500 COL17A1Q9UMD9 1497 aaPredicted RBP12.14□□□□□ -0.47
LRRC28-207ENST00000558500 GLI2P10070 1586 aa12.13□□□□□ -0.47
LRRC28-207ENST00000558500 HECW2Q9P2P5 1572 aa12.13□□□□□ -0.47
LRRC28-207ENST00000558500 TTBK1Q5TCY1 1321 aaPredicted RBP12.13□□□□□ -0.47
LRRC28-207ENST00000558500 TNIKQ9UKE5 1360 aa12.13□□□□□ -0.47
LRRC28-207ENST00000558500 CARMIL2Q6F5E8 1435 aa12.11□□□□□ -0.47
LRRC28-207ENST00000558500 PPRC1Q5VV67 1664 aaKnown RBP12.1□□□□□ -0.47
LRRC28-207ENST00000558500 UHRF1BP1LA0JNW5 1464 aa12.09□□□□□ -0.47
LRRC28-207ENST00000558500 KIF27Q86VH2 1401 aa12.08□□□□□ -0.48
LRRC28-207ENST00000558500 EPRSP07814 1512 aaKnown RBP12.07□□□□□ -0.48
LRRC28-207ENST00000558500 UACAQ9BZF9 1416 aa12.07□□□□□ -0.48
LRRC28-207ENST00000558500 TEX14Q8IWB6 1497 aa12.06□□□□□ -0.48
LRRC28-207ENST00000558500 FBXO41Q8TF61 875 aa12.05□□□□□ -0.48
LRRC28-207ENST00000558500 CUL7Q14999 1698 aa12.05□□□□□ -0.48
LRRC28-207ENST00000558500 CARMIL1Q5VZK9 1371 aa12.05□□□□□ -0.48
LRRC28-207ENST00000558500 KDM5BQ9UGL1 1544 aa12.03□□□□□ -0.48
LRRC28-207ENST00000558500 MAP3K4Q9Y6R4 1608 aa12.01□□□□□ -0.49
LRRC28-207ENST00000558500 DISP1Q96F81 1524 aa12.01□□□□□ -0.49
LRRC28-207ENST00000558500 IQGAP2Q13576 1575 aa12□□□□□ -0.49
LRRC28-207ENST00000558500 WDR7Q9Y4E6 1490 aa11.96□□□□□ -0.49
LRRC28-207ENST00000558500 MAGI3Q5TCQ9 1506 aa11.95□□□□□ -0.5
LRRC28-207ENST00000558500 CD109Q6YHK3 1445 aa11.94□□□□□ -0.5
LRRC28-207ENST00000558500 ZCCHC11Q5TAX3 1644 aaKnown RBP11.94□□□□□ -0.5
LRRC28-207ENST00000558500 UGGT2Q9NYU1 1516 aa11.93□□□□□ -0.5
LRRC28-207ENST00000558500 SCAF1Q9H7N4 1312 aaKnown RBP11.91□□□□□ -0.5
LRRC28-207ENST00000558500 KCNH8Q96L42 1107 aa11.91□□□□□ -0.5
LRRC28-207ENST00000558500 KIAA0556O60303 1618 aa11.89□□□□□ -0.51
LRRC28-207ENST00000558500 PPP4R3CPQ6ZMV5 832 aa11.89□□□□□ -0.51
LRRC28-207ENST00000558500 PTPRMP28827 1452 aa11.88□□□□□ -0.51
LRRC28-207ENST00000558500 RAPGEF2Q9Y4G8 1499 aa11.88□□□□□ -0.51
LRRC28-207ENST00000558500 ARAP3Q8WWN8 1544 aa11.86□□□□□ -0.51
LRRC28-207ENST00000558500 KIF21BO75037 1637 aa11.86□□□□□ -0.51
LRRC28-207ENST00000558500 CFAP43Q8NDM7 1665 aa11.85□□□□□ -0.51
LRRC28-207ENST00000558500 ABCA8O94911 1581 aa11.82□□□□□ -0.52
LRRC28-207ENST00000558500 LMTK3Q96Q04 1460 aa11.82□□□□□ -0.52
LRRC28-207ENST00000558500 PHLDB1Q86UU1 1377 aa11.81□□□□□ -0.52
LRRC28-207ENST00000558500 PCF11O94913 1555 aaKnown RBP11.81□□□□□ -0.52
LRRC28-207ENST00000558500 GOLGA3Q08378 1498 aa11.81□□□□□ -0.52
LRRC28-207ENST00000558500 ADAMTSL3P82987 1691 aa11.81□□□□□ -0.52
LRRC28-207ENST00000558500 RAPGEF3O95398 923 aa11.8□□□□□ -0.52
LRRC28-207ENST00000558500 ARID4BQ4LE39 1312 aaPredicted RBP11.78□□□□□ -0.52
LRRC28-207ENST00000558500 MAPK8IP2Q13387 824 aaPredicted RBP11.77□□□□□ -0.53
LRRC28-207ENST00000558500 ARID3CA6NKF2 412 aa11.76□□□□□ -0.53
LRRC28-207ENST00000558500 HSPA2P54652 639 aa11.75□□□□□ -0.53
LRRC28-207ENST00000558500 CERKQ8TCT0 537 aa11.75□□□□□ -0.53
LRRC28-207ENST00000558500 ATP10BO94823 1461 aa11.75□□□□□ -0.53
LRRC28-207ENST00000558500 NEO1Q92859 1461 aa11.75□□□□□ -0.53
LRRC28-207ENST00000558500 MADDQ8WXG6 1647 aa11.74□□□□□ -0.53
LRRC28-207ENST00000558500 BCORL1Q5H9F3 1711 aa11.73□□□□□ -0.53
LRRC28-207ENST00000558500 FAM9AQ8IZU1 332 aaPredicted RBP11.73□□□□□ -0.53
LRRC28-207ENST00000558500 ABCA9Q8IUA7 1624 aa11.72□□□□□ -0.53
LRRC28-207ENST00000558500 SOCS7O14512 581 aa11.71□□□□□ -0.53
LRRC28-207ENST00000558500 ILDR2Q71H61 639 aa11.71□□□□□ -0.53
LRRC28-207ENST00000558500 FRMPD1Q5SYB0 1578 aa11.7□□□□□ -0.54
LRRC28-207ENST00000558500 DISP3Q9P2K9 1392 aa11.69□□□□□ -0.54
LRRC28-207ENST00000558500 POTEDQ86YR6 584 aa11.69□□□□□ -0.54
LRRC28-207ENST00000558500 P3H3Q8IVL6 736 aa11.69□□□□□ -0.54
LRRC28-207ENST00000558500 DMRT2Q9Y5R5 561 aa11.68□□□□□ -0.54
LRRC28-207ENST00000558500 CTTNBP2Q8WZ74 1663 aa11.68□□□□□ -0.54
LRRC28-207ENST00000558500 ARHGEF40Q8TER5 1519 aa11.67□□□□□ -0.54
LRRC28-207ENST00000558500 PRXQ9BXM0 1461 aa11.67□□□□□ -0.54
LRRC28-207ENST00000558500 DENND4BO75064 1496 aaPredicted RBP11.66□□□□□ -0.54
LRRC28-207ENST00000558500 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.66□□□□□ -0.54
LRRC28-207ENST00000558500 HNRNPUL2Q1KMD3 747 aaKnown RBP11.66□□□□□ -0.54
LRRC28-207ENST00000558500 FHOD3Q2V2M9 1422 aa11.66□□□□□ -0.54
LRRC28-207ENST00000558500 POGZQ7Z3K3 1410 aa11.66□□□□□ -0.54
LRRC28-207ENST00000558500 RIMS1Q86UR5 1692 aaKnown RBP11.65□□□□□ -0.54
LRRC28-207ENST00000558500 AKNAQ7Z591 1439 aa11.65□□□□□ -0.54
LRRC28-207ENST00000558500 FANCAO15360 1455 aa11.64□□□□□ -0.55
LRRC28-207ENST00000558500 YEATS2Q9ULM3 1422 aa11.61□□□□□ -0.55
LRRC28-207ENST00000558500 KCNA4P22459 653 aa11.61□□□□□ -0.55
LRRC28-207ENST00000558500 MLECQ14165 292 aa11.61□□□□□ -0.55
LRRC28-207ENST00000558500 CNKSR2Q8WXI2 1034 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms