RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 TRHP20396 242 aaPredicted RBP21.7■■□□□ 1.06
SNX6-207ENST00000556303 ERCC6L2Q5T890 1561 aa21.66■■□□□ 1.06
SNX6-207ENST00000556303 PRG4Q92954 1404 aaPredicted RBP21.66■■□□□ 1.06
SNX6-207ENST00000556303 CARMIL1Q5VZK9 1371 aa21.65■■□□□ 1.06
SNX6-207ENST00000556303 KIAA0586Q9BVV6 1533 aa21.65■■□□□ 1.06
SNX6-207ENST00000556303 RUSC2Q8N2Y8 1516 aa21.63■■□□□ 1.05
SNX6-207ENST00000556303 RAPGEF2Q9Y4G8 1499 aa21.48■■□□□ 1.03
SNX6-207ENST00000556303 CARMIL2Q6F5E8 1435 aa21.44■■□□□ 1.02
SNX6-207ENST00000556303 NPM1P06748 294 aaKnown RBP eCLIP21.43■■□□□ 1.02
SNX6-207ENST00000556303 IQGAP2Q13576 1575 aa21.41■■□□□ 1.02
SNX6-207ENST00000556303 PTPRGP23470 1445 aa21.39■■□□□ 1.02
SNX6-207ENST00000556303 TNIKQ9UKE5 1360 aa21.38■■□□□ 1.01
SNX6-207ENST00000556303 MAPKBP1O60336 1514 aa21.34■■□□□ 1.01
SNX6-207ENST00000556303 ADCY10Q96PN6 1610 aa21.33■■□□□ 1
SNX6-207ENST00000556303 UGGT2Q9NYU1 1516 aa21.32■■□□□ 1
SNX6-207ENST00000556303 PRXQ9BXM0 1461 aa21.32■■□□□ 1
SNX6-207ENST00000556303 DISP1Q96F81 1524 aa21.29■■□□□ 1
SNX6-207ENST00000556303 ABCC10Q5T3U5 1492 aa21.29■■□□□ 1
SNX6-207ENST00000556303 UHRF1BP1LA0JNW5 1464 aa21.26■□□□□ 0.99
SNX6-207ENST00000556303 FAM69CQ0P6D2 419 aa21.25■□□□□ 0.99
SNX6-207ENST00000556303 CSRNP3Q8WYN3 585 aa21.24■□□□□ 0.99
SNX6-207ENST00000556303 KIF13AQ9H1H9 1805 aa21.24■□□□□ 0.99
SNX6-207ENST00000556303 EEA1Q15075 1411 aa21.23■□□□□ 0.99
SNX6-207ENST00000556303 UACAQ9BZF9 1416 aa21.23■□□□□ 0.99
SNX6-207ENST00000556303 ABCC2Q92887 1545 aa21.23■□□□□ 0.99
SNX6-207ENST00000556303 GOLGA3Q08378 1498 aa21.2■□□□□ 0.98
SNX6-207ENST00000556303 CTTNBP2Q8WZ74 1663 aa21.2■□□□□ 0.98
SNX6-207ENST00000556303 TTBK1Q5TCY1 1321 aaPredicted RBP21.2■□□□□ 0.98
SNX6-207ENST00000556303 KIAA0556O60303 1618 aa21.19■□□□□ 0.98
SNX6-207ENST00000556303 DIP2BQ9P265 1576 aa21.18■□□□□ 0.98
SNX6-207ENST00000556303 PLB1Q6P1J6 1458 aa21.15■□□□□ 0.98
SNX6-207ENST00000556303 KDM5BQ9UGL1 1544 aa21.13■□□□□ 0.97
SNX6-207ENST00000556303 FAM9AQ8IZU1 332 aaPredicted RBP21.11■□□□□ 0.97
SNX6-207ENST00000556303 ASXL2Q76L83 1435 aa21.11■□□□□ 0.97
SNX6-207ENST00000556303 GLI2P10070 1586 aa21.06■□□□□ 0.96
SNX6-207ENST00000556303 ABCA8O94911 1581 aa21.01■□□□□ 0.95
SNX6-207ENST00000556303 ZCCHC11Q5TAX3 1644 aaKnown RBP21■□□□□ 0.95
SNX6-207ENST00000556303 EPRSP07814 1512 aaKnown RBP20.99■□□□□ 0.95
SNX6-207ENST00000556303 WDR7Q9Y4E6 1490 aa20.95■□□□□ 0.94
SNX6-207ENST00000556303 TSPOAP1O95153 1857 aa20.95■□□□□ 0.94
SNX6-207ENST00000556303 SAMD9Q5K651 1589 aa20.95■□□□□ 0.94
SNX6-207ENST00000556303 KIF21BO75037 1637 aa20.94■□□□□ 0.94
SNX6-207ENST00000556303 KDM6BO15054 1643 aa20.93■□□□□ 0.94
SNX6-207ENST00000556303 P3H3Q8IVL6 736 aa20.92■□□□□ 0.94
SNX6-207ENST00000556303 TEX14Q8IWB6 1497 aa20.9■□□□□ 0.94
SNX6-207ENST00000556303 MAP3K4Q9Y6R4 1608 aa20.89■□□□□ 0.93
SNX6-207ENST00000556303 PPRC1Q5VV67 1664 aaKnown RBP20.87■□□□□ 0.93
SNX6-207ENST00000556303 ATP10BO94823 1461 aa20.86■□□□□ 0.93
SNX6-207ENST00000556303 EFCAB5A4FU69 1503 aa20.83■□□□□ 0.93
SNX6-207ENST00000556303 KCNH8Q96L42 1107 aa20.83■□□□□ 0.93
SNX6-207ENST00000556303 CD109Q6YHK3 1445 aa20.82■□□□□ 0.92
SNX6-207ENST00000556303 MAGI3Q5TCQ9 1506 aa20.82■□□□□ 0.92
SNX6-207ENST00000556303 RAPGEF6Q8TEU7 1601 aa20.82■□□□□ 0.92
SNX6-207ENST00000556303 UBTFP17480 764 aaKnown RBP20.8■□□□□ 0.92
SNX6-207ENST00000556303 CFAP43Q8NDM7 1665 aa20.8■□□□□ 0.92
SNX6-207ENST00000556303 FHOD3Q2V2M9 1422 aa20.79■□□□□ 0.92
SNX6-207ENST00000556303 RANGAP1P46060 587 aaPredicted RBP20.78■□□□□ 0.92
SNX6-207ENST00000556303 NUP153P49790 1475 aaKnown RBP20.75■□□□□ 0.91
SNX6-207ENST00000556303 COL17A1Q9UMD9 1497 aaPredicted RBP20.75■□□□□ 0.91
SNX6-207ENST00000556303 ARID3CA6NKF2 412 aa20.74■□□□□ 0.91
SNX6-207ENST00000556303 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.73■□□□□ 0.91
SNX6-207ENST00000556303 HNRNPUL2Q1KMD3 747 aaKnown RBP20.73■□□□□ 0.91
SNX6-207ENST00000556303 PHLDB1Q86UU1 1377 aa20.72■□□□□ 0.91
SNX6-207ENST00000556303 PLEKHD1A6NEE1 506 aa20.71■□□□□ 0.91
SNX6-207ENST00000556303 FMN1Q68DA7 1419 aa20.69■□□□□ 0.9
SNX6-207ENST00000556303 ABCA9Q8IUA7 1624 aa20.68■□□□□ 0.9
SNX6-207ENST00000556303 KDM4FA0A1W2PPD8 638 aa20.65■□□□□ 0.9
SNX6-207ENST00000556303 ARAP3Q8WWN8 1544 aa20.64■□□□□ 0.9
SNX6-207ENST00000556303 ARHGAP35Q9NRY4 1499 aa20.63■□□□□ 0.89
SNX6-207ENST00000556303 EHMT2Q96KQ7 1210 aa20.63■□□□□ 0.89
SNX6-207ENST00000556303 NEO1Q92859 1461 aa20.62■□□□□ 0.89
SNX6-207ENST00000556303 CDK11AQ9UQ88 783 aaPredicted RBP20.58■□□□□ 0.89
SNX6-207ENST00000556303 HECW1Q76N89 1606 aa20.55■□□□□ 0.88
SNX6-207ENST00000556303 ATP1B4Q9UN42 357 aaPredicted RBP20.51■□□□□ 0.87
SNX6-207ENST00000556303 CDK13Q14004 1512 aaKnown RBP20.51■□□□□ 0.87
SNX6-207ENST00000556303 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.51■□□□□ 0.87
SNX6-207ENST00000556303 ADGRL1O94910 1474 aa20.5■□□□□ 0.87
SNX6-207ENST00000556303 AKNAQ7Z591 1439 aa20.47■□□□□ 0.87
SNX6-207ENST00000556303 RAPGEF3O95398 923 aa20.47■□□□□ 0.87
SNX6-207ENST00000556303 FANCAO15360 1455 aa20.47■□□□□ 0.87
SNX6-207ENST00000556303 CFAP74Q9C0B2 1584 aa20.46■□□□□ 0.87
SNX6-207ENST00000556303 CASKIN1Q8WXD9 1431 aa20.46■□□□□ 0.87
SNX6-207ENST00000556303 PLCH2O75038 1416 aa20.45■□□□□ 0.86
SNX6-207ENST00000556303 TROQ12816 1431 aaPredicted RBP20.44■□□□□ 0.86
SNX6-207ENST00000556303 DENND4BO75064 1496 aaPredicted RBP20.43■□□□□ 0.86
SNX6-207ENST00000556303 CLIP1P30622 1438 aa20.43■□□□□ 0.86
SNX6-207ENST00000556303 CCDC18Q5T9S5 1454 aa20.43■□□□□ 0.86
SNX6-207ENST00000556303 TTC37Q6PGP7 1564 aa20.42■□□□□ 0.86
SNX6-207ENST00000556303 EFCAB2Q5VUJ9 269 aa20.4■□□□□ 0.86
SNX6-207ENST00000556303 FYCO1Q9BQS8 1478 aa20.37■□□□□ 0.85
SNX6-207ENST00000556303 FRMPD1Q5SYB0 1578 aa20.37■□□□□ 0.85
SNX6-207ENST00000556303 KIF14Q15058 1648 aa20.36■□□□□ 0.85
SNX6-207ENST00000556303 MAGI2Q86UL8 1455 aa20.36■□□□□ 0.85
SNX6-207ENST00000556303 RICTORQ6R327 1708 aa20.35■□□□□ 0.85
SNX6-207ENST00000556303 PCF11O94913 1555 aaKnown RBP20.34■□□□□ 0.85
SNX6-207ENST00000556303 SCAPERQ9BY12 1400 aa20.33■□□□□ 0.84
SNX6-207ENST00000556303 LRRIQ1Q96JM4 1722 aa20.33■□□□□ 0.84
SNX6-207ENST00000556303 MYO5CQ9NQX4 1742 aa20.33■□□□□ 0.84
SNX6-207ENST00000556303 ZMYM4Q5VZL5 1548 aa20.32■□□□□ 0.84
SNX6-207ENST00000556303 POGZQ7Z3K3 1410 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms