RNA–Protein interactions for RNA: ENST00000557493.1

TGFB3-207, Transcript of transforming growth factor beta 3, humanhuman

TSL 4

Gene TGFB3, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-207ENST00000557493 KDM4FA0A1W2PPD8 638 aa17.41■□□□□ 0.38
TGFB3-207ENST00000557493 ABCC10Q5T3U5 1492 aa17.4■□□□□ 0.38
TGFB3-207ENST00000557493 FHAD1B1AJZ9 1412 aa17.38■□□□□ 0.37
TGFB3-207ENST00000557493 KIF27Q86VH2 1401 aa17.37■□□□□ 0.37
TGFB3-207ENST00000557493 PRG4Q92954 1404 aaPredicted RBP17.37■□□□□ 0.37
TGFB3-207ENST00000557493 NPM1P06748 294 aaKnown RBP eCLIP17.36■□□□□ 0.37
TGFB3-207ENST00000557493 FAM9AQ8IZU1 332 aaPredicted RBP17.36■□□□□ 0.37
TGFB3-207ENST00000557493 RUSC2Q8N2Y8 1516 aa17.35■□□□□ 0.37
TGFB3-207ENST00000557493 MAPKBP1O60336 1514 aa17.31■□□□□ 0.36
TGFB3-207ENST00000557493 JPH4Q96JJ6 628 aa17.31■□□□□ 0.36
TGFB3-207ENST00000557493 KDM6BO15054 1643 aa17.31■□□□□ 0.36
TGFB3-207ENST00000557493 DIP2BQ9P265 1576 aa17.3■□□□□ 0.36
TGFB3-207ENST00000557493 CSRNP3Q8WYN3 585 aa17.29■□□□□ 0.36
TGFB3-207ENST00000557493 KIF21BO75037 1637 aa17.29■□□□□ 0.36
TGFB3-207ENST00000557493 ERICH3Q5RHP9 1530 aa17.26■□□□□ 0.35
TGFB3-207ENST00000557493 GOLGA3Q08378 1498 aa17.23■□□□□ 0.35
TGFB3-207ENST00000557493 ADCY10Q96PN6 1610 aa17.19■□□□□ 0.34
TGFB3-207ENST00000557493 CUL7Q14999 1698 aa17.19■□□□□ 0.34
TGFB3-207ENST00000557493 PRXQ9BXM0 1461 aa17.18■□□□□ 0.34
TGFB3-207ENST00000557493 LOC105371045A0A1W2PR82 267 aa17.18■□□□□ 0.34
TGFB3-207ENST00000557493 IGF1RP08069 1367 aa17.15■□□□□ 0.34
TGFB3-207ENST00000557493 ADGRL1O94910 1474 aa17.13■□□□□ 0.33
TGFB3-207ENST00000557493 TSPOAP1O95153 1857 aa17.12■□□□□ 0.33
TGFB3-207ENST00000557493 RAPGEF2Q9Y4G8 1499 aa17.12■□□□□ 0.33
TGFB3-207ENST00000557493 TNIKQ9UKE5 1360 aa17.09■□□□□ 0.33
TGFB3-207ENST00000557493 CARMIL1Q5VZK9 1371 aa17.08■□□□□ 0.32
TGFB3-207ENST00000557493 EHMT2Q96KQ7 1210 aa17.07■□□□□ 0.32
TGFB3-207ENST00000557493 HECW2Q9P2P5 1572 aa17.06■□□□□ 0.32
TGFB3-207ENST00000557493 KIAA0586Q9BVV6 1533 aa17.06■□□□□ 0.32
TGFB3-207ENST00000557493 PTPRGP23470 1445 aa17.04■□□□□ 0.32
TGFB3-207ENST00000557493 UBTFP17480 764 aaKnown RBP17.03■□□□□ 0.32
TGFB3-207ENST00000557493 PLB1Q6P1J6 1458 aa17.02■□□□□ 0.32
TGFB3-207ENST00000557493 ABCC2Q92887 1545 aa17.01■□□□□ 0.31
TGFB3-207ENST00000557493 GLI2P10070 1586 aa17■□□□□ 0.31
TGFB3-207ENST00000557493 ASXL2Q76L83 1435 aa17■□□□□ 0.31
TGFB3-207ENST00000557493 CEP162Q5TB80 1403 aa16.99■□□□□ 0.31
TGFB3-207ENST00000557493 TTBK1Q5TCY1 1321 aaPredicted RBP16.97■□□□□ 0.31
TGFB3-207ENST00000557493 PPRC1Q5VV67 1664 aaKnown RBP16.97■□□□□ 0.31
TGFB3-207ENST00000557493 COL17A1Q9UMD9 1497 aaPredicted RBP16.96■□□□□ 0.31
TGFB3-207ENST00000557493 CTTNBP2Q8WZ74 1663 aa16.96■□□□□ 0.31
TGFB3-207ENST00000557493 FBXO41Q8TF61 875 aa16.95■□□□□ 0.3
TGFB3-207ENST00000557493 CARMIL2Q6F5E8 1435 aa16.95■□□□□ 0.3
TGFB3-207ENST00000557493 TEX14Q8IWB6 1497 aa16.93■□□□□ 0.3
TGFB3-207ENST00000557493 UHRF1BP1LA0JNW5 1464 aa16.91■□□□□ 0.3
TGFB3-207ENST00000557493 CLIP1P30622 1438 aa16.9■□□□□ 0.3
TGFB3-207ENST00000557493 EPRSP07814 1512 aaKnown RBP16.9■□□□□ 0.3
TGFB3-207ENST00000557493 UACAQ9BZF9 1416 aa16.87■□□□□ 0.29
TGFB3-207ENST00000557493 MAP3K4Q9Y6R4 1608 aa16.85■□□□□ 0.29
TGFB3-207ENST00000557493 EFCAB5A4FU69 1503 aa16.82■□□□□ 0.28
TGFB3-207ENST00000557493 KDM5BQ9UGL1 1544 aa16.82■□□□□ 0.28
TGFB3-207ENST00000557493 IQGAP2Q13576 1575 aa16.81■□□□□ 0.28
TGFB3-207ENST00000557493 ARHGAP35Q9NRY4 1499 aa16.77■□□□□ 0.28
TGFB3-207ENST00000557493 DISP1Q96F81 1524 aa16.75■□□□□ 0.27
TGFB3-207ENST00000557493 WDR7Q9Y4E6 1490 aa16.75■□□□□ 0.27
TGFB3-207ENST00000557493 VPS8Q8N3P4 1428 aa16.75■□□□□ 0.27
TGFB3-207ENST00000557493 SAMD9Q5K651 1589 aa16.75■□□□□ 0.27
TGFB3-207ENST00000557493 ZCCHC11Q5TAX3 1644 aaKnown RBP16.74■□□□□ 0.27
TGFB3-207ENST00000557493 RANGAP1P46060 587 aaPredicted RBP16.73■□□□□ 0.27
TGFB3-207ENST00000557493 CD109Q6YHK3 1445 aa16.72■□□□□ 0.27
TGFB3-207ENST00000557493 MAGI3Q5TCQ9 1506 aa16.72■□□□□ 0.27
TGFB3-207ENST00000557493 UGGT2Q9NYU1 1516 aa16.72■□□□□ 0.27
TGFB3-207ENST00000557493 LMTK3Q96Q04 1460 aa16.67■□□□□ 0.26
TGFB3-207ENST00000557493 PHF23Q9BUL5 403 aaPredicted RBP16.66■□□□□ 0.26
TGFB3-207ENST00000557493 PTPRMP28827 1452 aa16.66■□□□□ 0.26
TGFB3-207ENST00000557493 KCNH8Q96L42 1107 aa16.65■□□□□ 0.26
TGFB3-207ENST00000557493 KIAA0556O60303 1618 aa16.64■□□□□ 0.25
TGFB3-207ENST00000557493 CFAP43Q8NDM7 1665 aa16.64■□□□□ 0.25
TGFB3-207ENST00000557493 FHOD3Q2V2M9 1422 aa16.63■□□□□ 0.25
TGFB3-207ENST00000557493 FMN1Q68DA7 1419 aa16.62■□□□□ 0.25
TGFB3-207ENST00000557493 ARAP3Q8WWN8 1544 aa16.6■□□□□ 0.25
TGFB3-207ENST00000557493 PCF11O94913 1555 aaKnown RBP16.6■□□□□ 0.25
TGFB3-207ENST00000557493 FYCO1Q9BQS8 1478 aa16.58■□□□□ 0.24
TGFB3-207ENST00000557493 ADAMTSL3P82987 1691 aa16.57■□□□□ 0.24
TGFB3-207ENST00000557493 PHLDB1Q86UU1 1377 aa16.55■□□□□ 0.24
TGFB3-207ENST00000557493 P3H3Q8IVL6 736 aa16.55■□□□□ 0.24
TGFB3-207ENST00000557493 CASKIN1Q8WXD9 1431 aa16.54■□□□□ 0.24
TGFB3-207ENST00000557493 APLP2Q06481 763 aa16.54■□□□□ 0.24
TGFB3-207ENST00000557493 MAP3K1Q13233 1512 aa16.53■□□□□ 0.24
TGFB3-207ENST00000557493 ABCA8O94911 1581 aa16.52■□□□□ 0.24
TGFB3-207ENST00000557493 ARID4BQ4LE39 1312 aaPredicted RBP16.52■□□□□ 0.24
TGFB3-207ENST00000557493 HECW1Q76N89 1606 aa16.52■□□□□ 0.23
TGFB3-207ENST00000557493 TIAM1Q13009 1591 aa16.5■□□□□ 0.23
TGFB3-207ENST00000557493 SOCS7O14512 581 aa16.49■□□□□ 0.23
TGFB3-207ENST00000557493 RAPGEF3O95398 923 aa16.49■□□□□ 0.23
TGFB3-207ENST00000557493 CERKQ8TCT0 537 aa16.49■□□□□ 0.23
TGFB3-207ENST00000557493 MADDQ8WXG6 1647 aa16.48■□□□□ 0.23
TGFB3-207ENST00000557493 DISP3Q9P2K9 1392 aa16.48■□□□□ 0.23
TGFB3-207ENST00000557493 BCORL1Q5H9F3 1711 aa16.47■□□□□ 0.23
TGFB3-207ENST00000557493 HSPA2P54652 639 aa16.46■□□□□ 0.23
TGFB3-207ENST00000557493 CCDC18Q5T9S5 1454 aa16.46■□□□□ 0.23
TGFB3-207ENST00000557493 RAPGEF6Q8TEU7 1601 aa16.45■□□□□ 0.22
TGFB3-207ENST00000557493 ILDR2Q71H61 639 aa16.45■□□□□ 0.22
TGFB3-207ENST00000557493 NEO1Q92859 1461 aa16.45■□□□□ 0.22
TGFB3-207ENST00000557493 ARID3CA6NKF2 412 aa16.43■□□□□ 0.22
TGFB3-207ENST00000557493 LRRIQ1Q96JM4 1722 aa16.42■□□□□ 0.22
TGFB3-207ENST00000557493 ABCA9Q8IUA7 1624 aa16.41■□□□□ 0.22
TGFB3-207ENST00000557493 ATP10BO94823 1461 aa16.4■□□□□ 0.22
TGFB3-207ENST00000557493 PLPPR3Q6T4P5 718 aa16.39■□□□□ 0.21
TGFB3-207ENST00000557493 RIMS1Q86UR5 1692 aaKnown RBP16.38■□□□□ 0.21
TGFB3-207ENST00000557493 LRRC9Q6ZRR7 1453 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms