RNA–Protein interactions for RNA: ENST00000558306.1

NTRK3-210, Transcript of neurotrophic receptor tyrosine kinase 3, humanhuman

TSL 5

Gene NTRK3, Length 629 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK3-210ENST00000558306 PRG4Q92954 1404 aaPredicted RBP17.68■□□□□ 0.42
NTRK3-210ENST00000558306 RUSC2Q8N2Y8 1516 aa17.67■□□□□ 0.42
NTRK3-210ENST00000558306 CARMIL1Q5VZK9 1371 aa17.67■□□□□ 0.42
NTRK3-210ENST00000558306 KIAA0586Q9BVV6 1533 aa17.63■□□□□ 0.41
NTRK3-210ENST00000558306 RAPGEF2Q9Y4G8 1499 aa17.54■□□□□ 0.4
NTRK3-210ENST00000558306 NPM1P06748 294 aaKnown RBP eCLIP17.53■□□□□ 0.4
NTRK3-210ENST00000558306 IQGAP2Q13576 1575 aa17.51■□□□□ 0.39
NTRK3-210ENST00000558306 CARMIL2Q6F5E8 1435 aa17.5■□□□□ 0.39
NTRK3-210ENST00000558306 TTBK1Q5TCY1 1321 aaPredicted RBP17.47■□□□□ 0.39
NTRK3-210ENST00000558306 PTPRGP23470 1445 aa17.46■□□□□ 0.39
NTRK3-210ENST00000558306 TNIKQ9UKE5 1360 aa17.43■□□□□ 0.38
NTRK3-210ENST00000558306 ADCY10Q96PN6 1610 aa17.42■□□□□ 0.38
NTRK3-210ENST00000558306 CTTNBP2Q8WZ74 1663 aa17.42■□□□□ 0.38
NTRK3-210ENST00000558306 UGGT2Q9NYU1 1516 aa17.38■□□□□ 0.37
NTRK3-210ENST00000558306 KIF13AQ9H1H9 1805 aa17.37■□□□□ 0.37
NTRK3-210ENST00000558306 PRXQ9BXM0 1461 aa17.37■□□□□ 0.37
NTRK3-210ENST00000558306 CSRNP3Q8WYN3 585 aa17.37■□□□□ 0.37
NTRK3-210ENST00000558306 DISP1Q96F81 1524 aa17.37■□□□□ 0.37
NTRK3-210ENST00000558306 MAPKBP1O60336 1514 aa17.36■□□□□ 0.37
NTRK3-210ENST00000558306 FAM69CQ0P6D2 419 aa17.34■□□□□ 0.37
NTRK3-210ENST00000558306 KIAA0556O60303 1618 aa17.33■□□□□ 0.37
NTRK3-210ENST00000558306 EEA1Q15075 1411 aa17.32■□□□□ 0.36
NTRK3-210ENST00000558306 GOLGA3Q08378 1498 aa17.31■□□□□ 0.36
NTRK3-210ENST00000558306 ABCC10Q5T3U5 1492 aa17.31■□□□□ 0.36
NTRK3-210ENST00000558306 UACAQ9BZF9 1416 aa17.3■□□□□ 0.36
NTRK3-210ENST00000558306 FAM9AQ8IZU1 332 aaPredicted RBP17.3■□□□□ 0.36
NTRK3-210ENST00000558306 ABCC2Q92887 1545 aa17.3■□□□□ 0.36
NTRK3-210ENST00000558306 UHRF1BP1LA0JNW5 1464 aa17.29■□□□□ 0.36
NTRK3-210ENST00000558306 DIP2BQ9P265 1576 aa17.27■□□□□ 0.35
NTRK3-210ENST00000558306 TSPOAP1O95153 1857 aa17.24■□□□□ 0.35
NTRK3-210ENST00000558306 CHIC1Q5VXU3 224 aa17.23■□□□□ 0.35
NTRK3-210ENST00000558306 PLB1Q6P1J6 1458 aa17.23■□□□□ 0.35
NTRK3-210ENST00000558306 ASXL2Q76L83 1435 aa17.22■□□□□ 0.35
NTRK3-210ENST00000558306 P3H3Q8IVL6 736 aa17.2■□□□□ 0.34
NTRK3-210ENST00000558306 ZCCHC11Q5TAX3 1644 aaKnown RBP17.2■□□□□ 0.34
NTRK3-210ENST00000558306 KDM5BQ9UGL1 1544 aa17.2■□□□□ 0.34
NTRK3-210ENST00000558306 RANGAP1P46060 587 aaPredicted RBP17.17■□□□□ 0.34
NTRK3-210ENST00000558306 AEBP2Q6ZN18 517 aaPredicted RBP17.17■□□□□ 0.34
NTRK3-210ENST00000558306 KIF21BO75037 1637 aa17.15■□□□□ 0.34
NTRK3-210ENST00000558306 ABCA8O94911 1581 aa17.15■□□□□ 0.34
NTRK3-210ENST00000558306 GLI2P10070 1586 aa17.14■□□□□ 0.33
NTRK3-210ENST00000558306 SAMD9Q5K651 1589 aa17.12■□□□□ 0.33
NTRK3-210ENST00000558306 KDM6BO15054 1643 aa17.11■□□□□ 0.33
NTRK3-210ENST00000558306 UBTFP17480 764 aaKnown RBP17.11■□□□□ 0.33
NTRK3-210ENST00000558306 EHMT2Q96KQ7 1210 aa17.11■□□□□ 0.33
NTRK3-210ENST00000558306 EPRSP07814 1512 aaKnown RBP17.11■□□□□ 0.33
NTRK3-210ENST00000558306 WDR7Q9Y4E6 1490 aa17.09■□□□□ 0.33
NTRK3-210ENST00000558306 ARID3CA6NKF2 412 aa17.08■□□□□ 0.32
NTRK3-210ENST00000558306 KCNH8Q96L42 1107 aa17.08■□□□□ 0.32
NTRK3-210ENST00000558306 MAP3K4Q9Y6R4 1608 aa17.06■□□□□ 0.32
NTRK3-210ENST00000558306 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.05■□□□□ 0.32
NTRK3-210ENST00000558306 HNRNPUL2Q1KMD3 747 aaKnown RBP17.05■□□□□ 0.32
NTRK3-210ENST00000558306 RAPGEF6Q8TEU7 1601 aa17.05■□□□□ 0.32
NTRK3-210ENST00000558306 PPRC1Q5VV67 1664 aaKnown RBP17.04■□□□□ 0.32
NTRK3-210ENST00000558306 TEX14Q8IWB6 1497 aa17.04■□□□□ 0.32
NTRK3-210ENST00000558306 EFCAB5A4FU69 1503 aa17.03■□□□□ 0.32
NTRK3-210ENST00000558306 FHOD3Q2V2M9 1422 aa17.03■□□□□ 0.32
NTRK3-210ENST00000558306 ATP10BO94823 1461 aa17.01■□□□□ 0.31
NTRK3-210ENST00000558306 CFAP43Q8NDM7 1665 aa17.01■□□□□ 0.31
NTRK3-210ENST00000558306 CD109Q6YHK3 1445 aa16.98■□□□□ 0.31
NTRK3-210ENST00000558306 NUP153P49790 1475 aaKnown RBP16.94■□□□□ 0.3
NTRK3-210ENST00000558306 MAGI3Q5TCQ9 1506 aa16.93■□□□□ 0.3
NTRK3-210ENST00000558306 PLEKHD1A6NEE1 506 aa16.92■□□□□ 0.3
NTRK3-210ENST00000558306 ATP1B4Q9UN42 357 aaPredicted RBP16.92■□□□□ 0.3
NTRK3-210ENST00000558306 FMN1Q68DA7 1419 aa16.89■□□□□ 0.29
NTRK3-210ENST00000558306 COL17A1Q9UMD9 1497 aaPredicted RBP16.89■□□□□ 0.29
NTRK3-210ENST00000558306 ABCA9Q8IUA7 1624 aa16.88■□□□□ 0.29
NTRK3-210ENST00000558306 ARHGAP35Q9NRY4 1499 aa16.88■□□□□ 0.29
NTRK3-210ENST00000558306 HECW1Q76N89 1606 aa16.85■□□□□ 0.29
NTRK3-210ENST00000558306 PHLDB1Q86UU1 1377 aa16.82■□□□□ 0.28
NTRK3-210ENST00000558306 CDK11AQ9UQ88 783 aaPredicted RBP16.82■□□□□ 0.28
NTRK3-210ENST00000558306 CDK13Q14004 1512 aaKnown RBP16.81■□□□□ 0.28
NTRK3-210ENST00000558306 ARAP3Q8WWN8 1544 aa16.8■□□□□ 0.28
NTRK3-210ENST00000558306 KDM4FA0A1W2PPD8 638 aa16.79■□□□□ 0.28
NTRK3-210ENST00000558306 NEO1Q92859 1461 aa16.78■□□□□ 0.28
NTRK3-210ENST00000558306 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.75■□□□□ 0.27
NTRK3-210ENST00000558306 CFAP74Q9C0B2 1584 aa16.74■□□□□ 0.27
NTRK3-210ENST00000558306 ADGRL1O94910 1474 aa16.73■□□□□ 0.27
NTRK3-210ENST00000558306 CLIP1P30622 1438 aa16.73■□□□□ 0.27
NTRK3-210ENST00000558306 RAPGEF3O95398 923 aa16.73■□□□□ 0.27
NTRK3-210ENST00000558306 FANCAO15360 1455 aa16.73■□□□□ 0.27
NTRK3-210ENST00000558306 TTC37Q6PGP7 1564 aa16.72■□□□□ 0.27
NTRK3-210ENST00000558306 LRRIQ1Q96JM4 1722 aa16.71■□□□□ 0.27
NTRK3-210ENST00000558306 AKNAQ7Z591 1439 aa16.7■□□□□ 0.26
NTRK3-210ENST00000558306 CASKIN1Q8WXD9 1431 aa16.7■□□□□ 0.26
NTRK3-210ENST00000558306 PCF11O94913 1555 aaKnown RBP16.7■□□□□ 0.26
NTRK3-210ENST00000558306 CCDC18Q5T9S5 1454 aa16.69■□□□□ 0.26
NTRK3-210ENST00000558306 MYO5CQ9NQX4 1742 aa16.69■□□□□ 0.26
NTRK3-210ENST00000558306 KIF14Q15058 1648 aa16.69■□□□□ 0.26
NTRK3-210ENST00000558306 TROQ12816 1431 aaPredicted RBP16.68■□□□□ 0.26
NTRK3-210ENST00000558306 DENND4BO75064 1496 aaPredicted RBP16.67■□□□□ 0.26
NTRK3-210ENST00000558306 PLCH2O75038 1416 aa16.67■□□□□ 0.26
NTRK3-210ENST00000558306 FYCO1Q9BQS8 1478 aa16.66■□□□□ 0.26
NTRK3-210ENST00000558306 EFCAB2Q5VUJ9 269 aa16.65■□□□□ 0.26
NTRK3-210ENST00000558306 RICTORQ6R327 1708 aa16.65■□□□□ 0.26
NTRK3-210ENST00000558306 FRMPD1Q5SYB0 1578 aa16.64■□□□□ 0.25
NTRK3-210ENST00000558306 ARID4BQ4LE39 1312 aaPredicted RBP16.62■□□□□ 0.25
NTRK3-210ENST00000558306 ARHGAP5Q13017 1502 aa16.61■□□□□ 0.25
NTRK3-210ENST00000558306 SCAPERQ9BY12 1400 aa16.61■□□□□ 0.25
NTRK3-210ENST00000558306 CEP162Q5TB80 1403 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms