RNA–Protein interactions for RNA: ENST00000557797.5

SHC4-204, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 821 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-204ENST00000557797 EVX2Q03828 476 aa15.16■□□□□ 0.02
SHC4-204ENST00000557797 NPM1P06748 294 aaKnown RBP eCLIP15.12■□□□□ 0.01
SHC4-204ENST00000557797 CD44P16070 742 aaKnown RBP15.08■□□□□ 0
SHC4-204ENST00000557797 IFNLR1Q8IU57 520 aaPredicted RBP15.08■□□□□ 0
SHC4-204ENST00000557797 ZBTB47Q9UFB7 747 aaPredicted RBP15.07■□□□□ 0
SHC4-204ENST00000557797 DCAF1Q9Y4B6 1507 aa15.03■□□□□ -0
SHC4-204ENST00000557797 SCRIBQ14160 1630 aa15.03■□□□□ -0
SHC4-204ENST00000557797 NUBP1P53384 320 aa15.01□□□□□ -0.01
SHC4-204ENST00000557797 RASEFQ8IZ41 740 aa15□□□□□ -0.01
SHC4-204ENST00000557797 KLHL34Q8N239 644 aa14.99□□□□□ -0.01
SHC4-204ENST00000557797 SP7Q8TDD2 431 aaPredicted RBP14.97□□□□□ -0.01
SHC4-204ENST00000557797 ZRANB1Q9UGI0 708 aa14.95□□□□□ -0.02
SHC4-204ENST00000557797 ZCCHC6Q5VYS8 1495 aaKnown RBP14.92□□□□□ -0.02
SHC4-204ENST00000557797 TSPYL2Q9H2G4 693 aaPredicted RBP14.91□□□□□ -0.02
SHC4-204ENST00000557797 ERCC6Q03468 1493 aa14.9□□□□□ -0.02
SHC4-204ENST00000557797 PAK3O75914 559 aaPredicted RBP14.9□□□□□ -0.02
SHC4-204ENST00000557797 ZNF579Q8NAF0 562 aaKnown RBP14.9□□□□□ -0.02
SHC4-204ENST00000557797 SPOCK2Q92563 424 aa14.87□□□□□ -0.03
SHC4-204ENST00000557797 CCDC61Q9Y6R9 512 aa14.86□□□□□ -0.03
SHC4-204ENST00000557797 TRIM41Q8WV44 630 aa14.84□□□□□ -0.03
SHC4-204ENST00000557797 PHF12Q96QT6 1004 aa14.84□□□□□ -0.03
SHC4-204ENST00000557797 FAM212AQ96EL1 285 aa14.82□□□□□ -0.04
SHC4-204ENST00000557797 GABBR2O75899 941 aa14.8□□□□□ -0.04
SHC4-204ENST00000557797 DCAF8Q5TAQ9 597 aa14.77□□□□□ -0.05
SHC4-204ENST00000557797 KIF12Q96FN5 646 aa14.72□□□□□ -0.05
SHC4-204ENST00000557797 GSE1Q14687 1217 aa14.71□□□□□ -0.05
SHC4-204ENST00000557797 CLCN6P51797 869 aa14.7□□□□□ -0.06
SHC4-204ENST00000557797 GALR2O43603 387 aaPredicted RBP14.69□□□□□ -0.06
SHC4-204ENST00000557797 MAP3K13O43283 966 aa14.67□□□□□ -0.06
SHC4-204ENST00000557797 NCAPD3P42695 1498 aa14.67□□□□□ -0.06
SHC4-204ENST00000557797 THOC2Q8NI27 1593 aaKnown RBP14.66□□□□□ -0.06
SHC4-204ENST00000557797 MS4A3Q96HJ5 214 aa14.66□□□□□ -0.06
SHC4-204ENST00000557797 CIZ1Q9ULV3 898 aaPredicted RBP14.66□□□□□ -0.06
SHC4-204ENST00000557797 PYGBP11216 843 aa14.65□□□□□ -0.06
SHC4-204ENST00000557797 NESP48681 1621 aa14.59□□□□□ -0.07
SHC4-204ENST00000557797 CHRM1P11229 460 aaPredicted RBP14.58□□□□□ -0.08
SHC4-204ENST00000557797 SGIP1Q9BQI5 828 aa14.57□□□□□ -0.08
SHC4-204ENST00000557797 PCDHB13Q9Y5F0 798 aa14.57□□□□□ -0.08
SHC4-204ENST00000557797 POTEIP0CG38 1075 aa14.55□□□□□ -0.08
SHC4-204ENST00000557797 IFNL1Q8IU54 200 aa14.55□□□□□ -0.08
SHC4-204ENST00000557797 TRPC6Q9Y210 931 aa14.54□□□□□ -0.08
SHC4-204ENST00000557797 HMGXB3Q12766 1538 aa14.51□□□□□ -0.09
SHC4-204ENST00000557797 PKD2Q13563 968 aa14.51□□□□□ -0.09
SHC4-204ENST00000557797 ATAD2BQ9ULI0 1458 aa14.5□□□□□ -0.09
SHC4-204ENST00000557797 PCDHB8Q9UN66 801 aa14.48□□□□□ -0.09
SHC4-204ENST00000557797 DCBLD2Q96PD2 775 aa14.47□□□□□ -0.09
SHC4-204ENST00000557797 LAMC3Q9Y6N6 1575 aa14.46□□□□□ -0.09
SHC4-204ENST00000557797 SMARCA2P51531 1590 aa14.44□□□□□ -0.1
SHC4-204ENST00000557797 KIF21AQ7Z4S6 1674 aa14.43□□□□□ -0.1
SHC4-204ENST00000557797 RNF25Q96BH1 459 aaPredicted RBP14.43□□□□□ -0.1
SHC4-204ENST00000557797 ASTLQ6HA08 431 aaPredicted RBP14.42□□□□□ -0.1
SHC4-204ENST00000557797 ZNF467Q7Z7K2 595 aaPredicted RBP14.42□□□□□ -0.1
SHC4-204ENST00000557797 BMP2KQ9NSY1 1161 aaPredicted RBP14.42□□□□□ -0.1
SHC4-204ENST00000557797 ATMINO43313 823 aaPredicted RBP14.41□□□□□ -0.1
SHC4-204ENST00000557797 TIE1P35590 1138 aa14.41□□□□□ -0.1
SHC4-204ENST00000557797 BAZ1AQ9NRL2 1556 aaPredicted RBP14.39□□□□□ -0.11
SHC4-204ENST00000557797 ECM2O94769 699 aaPredicted RBP14.38□□□□□ -0.11
SHC4-204ENST00000557797 PELP1Q8IZL8 1130 aaKnown RBP14.38□□□□□ -0.11
SHC4-204ENST00000557797 TTLL13PA6NNM8 815 aa14.37□□□□□ -0.11
SHC4-204ENST00000557797 ATN1P54259 1190 aaPredicted RBP14.36□□□□□ -0.11
SHC4-204ENST00000557797 PDS5BQ9NTI5 1447 aa14.35□□□□□ -0.11
SHC4-204ENST00000557797 TMEM106CQ9BVX2 250 aa14.32□□□□□ -0.12
SHC4-204ENST00000557797 SMARCA4P51532 1647 aa14.32□□□□□ -0.12
SHC4-204ENST00000557797 RIOK3O14730 519 aaKnown RBP14.31□□□□□ -0.12
SHC4-204ENST00000557797 RGL2O15211 777 aa14.3□□□□□ -0.12
SHC4-204ENST00000557797 BAZ1BQ9UIG0 1483 aaKnown RBP14.3□□□□□ -0.12
SHC4-204ENST00000557797 WDR62O43379 1518 aa14.3□□□□□ -0.12
SHC4-204ENST00000557797 PSEN1P49768 467 aa14.29□□□□□ -0.12
SHC4-204ENST00000557797 PDAP1Q13442 181 aaKnown RBP14.29□□□□□ -0.12
SHC4-204ENST00000557797 MRC2Q9UBG0 1479 aa14.28□□□□□ -0.12
SHC4-204ENST00000557797 TRIM35Q9UPQ4 493 aa14.26□□□□□ -0.13
SHC4-204ENST00000557797 RIMBP3CA6NJZ7 1639 aa14.25□□□□□ -0.13
SHC4-204ENST00000557797 RIMBP3BA6NNM3 1639 aa14.25□□□□□ -0.13
SHC4-204ENST00000557797 RIMBP3Q9UFD9 1639 aa14.25□□□□□ -0.13
SHC4-204ENST00000557797 PEG3Q9GZU2 1588 aa14.25□□□□□ -0.13
SHC4-204ENST00000557797 VGFO15240 615 aaPredicted RBP14.21□□□□□ -0.13
SHC4-204ENST00000557797 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.19□□□□□ -0.14
SHC4-204ENST00000557797 SLC39A7Q92504 469 aa14.19□□□□□ -0.14
SHC4-204ENST00000557797 ZFP91Q96JP5 570 aaPredicted RBP14.19□□□□□ -0.14
SHC4-204ENST00000557797 RTN4Q9NQC3 1192 aaKnown RBP14.19□□□□□ -0.14
SHC4-204ENST00000557797 METRNQ9UJH8 293 aa14.19□□□□□ -0.14
SHC4-204ENST00000557797 C7P10643 843 aa14.17□□□□□ -0.14
SHC4-204ENST00000557797 AMER1Q5JTC6 1135 aaPredicted RBP14.17□□□□□ -0.14
SHC4-204ENST00000557797 CADPSQ9ULU8 1353 aa14.15□□□□□ -0.14
SHC4-204ENST00000557797 POTEFA5A3E0 1075 aa14.15□□□□□ -0.14
SHC4-204ENST00000557797 IER5LQ5T953 404 aa14.14□□□□□ -0.15
SHC4-204ENST00000557797 ARHGEF11O15085 1522 aa14.13□□□□□ -0.15
SHC4-204ENST00000557797 CABP2Q9NPB3 220 aa14.12□□□□□ -0.15
SHC4-204ENST00000557797 COLQQ9Y215 455 aaPredicted RBP14.11□□□□□ -0.15
SHC4-204ENST00000557797 TAOK2Q9UL54 1235 aa14.1□□□□□ -0.15
SHC4-204ENST00000557797 POTEB2H3BUK9 544 aa14.09□□□□□ -0.15
SHC4-204ENST00000557797 IRX5P78411 483 aaPredicted RBP14.08□□□□□ -0.16
SHC4-204ENST00000557797 BCL11BQ9C0K0 894 aaPredicted RBP14.08□□□□□ -0.16
SHC4-204ENST00000557797 CEP164Q9UPV0 1460 aa14.07□□□□□ -0.16
SHC4-204ENST00000557797 GOLGA2Q08379 1002 aa14.06□□□□□ -0.16
SHC4-204ENST00000557797 STK25O00506 426 aa14.05□□□□□ -0.16
SHC4-204ENST00000557797 MKRN3Q13064 507 aaKnown RBP14.04□□□□□ -0.16
SHC4-204ENST00000557797 LHX8Q68G74 356 aa14.04□□□□□ -0.16
SHC4-204ENST00000557797 EFCAB3Q8N7B9 438 aa14.04□□□□□ -0.16
SHC4-204ENST00000557797 STK24Q9Y6E0 443 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms