RNA–Protein interactions for RNA: ENST00000558294.1

SHF-203, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS ALT2 TSL 2

Gene SHF, Length 604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-203ENST00000558294 AEBP2Q6ZN18 517 aaPredicted RBP18.94■□□□□ 0.62
SHF-203ENST00000558294 IGF1RP08069 1367 aa18.87■□□□□ 0.61
SHF-203ENST00000558294 CUL7Q14999 1698 aa18.86■□□□□ 0.61
SHF-203ENST00000558294 KIAA0586Q9BVV6 1533 aa18.85■□□□□ 0.61
SHF-203ENST00000558294 KIF27Q86VH2 1401 aa18.85■□□□□ 0.61
SHF-203ENST00000558294 MAPKBP1O60336 1514 aa18.84■□□□□ 0.61
SHF-203ENST00000558294 ADCY10Q96PN6 1610 aa18.84■□□□□ 0.61
SHF-203ENST00000558294 ABCC10Q5T3U5 1492 aa18.84■□□□□ 0.61
SHF-203ENST00000558294 NPM1P06748 294 aaKnown RBP eCLIP18.8■□□□□ 0.6
SHF-203ENST00000558294 DIP2BQ9P265 1576 aa18.8■□□□□ 0.6
SHF-203ENST00000558294 FAM69CQ0P6D2 419 aa18.79■□□□□ 0.6
SHF-203ENST00000558294 CARMIL1Q5VZK9 1371 aa18.73■□□□□ 0.59
SHF-203ENST00000558294 PTPRGP23470 1445 aa18.69■□□□□ 0.58
SHF-203ENST00000558294 IQGAP2Q13576 1575 aa18.66■□□□□ 0.58
SHF-203ENST00000558294 CARMIL2Q6F5E8 1435 aa18.66■□□□□ 0.58
SHF-203ENST00000558294 KDM6BO15054 1643 aa18.65■□□□□ 0.58
SHF-203ENST00000558294 TNIKQ9UKE5 1360 aa18.65■□□□□ 0.58
SHF-203ENST00000558294 TSPOAP1O95153 1857 aa18.64■□□□□ 0.57
SHF-203ENST00000558294 ABCC2Q92887 1545 aa18.64■□□□□ 0.57
SHF-203ENST00000558294 TTBK1Q5TCY1 1321 aaPredicted RBP18.62■□□□□ 0.57
SHF-203ENST00000558294 DISP1Q96F81 1524 aa18.59■□□□□ 0.57
SHF-203ENST00000558294 UHRF1BP1LA0JNW5 1464 aa18.59■□□□□ 0.57
SHF-203ENST00000558294 ASXL2Q76L83 1435 aa18.57■□□□□ 0.56
SHF-203ENST00000558294 GLI2P10070 1586 aa18.56■□□□□ 0.56
SHF-203ENST00000558294 PLB1Q6P1J6 1458 aa18.56■□□□□ 0.56
SHF-203ENST00000558294 UACAQ9BZF9 1416 aa18.56■□□□□ 0.56
SHF-203ENST00000558294 UGGT2Q9NYU1 1516 aa18.55■□□□□ 0.56
SHF-203ENST00000558294 PPRC1Q5VV67 1664 aaKnown RBP18.55■□□□□ 0.56
SHF-203ENST00000558294 RAPGEF2Q9Y4G8 1499 aa18.55■□□□□ 0.56
SHF-203ENST00000558294 KDM4FA0A1W2PPD8 638 aa18.52■□□□□ 0.56
SHF-203ENST00000558294 KDM5BQ9UGL1 1544 aa18.51■□□□□ 0.55
SHF-203ENST00000558294 KIAA0556O60303 1618 aa18.51■□□□□ 0.55
SHF-203ENST00000558294 ZCCHC11Q5TAX3 1644 aaKnown RBP18.48■□□□□ 0.55
SHF-203ENST00000558294 EPRSP07814 1512 aaKnown RBP18.47■□□□□ 0.55
SHF-203ENST00000558294 MAP3K4Q9Y6R4 1608 aa18.46■□□□□ 0.55
SHF-203ENST00000558294 CTTNBP2Q8WZ74 1663 aa18.44■□□□□ 0.54
SHF-203ENST00000558294 COL17A1Q9UMD9 1497 aaPredicted RBP18.41■□□□□ 0.54
SHF-203ENST00000558294 TEX14Q8IWB6 1497 aa18.39■□□□□ 0.53
SHF-203ENST00000558294 WDR7Q9Y4E6 1490 aa18.38■□□□□ 0.53
SHF-203ENST00000558294 GOLGA3Q08378 1498 aa18.36■□□□□ 0.53
SHF-203ENST00000558294 ADGRL1O94910 1474 aa18.35■□□□□ 0.53
SHF-203ENST00000558294 PRXQ9BXM0 1461 aa18.35■□□□□ 0.53
SHF-203ENST00000558294 ABCA8O94911 1581 aa18.34■□□□□ 0.53
SHF-203ENST00000558294 CFAP43Q8NDM7 1665 aa18.29■□□□□ 0.52
SHF-203ENST00000558294 MAGI3Q5TCQ9 1506 aa18.28■□□□□ 0.52
SHF-203ENST00000558294 CD109Q6YHK3 1445 aa18.27■□□□□ 0.52
SHF-203ENST00000558294 KCNH8Q96L42 1107 aa18.24■□□□□ 0.51
SHF-203ENST00000558294 SAMD9Q5K651 1589 aa18.18■□□□□ 0.5
SHF-203ENST00000558294 ATP10BO94823 1461 aa18.18■□□□□ 0.5
SHF-203ENST00000558294 P3H3Q8IVL6 736 aa18.17■□□□□ 0.5
SHF-203ENST00000558294 HECW2Q9P2P5 1572 aa18.15■□□□□ 0.5
SHF-203ENST00000558294 ARAP3Q8WWN8 1544 aa18.14■□□□□ 0.49
SHF-203ENST00000558294 ARID3CA6NKF2 412 aa18.14■□□□□ 0.49
SHF-203ENST00000558294 FAM9AQ8IZU1 332 aaPredicted RBP18.14■□□□□ 0.49
SHF-203ENST00000558294 CSRNP3Q8WYN3 585 aa18.13■□□□□ 0.49
SHF-203ENST00000558294 ABCA9Q8IUA7 1624 aa18.12■□□□□ 0.49
SHF-203ENST00000558294 KIF21BO75037 1637 aa18.12■□□□□ 0.49
SHF-203ENST00000558294 RAPGEF6Q8TEU7 1601 aa18.12■□□□□ 0.49
SHF-203ENST00000558294 ILDR1Q86SU0 546 aaPredicted RBP18.08■□□□□ 0.48
SHF-203ENST00000558294 PHLDB1Q86UU1 1377 aa18.07■□□□□ 0.48
SHF-203ENST00000558294 NUP153P49790 1475 aaKnown RBP18.06■□□□□ 0.48
SHF-203ENST00000558294 EEA1Q15075 1411 aa18.05■□□□□ 0.48
SHF-203ENST00000558294 NEO1Q92859 1461 aa18.04■□□□□ 0.48
SHF-203ENST00000558294 FHOD3Q2V2M9 1422 aa18.02■□□□□ 0.48
SHF-203ENST00000558294 FRMPD1Q5SYB0 1578 aa18■□□□□ 0.47
SHF-203ENST00000558294 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18■□□□□ 0.47
SHF-203ENST00000558294 RAPGEF3O95398 923 aa18■□□□□ 0.47
SHF-203ENST00000558294 HNRNPUL2Q1KMD3 747 aaKnown RBP18■□□□□ 0.47
SHF-203ENST00000558294 ADAMTSL3P82987 1691 aa17.99■□□□□ 0.47
SHF-203ENST00000558294 RANGAP1P46060 587 aaPredicted RBP17.98■□□□□ 0.47
SHF-203ENST00000558294 PTPRMP28827 1452 aa17.95■□□□□ 0.46
SHF-203ENST00000558294 EFCAB5A4FU69 1503 aa17.94■□□□□ 0.46
SHF-203ENST00000558294 BCORL1Q5H9F3 1711 aa17.94■□□□□ 0.46
SHF-203ENST00000558294 PLEKHD1A6NEE1 506 aa17.92■□□□□ 0.46
SHF-203ENST00000558294 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.92■□□□□ 0.46
SHF-203ENST00000558294 RICTORQ6R327 1708 aa17.92■□□□□ 0.46
SHF-203ENST00000558294 ARHGEF40Q8TER5 1519 aa17.91■□□□□ 0.46
SHF-203ENST00000558294 DENND4BO75064 1496 aaPredicted RBP17.9■□□□□ 0.46
SHF-203ENST00000558294 CFAP74Q9C0B2 1584 aa17.9■□□□□ 0.46
SHF-203ENST00000558294 MADDQ8WXG6 1647 aa17.9■□□□□ 0.46
SHF-203ENST00000558294 AKNAQ7Z591 1439 aa17.89■□□□□ 0.46
SHF-203ENST00000558294 TTC37Q6PGP7 1564 aa17.89■□□□□ 0.45
SHF-203ENST00000558294 FANCAO15360 1455 aa17.88■□□□□ 0.45
SHF-203ENST00000558294 ARID4BQ4LE39 1312 aaPredicted RBP17.86■□□□□ 0.45
SHF-203ENST00000558294 CDK13Q14004 1512 aaKnown RBP17.86■□□□□ 0.45
SHF-203ENST00000558294 ZMYM4Q5VZL5 1548 aa17.85■□□□□ 0.45
SHF-203ENST00000558294 RIMS1Q86UR5 1692 aaKnown RBP17.82■□□□□ 0.44
SHF-203ENST00000558294 PCF11O94913 1555 aaKnown RBP17.82■□□□□ 0.44
SHF-203ENST00000558294 SIGLEC1Q9BZZ2 1709 aa17.81■□□□□ 0.44
SHF-203ENST00000558294 ZFYVE16Q7Z3T8 1539 aa17.8■□□□□ 0.44
SHF-203ENST00000558294 LMTK3Q96Q04 1460 aa17.8■□□□□ 0.44
SHF-203ENST00000558294 YEATS2Q9ULM3 1422 aa17.8■□□□□ 0.44
SHF-203ENST00000558294 MAGI2Q86UL8 1455 aa17.79■□□□□ 0.44
SHF-203ENST00000558294 PLCH2O75038 1416 aa17.79■□□□□ 0.44
SHF-203ENST00000558294 HECW1Q76N89 1606 aa17.78■□□□□ 0.44
SHF-203ENST00000558294 FMN1Q68DA7 1419 aa17.78■□□□□ 0.44
SHF-203ENST00000558294 ARHGAP35Q9NRY4 1499 aa17.77■□□□□ 0.44
SHF-203ENST00000558294 POGZQ7Z3K3 1410 aa17.76■□□□□ 0.43
SHF-203ENST00000558294 SCAPERQ9BY12 1400 aa17.76■□□□□ 0.43
SHF-203ENST00000558294 UBTFP17480 764 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms