RNA–Protein interactions for RNA: ENST00000556980.5

XRCC3-217, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-217ENST00000556980 JPH4Q96JJ6 628 aa30.53■■■□□ 2.48
XRCC3-217ENST00000556980 PRG4Q92954 1404 aaPredicted RBP30.52■■■□□ 2.48
XRCC3-217ENST00000556980 KIAA0586Q9BVV6 1533 aa30.5■■■□□ 2.47
XRCC3-217ENST00000556980 RAPGEF2Q9Y4G8 1499 aa30.4■■■□□ 2.46
XRCC3-217ENST00000556980 TRHP20396 242 aaPredicted RBP30.34■■■□□ 2.45
XRCC3-217ENST00000556980 IQGAP2Q13576 1575 aa30.28■■■□□ 2.44
XRCC3-217ENST00000556980 PRXQ9BXM0 1461 aa30.22■■■□□ 2.43
XRCC3-217ENST00000556980 CARMIL2Q6F5E8 1435 aa30.22■■■□□ 2.43
XRCC3-217ENST00000556980 CSRNP3Q8WYN3 585 aa30.15■■■□□ 2.42
XRCC3-217ENST00000556980 EEA1Q15075 1411 aa30.14■■■□□ 2.42
XRCC3-217ENST00000556980 PTPRGP23470 1445 aa30.13■■■□□ 2.41
XRCC3-217ENST00000556980 TNIKQ9UKE5 1360 aa30.12■■■□□ 2.41
XRCC3-217ENST00000556980 UGGT2Q9NYU1 1516 aa30.11■■■□□ 2.41
XRCC3-217ENST00000556980 TTBK1Q5TCY1 1321 aaPredicted RBP30.1■■■□□ 2.41
XRCC3-217ENST00000556980 DISP1Q96F81 1524 aa30.08■■■□□ 2.41
XRCC3-217ENST00000556980 CHIC1Q5VXU3 224 aa30.08■■■□□ 2.41
XRCC3-217ENST00000556980 CTTNBP2Q8WZ74 1663 aa30.07■■■□□ 2.4
XRCC3-217ENST00000556980 NPM1P06748 294 aaKnown RBP eCLIP30.06■■■□□ 2.4
XRCC3-217ENST00000556980 ADCY10Q96PN6 1610 aa30.05■■■□□ 2.4
XRCC3-217ENST00000556980 FAM9AQ8IZU1 332 aaPredicted RBP30.02■■■□□ 2.4
XRCC3-217ENST00000556980 KIAA0556O60303 1618 aa30■■■□□ 2.39
XRCC3-217ENST00000556980 GOLGA3Q08378 1498 aa29.96■■■□□ 2.39
XRCC3-217ENST00000556980 MAPKBP1O60336 1514 aa29.92■■■□□ 2.38
XRCC3-217ENST00000556980 UACAQ9BZF9 1416 aa29.9■■■□□ 2.38
XRCC3-217ENST00000556980 UHRF1BP1LA0JNW5 1464 aa29.88■■■□□ 2.37
XRCC3-217ENST00000556980 ABCC2Q92887 1545 aa29.87■■■□□ 2.37
XRCC3-217ENST00000556980 KIF21BO75037 1637 aa29.82■■■□□ 2.36
XRCC3-217ENST00000556980 ABCC10Q5T3U5 1492 aa29.82■■■□□ 2.36
XRCC3-217ENST00000556980 FAM69CQ0P6D2 419 aa29.8■■■□□ 2.36
XRCC3-217ENST00000556980 KIF13AQ9H1H9 1805 aa29.77■■■□□ 2.36
XRCC3-217ENST00000556980 DIP2BQ9P265 1576 aa29.75■■■□□ 2.35
XRCC3-217ENST00000556980 PLB1Q6P1J6 1458 aa29.74■■■□□ 2.35
XRCC3-217ENST00000556980 KDM5BQ9UGL1 1544 aa29.73■■■□□ 2.35
XRCC3-217ENST00000556980 P3H3Q8IVL6 736 aa29.73■■■□□ 2.35
XRCC3-217ENST00000556980 ASXL2Q76L83 1435 aa29.72■■■□□ 2.35
XRCC3-217ENST00000556980 RANGAP1P46060 587 aaPredicted RBP29.7■■■□□ 2.35
XRCC3-217ENST00000556980 SAMD9Q5K651 1589 aa29.69■■■□□ 2.34
XRCC3-217ENST00000556980 EHMT2Q96KQ7 1210 aa29.68■■■□□ 2.34
XRCC3-217ENST00000556980 ABCA8O94911 1581 aa29.68■■■□□ 2.34
XRCC3-217ENST00000556980 ZCCHC11Q5TAX3 1644 aaKnown RBP29.66■■■□□ 2.34
XRCC3-217ENST00000556980 UBTFP17480 764 aaKnown RBP29.63■■■□□ 2.33
XRCC3-217ENST00000556980 EFCAB5A4FU69 1503 aa29.55■■■□□ 2.32
XRCC3-217ENST00000556980 FHOD3Q2V2M9 1422 aa29.55■■■□□ 2.32
XRCC3-217ENST00000556980 GLI2P10070 1586 aa29.54■■■□□ 2.32
XRCC3-217ENST00000556980 WDR7Q9Y4E6 1490 aa29.54■■■□□ 2.32
XRCC3-217ENST00000556980 EPRSP07814 1512 aaKnown RBP29.53■■■□□ 2.32
XRCC3-217ENST00000556980 ARID3CA6NKF2 412 aa29.5■■■□□ 2.31
XRCC3-217ENST00000556980 RAPGEF6Q8TEU7 1601 aa29.47■■■□□ 2.31
XRCC3-217ENST00000556980 TSPOAP1O95153 1857 aa29.45■■■□□ 2.31
XRCC3-217ENST00000556980 ATP10BO94823 1461 aa29.43■■■□□ 2.3
XRCC3-217ENST00000556980 KCNH8Q96L42 1107 aa29.4■■■□□ 2.3
XRCC3-217ENST00000556980 NUP153P49790 1475 aaKnown RBP29.39■■■□□ 2.3
XRCC3-217ENST00000556980 MAP3K4Q9Y6R4 1608 aa29.38■■■□□ 2.29
XRCC3-217ENST00000556980 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.37■■■□□ 2.29
XRCC3-217ENST00000556980 HNRNPUL2Q1KMD3 747 aaKnown RBP29.37■■■□□ 2.29
XRCC3-217ENST00000556980 KDM6BO15054 1643 aa29.36■■■□□ 2.29
XRCC3-217ENST00000556980 ARHGAP35Q9NRY4 1499 aa29.35■■■□□ 2.29
XRCC3-217ENST00000556980 PPRC1Q5VV67 1664 aaKnown RBP29.34■■■□□ 2.29
XRCC3-217ENST00000556980 TEX14Q8IWB6 1497 aa29.33■■■□□ 2.29
XRCC3-217ENST00000556980 FMN1Q68DA7 1419 aa29.3■■■□□ 2.28
XRCC3-217ENST00000556980 CD109Q6YHK3 1445 aa29.28■■■□□ 2.28
XRCC3-217ENST00000556980 CFAP43Q8NDM7 1665 aa29.25■■■□□ 2.27
XRCC3-217ENST00000556980 MAGI3Q5TCQ9 1506 aa29.22■■■□□ 2.27
XRCC3-217ENST00000556980 ATP1B4Q9UN42 357 aaPredicted RBP29.2■■■□□ 2.26
XRCC3-217ENST00000556980 PLEKHD1A6NEE1 506 aa29.19■■■□□ 2.26
XRCC3-217ENST00000556980 HECW1Q76N89 1606 aa29.17■■■□□ 2.26
XRCC3-217ENST00000556980 ABCA9Q8IUA7 1624 aa29.16■■■□□ 2.26
XRCC3-217ENST00000556980 CDK13Q14004 1512 aaKnown RBP29.15■■■□□ 2.26
XRCC3-217ENST00000556980 COL17A1Q9UMD9 1497 aaPredicted RBP29.13■■■□□ 2.25
XRCC3-217ENST00000556980 CLIP1P30622 1438 aa29.12■■■□□ 2.25
XRCC3-217ENST00000556980 CDK11AQ9UQ88 783 aaPredicted RBP29.04■■■□□ 2.24
XRCC3-217ENST00000556980 CASKIN1Q8WXD9 1431 aa29.03■■■□□ 2.24
XRCC3-217ENST00000556980 PCF11O94913 1555 aaKnown RBP29.02■■■□□ 2.24
XRCC3-217ENST00000556980 AEBP2Q6ZN18 517 aaPredicted RBP29.01■■■□□ 2.23
XRCC3-217ENST00000556980 PHLDB1Q86UU1 1377 aa29.01■■■□□ 2.23
XRCC3-217ENST00000556980 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.99■■■□□ 2.23
XRCC3-217ENST00000556980 ARAP3Q8WWN8 1544 aa28.98■■■□□ 2.23
XRCC3-217ENST00000556980 NEO1Q92859 1461 aa28.97■■■□□ 2.23
XRCC3-217ENST00000556980 CCDC18Q5T9S5 1454 aa28.96■■■□□ 2.23
XRCC3-217ENST00000556980 FYCO1Q9BQS8 1478 aa28.96■■■□□ 2.23
XRCC3-217ENST00000556980 TTC37Q6PGP7 1564 aa28.96■■■□□ 2.23
XRCC3-217ENST00000556980 CEP162Q5TB80 1403 aa28.94■■■□□ 2.22
XRCC3-217ENST00000556980 TROQ12816 1431 aaPredicted RBP28.93■■■□□ 2.22
XRCC3-217ENST00000556980 LRRIQ1Q96JM4 1722 aa28.9■■■□□ 2.22
XRCC3-217ENST00000556980 FANCAO15360 1455 aa28.89■■■□□ 2.22
XRCC3-217ENST00000556980 KIF14Q15058 1648 aa28.88■■■□□ 2.21
XRCC3-217ENST00000556980 LOC105371045A0A1W2PR82 267 aa28.86■■■□□ 2.21
XRCC3-217ENST00000556980 CFAP74Q9C0B2 1584 aa28.86■■■□□ 2.21
XRCC3-217ENST00000556980 PLCH2O75038 1416 aa28.84■■■□□ 2.21
XRCC3-217ENST00000556980 AKNAQ7Z591 1439 aa28.84■■■□□ 2.21
XRCC3-217ENST00000556980 RAPGEF3O95398 923 aa28.83■■■□□ 2.21
XRCC3-217ENST00000556980 KDM4FA0A1W2PPD8 638 aa28.79■■■□□ 2.2
XRCC3-217ENST00000556980 DENND4BO75064 1496 aaPredicted RBP28.78■■■□□ 2.2
XRCC3-217ENST00000556980 FRMPD1Q5SYB0 1578 aa28.76■■■□□ 2.19
XRCC3-217ENST00000556980 MYO5CQ9NQX4 1742 aa28.75■■■□□ 2.19
XRCC3-217ENST00000556980 ADGRL1O94910 1474 aa28.75■■■□□ 2.19
XRCC3-217ENST00000556980 EFCAB2Q5VUJ9 269 aa28.75■■■□□ 2.19
XRCC3-217ENST00000556980 ARHGAP5Q13017 1502 aa28.72■■■□□ 2.19
XRCC3-217ENST00000556980 SCAPERQ9BY12 1400 aa28.69■■■□□ 2.18
XRCC3-217ENST00000556980 RICTORQ6R327 1708 aa28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 162.5 ms