RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 WRNQ14191 1432 aaPredicted RBP eCLIP10.52□□□□□ -0.73
PRKCH-220ENST00000556164 BIVM-ERCC5R4GMW8 1640 aa10.52□□□□□ -0.73
PRKCH-220ENST00000556164 POTEDQ86YR6 584 aa10.52□□□□□ -0.73
PRKCH-220ENST00000556164 SHROOM2Q13796 1616 aa10.51□□□□□ -0.73
PRKCH-220ENST00000556164 NUP160Q12769 1436 aa10.51□□□□□ -0.73
PRKCH-220ENST00000556164 TOP2BQ02880 1626 aa10.51□□□□□ -0.73
PRKCH-220ENST00000556164 KIF13AQ9H1H9 1805 aa10.49□□□□□ -0.73
PRKCH-220ENST00000556164 SUPT5HO00267 1087 aaKnown RBP10.49□□□□□ -0.73
PRKCH-220ENST00000556164 FHAD1B1AJZ9 1412 aa10.49□□□□□ -0.73
PRKCH-220ENST00000556164 FOXD1Q16676 465 aa10.48□□□□□ -0.73
PRKCH-220ENST00000556164 RTN4Q9NQC3 1192 aaKnown RBP10.48□□□□□ -0.73
PRKCH-220ENST00000556164 ERICH3Q5RHP9 1530 aa10.47□□□□□ -0.73
PRKCH-220ENST00000556164 PRG4Q92954 1404 aaPredicted RBP10.43□□□□□ -0.74
PRKCH-220ENST00000556164 RUSC2Q8N2Y8 1516 aa10.41□□□□□ -0.74
PRKCH-220ENST00000556164 JPH4Q96JJ6 628 aa10.39□□□□□ -0.75
PRKCH-220ENST00000556164 ADCY10Q96PN6 1610 aa10.36□□□□□ -0.75
PRKCH-220ENST00000556164 TSPOAP1O95153 1857 aa10.36□□□□□ -0.75
PRKCH-220ENST00000556164 FAM69CQ0P6D2 419 aa10.36□□□□□ -0.75
PRKCH-220ENST00000556164 ABCC10Q5T3U5 1492 aa10.36□□□□□ -0.75
PRKCH-220ENST00000556164 DIP2BQ9P265 1576 aa10.35□□□□□ -0.75
PRKCH-220ENST00000556164 MAPKBP1O60336 1514 aa10.35□□□□□ -0.75
PRKCH-220ENST00000556164 NPM1P06748 294 aaKnown RBP eCLIP10.35□□□□□ -0.75
PRKCH-220ENST00000556164 KDM6BO15054 1643 aa10.32□□□□□ -0.76
PRKCH-220ENST00000556164 CUL7Q14999 1698 aa10.31□□□□□ -0.76
PRKCH-220ENST00000556164 KIAA0586Q9BVV6 1533 aa10.3□□□□□ -0.76
PRKCH-220ENST00000556164 KIF27Q86VH2 1401 aa10.28□□□□□ -0.76
PRKCH-220ENST00000556164 IGF1RP08069 1367 aa10.26□□□□□ -0.77
PRKCH-220ENST00000556164 TTBK1Q5TCY1 1321 aaPredicted RBP10.26□□□□□ -0.77
PRKCH-220ENST00000556164 PTPRGP23470 1445 aa10.24□□□□□ -0.77
PRKCH-220ENST00000556164 KDM4FA0A1W2PPD8 638 aa10.23□□□□□ -0.77
PRKCH-220ENST00000556164 PPP6R1Q9UPN7 881 aa10.23□□□□□ -0.77
PRKCH-220ENST00000556164 PPRC1Q5VV67 1664 aaKnown RBP10.22□□□□□ -0.77
PRKCH-220ENST00000556164 NCBP3Q53F19 620 aaKnown RBP10.22□□□□□ -0.77
PRKCH-220ENST00000556164 CARMIL1Q5VZK9 1371 aa10.22□□□□□ -0.77
PRKCH-220ENST00000556164 CARMIL2Q6F5E8 1435 aa10.22□□□□□ -0.77
PRKCH-220ENST00000556164 IQGAP2Q13576 1575 aa10.22□□□□□ -0.77
PRKCH-220ENST00000556164 TNIKQ9UKE5 1360 aa10.21□□□□□ -0.78
PRKCH-220ENST00000556164 ABCC2Q92887 1545 aa10.21□□□□□ -0.78
PRKCH-220ENST00000556164 ASXL2Q76L83 1435 aa10.2□□□□□ -0.78
PRKCH-220ENST00000556164 PLB1Q6P1J6 1458 aa10.19□□□□□ -0.78
PRKCH-220ENST00000556164 GLI2P10070 1586 aa10.18□□□□□ -0.78
PRKCH-220ENST00000556164 UHRF1BP1LA0JNW5 1464 aa10.17□□□□□ -0.78
PRKCH-220ENST00000556164 PPP4R3CPQ6ZMV5 832 aa10.16□□□□□ -0.78
PRKCH-220ENST00000556164 UACAQ9BZF9 1416 aa10.16□□□□□ -0.78
PRKCH-220ENST00000556164 ZCCHC11Q5TAX3 1644 aaKnown RBP10.15□□□□□ -0.78
PRKCH-220ENST00000556164 MAP3K4Q9Y6R4 1608 aa10.15□□□□□ -0.78
PRKCH-220ENST00000556164 DISP1Q96F81 1524 aa10.15□□□□□ -0.78
PRKCH-220ENST00000556164 ADGRL1O94910 1474 aa10.15□□□□□ -0.78
PRKCH-220ENST00000556164 EPRSP07814 1512 aaKnown RBP10.13□□□□□ -0.79
PRKCH-220ENST00000556164 KIAA0556O60303 1618 aa10.13□□□□□ -0.79
PRKCH-220ENST00000556164 UGGT2Q9NYU1 1516 aa10.12□□□□□ -0.79
PRKCH-220ENST00000556164 KDM5BQ9UGL1 1544 aa10.12□□□□□ -0.79
PRKCH-220ENST00000556164 TEX14Q8IWB6 1497 aa10.12□□□□□ -0.79
PRKCH-220ENST00000556164 COL17A1Q9UMD9 1497 aaPredicted RBP10.11□□□□□ -0.79
PRKCH-220ENST00000556164 RAPGEF2Q9Y4G8 1499 aa10.11□□□□□ -0.79
PRKCH-220ENST00000556164 CTTNBP2Q8WZ74 1663 aa10.11□□□□□ -0.79
PRKCH-220ENST00000556164 ZBTB22O15209 634 aa10.09□□□□□ -0.79
PRKCH-220ENST00000556164 ILDR1Q86SU0 546 aaPredicted RBP10.09□□□□□ -0.79
PRKCH-220ENST00000556164 WDR7Q9Y4E6 1490 aa10.08□□□□□ -0.8
PRKCH-220ENST00000556164 HECW2Q9P2P5 1572 aa10.08□□□□□ -0.8
PRKCH-220ENST00000556164 CFAP43Q8NDM7 1665 aa10.07□□□□□ -0.8
PRKCH-220ENST00000556164 GOLGA3Q08378 1498 aa10.04□□□□□ -0.8
PRKCH-220ENST00000556164 ABCA8O94911 1581 aa10.03□□□□□ -0.8
PRKCH-220ENST00000556164 CD109Q6YHK3 1445 aa10.02□□□□□ -0.81
PRKCH-220ENST00000556164 KCNH8Q96L42 1107 aa10.02□□□□□ -0.81
PRKCH-220ENST00000556164 KIF21BO75037 1637 aa10.02□□□□□ -0.81
PRKCH-220ENST00000556164 MAGI3Q5TCQ9 1506 aa10.02□□□□□ -0.81
PRKCH-220ENST00000556164 NPM3O75607 178 aaKnown RBP10.01□□□□□ -0.81
PRKCH-220ENST00000556164 ARID3CA6NKF2 412 aa9.96□□□□□ -0.82
PRKCH-220ENST00000556164 PRXQ9BXM0 1461 aa9.95□□□□□ -0.82
PRKCH-220ENST00000556164 ABCA9Q8IUA7 1624 aa9.94□□□□□ -0.82
PRKCH-220ENST00000556164 ARAP3Q8WWN8 1544 aa9.94□□□□□ -0.82
PRKCH-220ENST00000556164 FAM9AQ8IZU1 332 aaPredicted RBP9.94□□□□□ -0.82
PRKCH-220ENST00000556164 MSH5O43196 834 aa9.93□□□□□ -0.82
PRKCH-220ENST00000556164 P3H3Q8IVL6 736 aa9.93□□□□□ -0.82
PRKCH-220ENST00000556164 ATP10BO94823 1461 aa9.92□□□□□ -0.82
PRKCH-220ENST00000556164 ADAMTSL3P82987 1691 aa9.92□□□□□ -0.82
PRKCH-220ENST00000556164 RAPGEF6Q8TEU7 1601 aa9.92□□□□□ -0.82
PRKCH-220ENST00000556164 SAMD9Q5K651 1589 aa9.91□□□□□ -0.82
PRKCH-220ENST00000556164 PTPRMP28827 1452 aa9.9□□□□□ -0.83
PRKCH-220ENST00000556164 BCORL1Q5H9F3 1711 aa9.9□□□□□ -0.83
PRKCH-220ENST00000556164 PHLDB1Q86UU1 1377 aa9.89□□□□□ -0.83
PRKCH-220ENST00000556164 FRMPD1Q5SYB0 1578 aa9.88□□□□□ -0.83
PRKCH-220ENST00000556164 NEO1Q92859 1461 aa9.88□□□□□ -0.83
PRKCH-220ENST00000556164 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.88□□□□□ -0.83
PRKCH-220ENST00000556164 RAPGEF3O95398 923 aa9.88□□□□□ -0.83
PRKCH-220ENST00000556164 HNRNPUL2Q1KMD3 747 aaKnown RBP9.88□□□□□ -0.83
PRKCH-220ENST00000556164 MADDQ8WXG6 1647 aa9.88□□□□□ -0.83
PRKCH-220ENST00000556164 FOXD4L1Q9NU39 408 aa9.87□□□□□ -0.83
PRKCH-220ENST00000556164 ARID4BQ4LE39 1312 aaPredicted RBP9.86□□□□□ -0.83
PRKCH-220ENST00000556164 RIMS1Q86UR5 1692 aaKnown RBP9.86□□□□□ -0.83
PRKCH-220ENST00000556164 RICTORQ6R327 1708 aa9.85□□□□□ -0.83
PRKCH-220ENST00000556164 PCF11O94913 1555 aaKnown RBP9.85□□□□□ -0.83
PRKCH-220ENST00000556164 FBXO41Q8TF61 875 aa9.85□□□□□ -0.83
PRKCH-220ENST00000556164 ARHGEF40Q8TER5 1519 aa9.85□□□□□ -0.83
PRKCH-220ENST00000556164 NUP153P49790 1475 aaKnown RBP9.85□□□□□ -0.83
PRKCH-220ENST00000556164 RANGAP1P46060 587 aaPredicted RBP9.84□□□□□ -0.83
PRKCH-220ENST00000556164 CFAP74Q9C0B2 1584 aa9.84□□□□□ -0.83
PRKCH-220ENST00000556164 FHOD3Q2V2M9 1422 aa9.83□□□□□ -0.84
PRKCH-220ENST00000556164 DENND4BO75064 1496 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms