RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 CUL7Q14999 1698 aa32.28■■■□□ 2.76
VIPAS39-209ENST00000556909 KIF27Q86VH2 1401 aa32.24■■■□□ 2.75
VIPAS39-209ENST00000556909 IGF1RP08069 1367 aa32.2■■■□□ 2.75
VIPAS39-209ENST00000556909 KIAA0586Q9BVV6 1533 aa32.18■■■□□ 2.74
VIPAS39-209ENST00000556909 ADCY10Q96PN6 1610 aa32.16■■■□□ 2.74
VIPAS39-209ENST00000556909 MAPKBP1O60336 1514 aa32.11■■■□□ 2.73
VIPAS39-209ENST00000556909 AEBP2Q6ZN18 517 aaPredicted RBP32.08■■■□□ 2.73
VIPAS39-209ENST00000556909 ABCC10Q5T3U5 1492 aa32.06■■■□□ 2.72
VIPAS39-209ENST00000556909 DIP2BQ9P265 1576 aa32.05■■■□□ 2.72
VIPAS39-209ENST00000556909 CARMIL1Q5VZK9 1371 aa32■■■□□ 2.71
VIPAS39-209ENST00000556909 NPM1P06748 294 aaKnown RBP eCLIP32■■■□□ 2.71
VIPAS39-209ENST00000556909 FAM69CQ0P6D2 419 aa31.96■■■□□ 2.71
VIPAS39-209ENST00000556909 IQGAP2Q13576 1575 aa31.92■■■□□ 2.7
VIPAS39-209ENST00000556909 PTPRGP23470 1445 aa31.87■■■□□ 2.69
VIPAS39-209ENST00000556909 TSPOAP1O95153 1857 aa31.86■■■□□ 2.69
VIPAS39-209ENST00000556909 CARMIL2Q6F5E8 1435 aa31.84■■■□□ 2.69
VIPAS39-209ENST00000556909 TNIKQ9UKE5 1360 aa31.82■■■□□ 2.69
VIPAS39-209ENST00000556909 ABCC2Q92887 1545 aa31.78■■■□□ 2.68
VIPAS39-209ENST00000556909 KDM6BO15054 1643 aa31.78■■■□□ 2.68
VIPAS39-209ENST00000556909 TTBK1Q5TCY1 1321 aaPredicted RBP31.76■■■□□ 2.68
VIPAS39-209ENST00000556909 DISP1Q96F81 1524 aa31.75■■■□□ 2.67
VIPAS39-209ENST00000556909 RAPGEF2Q9Y4G8 1499 aa31.73■■■□□ 2.67
VIPAS39-209ENST00000556909 UHRF1BP1LA0JNW5 1464 aa31.71■■■□□ 2.67
VIPAS39-209ENST00000556909 UGGT2Q9NYU1 1516 aa31.7■■■□□ 2.66
VIPAS39-209ENST00000556909 ASXL2Q76L83 1435 aa31.66■■■□□ 2.66
VIPAS39-209ENST00000556909 UACAQ9BZF9 1416 aa31.66■■■□□ 2.66
VIPAS39-209ENST00000556909 KIAA0556O60303 1618 aa31.65■■■□□ 2.66
VIPAS39-209ENST00000556909 PPRC1Q5VV67 1664 aaKnown RBP31.64■■■□□ 2.66
VIPAS39-209ENST00000556909 PLB1Q6P1J6 1458 aa31.64■■■□□ 2.66
VIPAS39-209ENST00000556909 GLI2P10070 1586 aa31.64■■■□□ 2.65
VIPAS39-209ENST00000556909 CTTNBP2Q8WZ74 1663 aa31.61■■■□□ 2.65
VIPAS39-209ENST00000556909 KDM5BQ9UGL1 1544 aa31.57■■■□□ 2.64
VIPAS39-209ENST00000556909 ZCCHC11Q5TAX3 1644 aaKnown RBP31.57■■■□□ 2.64
VIPAS39-209ENST00000556909 MAP3K4Q9Y6R4 1608 aa31.5■■■□□ 2.63
VIPAS39-209ENST00000556909 EPRSP07814 1512 aaKnown RBP31.49■■■□□ 2.63
VIPAS39-209ENST00000556909 KDM4FA0A1W2PPD8 638 aa31.42■■■□□ 2.62
VIPAS39-209ENST00000556909 GOLGA3Q08378 1498 aa31.39■■■□□ 2.62
VIPAS39-209ENST00000556909 PRXQ9BXM0 1461 aa31.39■■■□□ 2.62
VIPAS39-209ENST00000556909 WDR7Q9Y4E6 1490 aa31.36■■■□□ 2.61
VIPAS39-209ENST00000556909 TEX14Q8IWB6 1497 aa31.35■■■□□ 2.61
VIPAS39-209ENST00000556909 ABCA8O94911 1581 aa31.34■■■□□ 2.61
VIPAS39-209ENST00000556909 COL17A1Q9UMD9 1497 aaPredicted RBP31.33■■■□□ 2.61
VIPAS39-209ENST00000556909 CFAP43Q8NDM7 1665 aa31.25■■■□□ 2.59
VIPAS39-209ENST00000556909 ADGRL1O94910 1474 aa31.21■■■□□ 2.59
VIPAS39-209ENST00000556909 MAGI3Q5TCQ9 1506 aa31.16■■■□□ 2.58
VIPAS39-209ENST00000556909 CD109Q6YHK3 1445 aa31.14■■■□□ 2.58
VIPAS39-209ENST00000556909 SAMD9Q5K651 1589 aa31.11■■■□□ 2.57
VIPAS39-209ENST00000556909 KCNH8Q96L42 1107 aa31.08■■■□□ 2.57
VIPAS39-209ENST00000556909 P3H3Q8IVL6 736 aa31.03■■■□□ 2.56
VIPAS39-209ENST00000556909 ATP10BO94823 1461 aa31.02■■■□□ 2.56
VIPAS39-209ENST00000556909 CSRNP3Q8WYN3 585 aa31.02■■■□□ 2.56
VIPAS39-209ENST00000556909 RAPGEF6Q8TEU7 1601 aa31■■■□□ 2.55
VIPAS39-209ENST00000556909 ARID3CA6NKF2 412 aa30.98■■■□□ 2.55
VIPAS39-209ENST00000556909 ABCA9Q8IUA7 1624 aa30.97■■■□□ 2.55
VIPAS39-209ENST00000556909 FAM9AQ8IZU1 332 aaPredicted RBP30.96■■■□□ 2.55
VIPAS39-209ENST00000556909 EEA1Q15075 1411 aa30.94■■■□□ 2.54
VIPAS39-209ENST00000556909 KIF21BO75037 1637 aa30.92■■■□□ 2.54
VIPAS39-209ENST00000556909 ARAP3Q8WWN8 1544 aa30.92■■■□□ 2.54
VIPAS39-209ENST00000556909 HECW2Q9P2P5 1572 aa30.86■■■□□ 2.53
VIPAS39-209ENST00000556909 NUP153P49790 1475 aaKnown RBP30.85■■■□□ 2.53
VIPAS39-209ENST00000556909 FHOD3Q2V2M9 1422 aa30.82■■■□□ 2.52
VIPAS39-209ENST00000556909 PHLDB1Q86UU1 1377 aa30.79■■■□□ 2.52
VIPAS39-209ENST00000556909 NEO1Q92859 1461 aa30.77■■■□□ 2.52
VIPAS39-209ENST00000556909 RANGAP1P46060 587 aaPredicted RBP30.76■■■□□ 2.51
VIPAS39-209ENST00000556909 EFCAB5A4FU69 1503 aa30.75■■■□□ 2.51
VIPAS39-209ENST00000556909 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.74■■■□□ 2.51
VIPAS39-209ENST00000556909 HNRNPUL2Q1KMD3 747 aaKnown RBP30.74■■■□□ 2.51
VIPAS39-209ENST00000556909 FRMPD1Q5SYB0 1578 aa30.74■■■□□ 2.51
VIPAS39-209ENST00000556909 ADAMTSL3P82987 1691 aa30.65■■■□□ 2.5
VIPAS39-209ENST00000556909 RAPGEF3O95398 923 aa30.65■■■□□ 2.5
VIPAS39-209ENST00000556909 RICTORQ6R327 1708 aa30.61■■■□□ 2.49
VIPAS39-209ENST00000556909 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.61■■■□□ 2.49
VIPAS39-209ENST00000556909 CFAP74Q9C0B2 1584 aa30.61■■■□□ 2.49
VIPAS39-209ENST00000556909 TTC37Q6PGP7 1564 aa30.6■■■□□ 2.49
VIPAS39-209ENST00000556909 BCORL1Q5H9F3 1711 aa30.59■■■□□ 2.49
VIPAS39-209ENST00000556909 PLEKHD1A6NEE1 506 aa30.58■■■□□ 2.49
VIPAS39-209ENST00000556909 ARHGEF40Q8TER5 1519 aa30.57■■■□□ 2.49
VIPAS39-209ENST00000556909 ILDR1Q86SU0 546 aaPredicted RBP30.57■■■□□ 2.48
VIPAS39-209ENST00000556909 CDK13Q14004 1512 aaKnown RBP30.56■■■□□ 2.48
VIPAS39-209ENST00000556909 PTPRMP28827 1452 aa30.55■■■□□ 2.48
VIPAS39-209ENST00000556909 FANCAO15360 1455 aa30.54■■■□□ 2.48
VIPAS39-209ENST00000556909 DENND4BO75064 1496 aaPredicted RBP30.52■■■□□ 2.48
VIPAS39-209ENST00000556909 MADDQ8WXG6 1647 aa30.52■■■□□ 2.48
VIPAS39-209ENST00000556909 AKNAQ7Z591 1439 aa30.52■■■□□ 2.48
VIPAS39-209ENST00000556909 ZMYM4Q5VZL5 1548 aa30.47■■■□□ 2.47
VIPAS39-209ENST00000556909 HECW1Q76N89 1606 aa30.47■■■□□ 2.47
VIPAS39-209ENST00000556909 ARHGAP35Q9NRY4 1499 aa30.42■■■□□ 2.46
VIPAS39-209ENST00000556909 RIMS1Q86UR5 1692 aaKnown RBP30.42■■■□□ 2.46
VIPAS39-209ENST00000556909 ARID4BQ4LE39 1312 aaPredicted RBP30.42■■■□□ 2.46
VIPAS39-209ENST00000556909 FMN1Q68DA7 1419 aa30.41■■■□□ 2.46
VIPAS39-209ENST00000556909 SIGLEC1Q9BZZ2 1709 aa30.4■■■□□ 2.46
VIPAS39-209ENST00000556909 UBTFP17480 764 aaKnown RBP30.4■■■□□ 2.46
VIPAS39-209ENST00000556909 EHMT2Q96KQ7 1210 aa30.4■■■□□ 2.46
VIPAS39-209ENST00000556909 ZFYVE16Q7Z3T8 1539 aa30.39■■■□□ 2.46
VIPAS39-209ENST00000556909 MYO5CQ9NQX4 1742 aa30.39■■■□□ 2.45
VIPAS39-209ENST00000556909 PLCH2O75038 1416 aa30.35■■■□□ 2.45
VIPAS39-209ENST00000556909 YEATS2Q9ULM3 1422 aa30.34■■■□□ 2.45
VIPAS39-209ENST00000556909 LRRIQ1Q96JM4 1722 aa30.33■■■□□ 2.45
VIPAS39-209ENST00000556909 KIF14Q15058 1648 aa30.33■■■□□ 2.45
VIPAS39-209ENST00000556909 PCF11O94913 1555 aaKnown RBP30.33■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms