RNA–Protein interactions for RNA: ENST00000557585.5

PRKCH-226, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-226ENST00000557585 CLASP1Q7Z460 1538 aa17.72■□□□□ 0.43
PRKCH-226ENST00000557585 CEP170Q5SW79 1584 aa17.72■□□□□ 0.43
PRKCH-226ENST00000557585 DMRT2Q9Y5R5 561 aa17.71■□□□□ 0.43
PRKCH-226ENST00000557585 PPP4R3CPQ6ZMV5 832 aa17.7■□□□□ 0.42
PRKCH-226ENST00000557585 CARMIL1Q5VZK9 1371 aa17.69■□□□□ 0.42
PRKCH-226ENST00000557585 NUP160Q12769 1436 aa17.69■□□□□ 0.42
PRKCH-226ENST00000557585 ARHGEF11O15085 1522 aa17.68■□□□□ 0.42
PRKCH-226ENST00000557585 RIMBP3CA6NJZ7 1639 aa17.66■□□□□ 0.42
PRKCH-226ENST00000557585 RIMBP3BA6NNM3 1639 aa17.66■□□□□ 0.42
PRKCH-226ENST00000557585 RIMBP3Q9UFD9 1639 aa17.66■□□□□ 0.42
PRKCH-226ENST00000557585 FAM9AQ8IZU1 332 aaPredicted RBP17.66■□□□□ 0.42
PRKCH-226ENST00000557585 ERCC6L2Q5T890 1561 aa17.62■□□□□ 0.41
PRKCH-226ENST00000557585 CUL7Q14999 1698 aa17.61■□□□□ 0.41
PRKCH-226ENST00000557585 ARAP1Q96P48 1450 aa17.58■□□□□ 0.41
PRKCH-226ENST00000557585 CYB5RLQ6IPT4 315 aa17.58■□□□□ 0.4
PRKCH-226ENST00000557585 RAPGEF2Q9Y4G8 1499 aa17.56■□□□□ 0.4
PRKCH-226ENST00000557585 CSRNP3Q8WYN3 585 aa17.55■□□□□ 0.4
PRKCH-226ENST00000557585 JPH4Q96JJ6 628 aa17.54■□□□□ 0.4
PRKCH-226ENST00000557585 PRXQ9BXM0 1461 aa17.54■□□□□ 0.4
PRKCH-226ENST00000557585 PRG4Q92954 1404 aaPredicted RBP17.51■□□□□ 0.39
PRKCH-226ENST00000557585 EHMT2Q96KQ7 1210 aa17.51■□□□□ 0.39
PRKCH-226ENST00000557585 KIAA0586Q9BVV6 1533 aa17.51■□□□□ 0.39
PRKCH-226ENST00000557585 SHROOM2Q13796 1616 aa17.5■□□□□ 0.39
PRKCH-226ENST00000557585 EEA1Q15075 1411 aa17.44■□□□□ 0.38
PRKCH-226ENST00000557585 TTBK1Q5TCY1 1321 aaPredicted RBP17.41■□□□□ 0.38
PRKCH-226ENST00000557585 IQGAP2Q13576 1575 aa17.4■□□□□ 0.38
PRKCH-226ENST00000557585 DISP1Q96F81 1524 aa17.37■□□□□ 0.37
PRKCH-226ENST00000557585 RANGAP1P46060 587 aaPredicted RBP17.35■□□□□ 0.37
PRKCH-226ENST00000557585 UGGT2Q9NYU1 1516 aa17.32■□□□□ 0.36
PRKCH-226ENST00000557585 CNKSR2Q8WXI2 1034 aa17.32■□□□□ 0.36
PRKCH-226ENST00000557585 P3H3Q8IVL6 736 aa17.31■□□□□ 0.36
PRKCH-226ENST00000557585 KIF21BO75037 1637 aa17.31■□□□□ 0.36
PRKCH-226ENST00000557585 CTTNBP2Q8WZ74 1663 aa17.3■□□□□ 0.36
PRKCH-226ENST00000557585 PTPRGP23470 1445 aa17.28■□□□□ 0.36
PRKCH-226ENST00000557585 TNIKQ9UKE5 1360 aa17.28■□□□□ 0.36
PRKCH-226ENST00000557585 CARMIL2Q6F5E8 1435 aa17.27■□□□□ 0.35
PRKCH-226ENST00000557585 KIAA0556O60303 1618 aa17.26■□□□□ 0.35
PRKCH-226ENST00000557585 UBTFP17480 764 aaKnown RBP17.26■□□□□ 0.35
PRKCH-226ENST00000557585 GOLGA3Q08378 1498 aa17.24■□□□□ 0.35
PRKCH-226ENST00000557585 ADCY10Q96PN6 1610 aa17.21■□□□□ 0.35
PRKCH-226ENST00000557585 PLB1Q6P1J6 1458 aa17.18■□□□□ 0.34
PRKCH-226ENST00000557585 TRHP20396 242 aaPredicted RBP17.17■□□□□ 0.34
PRKCH-226ENST00000557585 FHOD3Q2V2M9 1422 aa17.17■□□□□ 0.34
PRKCH-226ENST00000557585 LOC105371045A0A1W2PR82 267 aa17.16■□□□□ 0.34
PRKCH-226ENST00000557585 SAMD9Q5K651 1589 aa17.15■□□□□ 0.34
PRKCH-226ENST00000557585 UACAQ9BZF9 1416 aa17.15■□□□□ 0.34
PRKCH-226ENST00000557585 HOXD11P31277 338 aaPredicted RBP17.15■□□□□ 0.34
PRKCH-226ENST00000557585 ARID3CA6NKF2 412 aa17.14■□□□□ 0.33
PRKCH-226ENST00000557585 NCBP3Q53F19 620 aaKnown RBP17.12■□□□□ 0.33
PRKCH-226ENST00000557585 ABCC2Q92887 1545 aa17.11■□□□□ 0.33
PRKCH-226ENST00000557585 RNF216Q9NWF9 866 aaPredicted RBP17.1■□□□□ 0.33
PRKCH-226ENST00000557585 UHRF1BP1LA0JNW5 1464 aa17.09■□□□□ 0.33
PRKCH-226ENST00000557585 ARHGAP35Q9NRY4 1499 aa17.09■□□□□ 0.33
PRKCH-226ENST00000557585 ABCA8O94911 1581 aa17.09■□□□□ 0.33
PRKCH-226ENST00000557585 NPM1P06748 294 aaKnown RBP eCLIP17.08■□□□□ 0.32
PRKCH-226ENST00000557585 KDM5BQ9UGL1 1544 aa17.04■□□□□ 0.32
PRKCH-226ENST00000557585 ASXL2Q76L83 1435 aa17.03■□□□□ 0.32
PRKCH-226ENST00000557585 EFCAB5A4FU69 1503 aa17.02■□□□□ 0.32
PRKCH-226ENST00000557585 MAPKBP1O60336 1514 aa17.01■□□□□ 0.31
PRKCH-226ENST00000557585 ZCCHC11Q5TAX3 1644 aaKnown RBP17■□□□□ 0.31
PRKCH-226ENST00000557585 FAM69CQ0P6D2 419 aa17■□□□□ 0.31
PRKCH-226ENST00000557585 ATP10BO94823 1461 aa16.99■□□□□ 0.31
PRKCH-226ENST00000557585 NUP153P49790 1475 aaKnown RBP16.99■□□□□ 0.31
PRKCH-226ENST00000557585 CLIP1P30622 1438 aa16.98■□□□□ 0.31
PRKCH-226ENST00000557585 DCAF8L1A6NGE4 600 aa16.98■□□□□ 0.31
PRKCH-226ENST00000557585 ABCC10Q5T3U5 1492 aa16.98■□□□□ 0.31
PRKCH-226ENST00000557585 RAPGEF6Q8TEU7 1601 aa16.97■□□□□ 0.31
PRKCH-226ENST00000557585 DIP2BQ9P265 1576 aa16.95■□□□□ 0.3
PRKCH-226ENST00000557585 KIF13AQ9H1H9 1805 aa16.95■□□□□ 0.3
PRKCH-226ENST00000557585 ATP1B4Q9UN42 357 aaPredicted RBP16.94■□□□□ 0.3
PRKCH-226ENST00000557585 KCNH8Q96L42 1107 aa16.93■□□□□ 0.3
PRKCH-226ENST00000557585 CEP162Q5TB80 1403 aa16.93■□□□□ 0.3
PRKCH-226ENST00000557585 EPRSP07814 1512 aaKnown RBP16.91■□□□□ 0.3
PRKCH-226ENST00000557585 CDK13Q14004 1512 aaKnown RBP16.91■□□□□ 0.3
PRKCH-226ENST00000557585 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.91■□□□□ 0.3
PRKCH-226ENST00000557585 HNRNPUL2Q1KMD3 747 aaKnown RBP16.91■□□□□ 0.3
PRKCH-226ENST00000557585 WDR7Q9Y4E6 1490 aa16.9■□□□□ 0.3
PRKCH-226ENST00000557585 FMN1Q68DA7 1419 aa16.88■□□□□ 0.29
PRKCH-226ENST00000557585 PCF11O94913 1555 aaKnown RBP16.86■□□□□ 0.29
PRKCH-226ENST00000557585 NPM3O75607 178 aaKnown RBP16.84■□□□□ 0.29
PRKCH-226ENST00000557585 GLI2P10070 1586 aa16.82■□□□□ 0.28
PRKCH-226ENST00000557585 CASKIN1Q8WXD9 1431 aa16.82■□□□□ 0.28
PRKCH-226ENST00000557585 LRRIQ1Q96JM4 1722 aa16.82■□□□□ 0.28
PRKCH-226ENST00000557585 TSPOAP1O95153 1857 aa16.81■□□□□ 0.28
PRKCH-226ENST00000557585 HECW1Q76N89 1606 aa16.81■□□□□ 0.28
PRKCH-226ENST00000557585 PPRC1Q5VV67 1664 aaKnown RBP16.79■□□□□ 0.28
PRKCH-226ENST00000557585 PLEKHD1A6NEE1 506 aa16.78■□□□□ 0.28
PRKCH-226ENST00000557585 MAP3K4Q9Y6R4 1608 aa16.77■□□□□ 0.27
PRKCH-226ENST00000557585 MAGI3Q5TCQ9 1506 aa16.76■□□□□ 0.27
PRKCH-226ENST00000557585 CD109Q6YHK3 1445 aa16.76■□□□□ 0.27
PRKCH-226ENST00000557585 COL17A1Q9UMD9 1497 aaPredicted RBP16.75■□□□□ 0.27
PRKCH-226ENST00000557585 FYCO1Q9BQS8 1478 aa16.74■□□□□ 0.27
PRKCH-226ENST00000557585 KCNA4P22459 653 aa16.72■□□□□ 0.27
PRKCH-226ENST00000557585 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.71■□□□□ 0.27
PRKCH-226ENST00000557585 KIF14Q15058 1648 aa16.7■□□□□ 0.26
PRKCH-226ENST00000557585 ABCA9Q8IUA7 1624 aa16.7■□□□□ 0.26
PRKCH-226ENST00000557585 TTC37Q6PGP7 1564 aa16.7■□□□□ 0.26
PRKCH-226ENST00000557585 TROQ12816 1431 aaPredicted RBP16.69■□□□□ 0.26
PRKCH-226ENST00000557585 VPS8Q8N3P4 1428 aa16.69■□□□□ 0.26
PRKCH-226ENST00000557585 CFAP43Q8NDM7 1665 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 235.7 ms