RNA–Protein interactions for RNA: ENST00000556913.1

LINC01588-212, Transcript of long intergenic non-protein coding RNA 1588, humanhuman

TSL 2

Gene LINC01588, Length 2,460 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01588-212ENST00000556913 VPS8Q8N3P4 1428 aa14.66□□□□□ -0.06
LINC01588-212ENST00000556913 MAGI1Q96QZ7 1491 aaPredicted RBP14.66□□□□□ -0.06
LINC01588-212ENST00000556913 TTBK1Q5TCY1 1321 aaPredicted RBP14.63□□□□□ -0.07
LINC01588-212ENST00000556913 GRIN2AQ12879 1464 aa14.63□□□□□ -0.07
LINC01588-212ENST00000556913 FBLN2P98095 1184 aa14.63□□□□□ -0.07
LINC01588-212ENST00000556913 P3H3Q8IVL6 736 aa14.63□□□□□ -0.07
LINC01588-212ENST00000556913 SYNJ2O15056 1496 aa14.62□□□□□ -0.07
LINC01588-212ENST00000556913 PCGF6Q9BYE7 350 aa14.61□□□□□ -0.07
LINC01588-212ENST00000556913 CHMP7Q8WUX9 453 aaPredicted RBP14.6□□□□□ -0.07
LINC01588-212ENST00000556913 IQGAP2Q13576 1575 aa14.6□□□□□ -0.07
LINC01588-212ENST00000556913 CHD1O14646 1710 aa14.59□□□□□ -0.07
LINC01588-212ENST00000556913 SLC24A1O60721 1099 aa14.58□□□□□ -0.07
LINC01588-212ENST00000556913 FHOD3Q2V2M9 1422 aa14.58□□□□□ -0.07
LINC01588-212ENST00000556913 EFCAB5A4FU69 1503 aa14.58□□□□□ -0.08
LINC01588-212ENST00000556913 CEP170Q5SW79 1584 aa14.58□□□□□ -0.08
LINC01588-212ENST00000556913 SAMD9Q5K651 1589 aa14.57□□□□□ -0.08
LINC01588-212ENST00000556913 TRIM26Q12899 539 aaPredicted RBP14.54□□□□□ -0.08
LINC01588-212ENST00000556913 KIAA0586Q9BVV6 1533 aa14.53□□□□□ -0.08
LINC01588-212ENST00000556913 APLP2Q06481 763 aa14.52□□□□□ -0.08
LINC01588-212ENST00000556913 PCF11O94913 1555 aaKnown RBP14.52□□□□□ -0.08
LINC01588-212ENST00000556913 NUP160Q12769 1436 aa14.49□□□□□ -0.09
LINC01588-212ENST00000556913 UGGT2Q9NYU1 1516 aa14.48□□□□□ -0.09
LINC01588-212ENST00000556913 ATP1B4Q9UN42 357 aaPredicted RBP14.47□□□□□ -0.09
LINC01588-212ENST00000556913 KIAA0556O60303 1618 aa14.46□□□□□ -0.09
LINC01588-212ENST00000556913 LRRIQ1Q96JM4 1722 aa14.46□□□□□ -0.1
LINC01588-212ENST00000556913 DISP1Q96F81 1524 aa14.45□□□□□ -0.1
LINC01588-212ENST00000556913 FMN1Q68DA7 1419 aa14.45□□□□□ -0.1
LINC01588-212ENST00000556913 KANK4Q5T7N3 995 aaPredicted RBP14.43□□□□□ -0.1
LINC01588-212ENST00000556913 TIAM1Q13009 1591 aa14.43□□□□□ -0.1
LINC01588-212ENST00000556913 FYCO1Q9BQS8 1478 aa14.42□□□□□ -0.1
LINC01588-212ENST00000556913 CFAP43Q8NDM7 1665 aa14.42□□□□□ -0.1
LINC01588-212ENST00000556913 CASKIN1Q8WXD9 1431 aa14.41□□□□□ -0.1
LINC01588-212ENST00000556913 JPH4Q96JJ6 628 aa14.41□□□□□ -0.1
LINC01588-212ENST00000556913 MAP3K1Q13233 1512 aa14.36□□□□□ -0.11
LINC01588-212ENST00000556913 CARMIL2Q6F5E8 1435 aa14.34□□□□□ -0.11
LINC01588-212ENST00000556913 HECW1Q76N89 1606 aa14.34□□□□□ -0.11
LINC01588-212ENST00000556913 LRRC9Q6ZRR7 1453 aa14.34□□□□□ -0.11
LINC01588-212ENST00000556913 SHROOM2Q13796 1616 aa14.33□□□□□ -0.11
LINC01588-212ENST00000556913 ARID3CA6NKF2 412 aa14.33□□□□□ -0.12
LINC01588-212ENST00000556913 PRG4Q92954 1404 aaPredicted RBP14.33□□□□□ -0.12
LINC01588-212ENST00000556913 RAPGEF6Q8TEU7 1601 aa14.32□□□□□ -0.12
LINC01588-212ENST00000556913 CLASP1Q7Z460 1538 aa14.32□□□□□ -0.12
LINC01588-212ENST00000556913 ERCC6L2Q5T890 1561 aa14.31□□□□□ -0.12
LINC01588-212ENST00000556913 CDK13Q14004 1512 aaKnown RBP14.3□□□□□ -0.12
LINC01588-212ENST00000556913 PLB1Q6P1J6 1458 aa14.29□□□□□ -0.12
LINC01588-212ENST00000556913 EPRSP07814 1512 aaKnown RBP14.29□□□□□ -0.12
LINC01588-212ENST00000556913 NUP153P49790 1475 aaKnown RBP14.27□□□□□ -0.13
LINC01588-212ENST00000556913 CCDC18Q5T9S5 1454 aa14.27□□□□□ -0.13
LINC01588-212ENST00000556913 MAGI3Q5TCQ9 1506 aa14.26□□□□□ -0.13
LINC01588-212ENST00000556913 MTUS2Q5JR59 1369 aa14.26□□□□□ -0.13
LINC01588-212ENST00000556913 PHLDB1Q86UU1 1377 aa14.23□□□□□ -0.13
LINC01588-212ENST00000556913 SUPT6HQ7KZ85 1726 aaKnown RBP14.23□□□□□ -0.13
LINC01588-212ENST00000556913 ABCA8O94911 1581 aa14.22□□□□□ -0.13
LINC01588-212ENST00000556913 EHBP1L1Q8N3D4 1523 aa14.22□□□□□ -0.13
LINC01588-212ENST00000556913 PTPRGP23470 1445 aa14.22□□□□□ -0.13
LINC01588-212ENST00000556913 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.22□□□□□ -0.13
LINC01588-212ENST00000556913 HNRNPUL2Q1KMD3 747 aaKnown RBP14.22□□□□□ -0.13
LINC01588-212ENST00000556913 RRBP1Q9P2E9 1410 aaKnown RBP14.2□□□□□ -0.14
LINC01588-212ENST00000556913 NCOA2Q15596 1464 aa14.18□□□□□ -0.14
LINC01588-212ENST00000556913 CCNB3Q8WWL7 1395 aa14.18□□□□□ -0.14
LINC01588-212ENST00000556913 OSCARQ8IYS5 282 aa14.18□□□□□ -0.14
LINC01588-212ENST00000556913 ITGAEP38570 1179 aa14.15□□□□□ -0.14
LINC01588-212ENST00000556913 ATP10BO94823 1461 aa14.13□□□□□ -0.15
LINC01588-212ENST00000556913 UACAQ9BZF9 1416 aa14.13□□□□□ -0.15
LINC01588-212ENST00000556913 ARHGEF11O15085 1522 aa14.13□□□□□ -0.15
LINC01588-212ENST00000556913 FAM50AQ14320 339 aaKnown RBP14.13□□□□□ -0.15
LINC01588-212ENST00000556913 KIF14Q15058 1648 aa14.12□□□□□ -0.15
LINC01588-212ENST00000556913 CDK11AQ9UQ88 783 aaPredicted RBP14.11□□□□□ -0.15
LINC01588-212ENST00000556913 FGD6Q6ZV73 1430 aa14.11□□□□□ -0.15
LINC01588-212ENST00000556913 ABCC2Q92887 1545 aa14.11□□□□□ -0.15
LINC01588-212ENST00000556913 MYOM3Q5VTT5 1437 aa14.1□□□□□ -0.15
LINC01588-212ENST00000556913 TROQ12816 1431 aaPredicted RBP14.1□□□□□ -0.15
LINC01588-212ENST00000556913 HRCP23327 699 aa14.09□□□□□ -0.15
LINC01588-212ENST00000556913 ADCY10Q96PN6 1610 aa14.08□□□□□ -0.16
LINC01588-212ENST00000556913 PTPN23Q9H3S7 1636 aa14.08□□□□□ -0.16
LINC01588-212ENST00000556913 ZCCHC11Q5TAX3 1644 aaKnown RBP14.07□□□□□ -0.16
LINC01588-212ENST00000556913 PLEKHD1A6NEE1 506 aa14.06□□□□□ -0.16
LINC01588-212ENST00000556913 CDC42BPAQ5VT25 1732 aa14.04□□□□□ -0.16
LINC01588-212ENST00000556913 ITSN2Q9NZM3 1697 aa14.03□□□□□ -0.16
LINC01588-212ENST00000556913 CCER1Q8TC90 406 aaPredicted RBP14.02□□□□□ -0.16
LINC01588-212ENST00000556913 UHRF1BP1LA0JNW5 1464 aa14.02□□□□□ -0.17
LINC01588-212ENST00000556913 KDM5BQ9UGL1 1544 aa14□□□□□ -0.17
LINC01588-212ENST00000556913 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14□□□□□ -0.17
LINC01588-212ENST00000556913 MIA2Q96PC5 1412 aa13.99□□□□□ -0.17
LINC01588-212ENST00000556913 GPATCH8Q9UKJ3 1502 aaKnown RBP13.98□□□□□ -0.17
LINC01588-212ENST00000556913 TCOF1Q13428 1488 aaKnown RBP13.98□□□□□ -0.17
LINC01588-212ENST00000556913 ZNF644Q9H582 1327 aaPredicted RBP13.98□□□□□ -0.17
LINC01588-212ENST00000556913 ABCC10Q5T3U5 1492 aa13.98□□□□□ -0.17
LINC01588-212ENST00000556913 PTPRKQ15262 1439 aa13.98□□□□□ -0.17
LINC01588-212ENST00000556913 TTC37Q6PGP7 1564 aa13.97□□□□□ -0.17
LINC01588-212ENST00000556913 CDC42BPBQ9Y5S2 1711 aa13.97□□□□□ -0.17
LINC01588-212ENST00000556913 KCNH8Q96L42 1107 aa13.96□□□□□ -0.17
LINC01588-212ENST00000556913 CFDP1Q9UEE9 299 aaPredicted RBP13.96□□□□□ -0.18
LINC01588-212ENST00000556913 ZNF777Q9ULD5 760 aaPredicted RBP13.96□□□□□ -0.18
LINC01588-212ENST00000556913 RIMBP3CA6NJZ7 1639 aa13.94□□□□□ -0.18
LINC01588-212ENST00000556913 RIMBP3BA6NNM3 1639 aa13.94□□□□□ -0.18
LINC01588-212ENST00000556913 RIMBP3Q9UFD9 1639 aa13.94□□□□□ -0.18
LINC01588-212ENST00000556913 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.94□□□□□ -0.18
LINC01588-212ENST00000556913 MYO5CQ9NQX4 1742 aa13.94□□□□□ -0.18
LINC01588-212ENST00000556913 CAMSAP2Q08AD1 1489 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms