RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 KIAA0586Q9BVV6 1533 aa13.49□□□□□ -0.25
PTCSC3-201ENST00000556013 NPM1P06748 294 aaKnown RBP eCLIP13.47□□□□□ -0.25
PTCSC3-201ENST00000556013 CARMIL1Q5VZK9 1371 aa13.46□□□□□ -0.25
PTCSC3-201ENST00000556013 CUL7Q14999 1698 aa13.44□□□□□ -0.26
PTCSC3-201ENST00000556013 RUSC2Q8N2Y8 1516 aa13.42□□□□□ -0.26
PTCSC3-201ENST00000556013 PTPRGP23470 1445 aa13.37□□□□□ -0.27
PTCSC3-201ENST00000556013 CARMIL2Q6F5E8 1435 aa13.37□□□□□ -0.27
PTCSC3-201ENST00000556013 FAM69CQ0P6D2 419 aa13.36□□□□□ -0.27
PTCSC3-201ENST00000556013 ABCC10Q5T3U5 1492 aa13.36□□□□□ -0.27
PTCSC3-201ENST00000556013 MAPKBP1O60336 1514 aa13.34□□□□□ -0.27
PTCSC3-201ENST00000556013 TNIKQ9UKE5 1360 aa13.34□□□□□ -0.27
PTCSC3-201ENST00000556013 RAPGEF2Q9Y4G8 1499 aa13.32□□□□□ -0.28
PTCSC3-201ENST00000556013 AEBP2Q6ZN18 517 aaPredicted RBP13.3□□□□□ -0.28
PTCSC3-201ENST00000556013 ADCY10Q96PN6 1610 aa13.28□□□□□ -0.28
PTCSC3-201ENST00000556013 IQGAP2Q13576 1575 aa13.28□□□□□ -0.28
PTCSC3-201ENST00000556013 KIF13AQ9H1H9 1805 aa13.27□□□□□ -0.28
PTCSC3-201ENST00000556013 UHRF1BP1LA0JNW5 1464 aa13.27□□□□□ -0.29
PTCSC3-201ENST00000556013 ABCC2Q92887 1545 aa13.25□□□□□ -0.29
PTCSC3-201ENST00000556013 UGGT2Q9NYU1 1516 aa13.25□□□□□ -0.29
PTCSC3-201ENST00000556013 UACAQ9BZF9 1416 aa13.25□□□□□ -0.29
PTCSC3-201ENST00000556013 DISP1Q96F81 1524 aa13.23□□□□□ -0.29
PTCSC3-201ENST00000556013 PLB1Q6P1J6 1458 aa13.23□□□□□ -0.29
PTCSC3-201ENST00000556013 DIP2BQ9P265 1576 aa13.23□□□□□ -0.29
PTCSC3-201ENST00000556013 TTBK1Q5TCY1 1321 aaPredicted RBP13.21□□□□□ -0.29
PTCSC3-201ENST00000556013 FAM9AQ8IZU1 332 aaPredicted RBP13.2□□□□□ -0.3
PTCSC3-201ENST00000556013 PRXQ9BXM0 1461 aa13.2□□□□□ -0.3
PTCSC3-201ENST00000556013 KDM5BQ9UGL1 1544 aa13.19□□□□□ -0.3
PTCSC3-201ENST00000556013 ASXL2Q76L83 1435 aa13.19□□□□□ -0.3
PTCSC3-201ENST00000556013 GOLGA3Q08378 1498 aa13.17□□□□□ -0.3
PTCSC3-201ENST00000556013 GLI2P10070 1586 aa13.17□□□□□ -0.3
PTCSC3-201ENST00000556013 CSRNP3Q8WYN3 585 aa13.17□□□□□ -0.3
PTCSC3-201ENST00000556013 KIAA0556O60303 1618 aa13.14□□□□□ -0.31
PTCSC3-201ENST00000556013 EPRSP07814 1512 aaKnown RBP13.11□□□□□ -0.31
PTCSC3-201ENST00000556013 EEA1Q15075 1411 aa13.11□□□□□ -0.31
PTCSC3-201ENST00000556013 KDM6BO15054 1643 aa13.1□□□□□ -0.31
PTCSC3-201ENST00000556013 TEX14Q8IWB6 1497 aa13.08□□□□□ -0.32
PTCSC3-201ENST00000556013 CTTNBP2Q8WZ74 1663 aa13.07□□□□□ -0.32
PTCSC3-201ENST00000556013 TSPOAP1O95153 1857 aa13.06□□□□□ -0.32
PTCSC3-201ENST00000556013 WDR7Q9Y4E6 1490 aa13.06□□□□□ -0.32
PTCSC3-201ENST00000556013 ABCA8O94911 1581 aa13.06□□□□□ -0.32
PTCSC3-201ENST00000556013 KDM4FA0A1W2PPD8 638 aa13.05□□□□□ -0.32
PTCSC3-201ENST00000556013 ZCCHC11Q5TAX3 1644 aaKnown RBP13.05□□□□□ -0.32
PTCSC3-201ENST00000556013 CD109Q6YHK3 1445 aa13.03□□□□□ -0.32
PTCSC3-201ENST00000556013 MAP3K4Q9Y6R4 1608 aa13.02□□□□□ -0.32
PTCSC3-201ENST00000556013 KCNH8Q96L42 1107 aa13.02□□□□□ -0.33
PTCSC3-201ENST00000556013 COL17A1Q9UMD9 1497 aaPredicted RBP13.02□□□□□ -0.33
PTCSC3-201ENST00000556013 MAGI3Q5TCQ9 1506 aa13.02□□□□□ -0.33
PTCSC3-201ENST00000556013 PPRC1Q5VV67 1664 aaKnown RBP13.02□□□□□ -0.33
PTCSC3-201ENST00000556013 PHLDB1Q86UU1 1377 aa13□□□□□ -0.33
PTCSC3-201ENST00000556013 P3H3Q8IVL6 736 aa13□□□□□ -0.33
PTCSC3-201ENST00000556013 ATP10BO94823 1461 aa12.99□□□□□ -0.33
PTCSC3-201ENST00000556013 SAMD9Q5K651 1589 aa12.95□□□□□ -0.34
PTCSC3-201ENST00000556013 CFAP43Q8NDM7 1665 aa12.95□□□□□ -0.34
PTCSC3-201ENST00000556013 PLEKHD1A6NEE1 506 aa12.93□□□□□ -0.34
PTCSC3-201ENST00000556013 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.92□□□□□ -0.34
PTCSC3-201ENST00000556013 HNRNPUL2Q1KMD3 747 aaKnown RBP12.92□□□□□ -0.34
PTCSC3-201ENST00000556013 ARAP3Q8WWN8 1544 aa12.92□□□□□ -0.34
PTCSC3-201ENST00000556013 CHIC1Q5VXU3 224 aa12.91□□□□□ -0.34
PTCSC3-201ENST00000556013 RAPGEF6Q8TEU7 1601 aa12.89□□□□□ -0.35
PTCSC3-201ENST00000556013 ARID3CA6NKF2 412 aa12.89□□□□□ -0.35
PTCSC3-201ENST00000556013 KIF21BO75037 1637 aa12.88□□□□□ -0.35
PTCSC3-201ENST00000556013 ADGRL1O94910 1474 aa12.88□□□□□ -0.35
PTCSC3-201ENST00000556013 NUP153P49790 1475 aaKnown RBP12.88□□□□□ -0.35
PTCSC3-201ENST00000556013 EFCAB5A4FU69 1503 aa12.88□□□□□ -0.35
PTCSC3-201ENST00000556013 NEO1Q92859 1461 aa12.87□□□□□ -0.35
PTCSC3-201ENST00000556013 UBTFP17480 764 aaKnown RBP12.87□□□□□ -0.35
PTCSC3-201ENST00000556013 ABCA9Q8IUA7 1624 aa12.87□□□□□ -0.35
PTCSC3-201ENST00000556013 FHOD3Q2V2M9 1422 aa12.87□□□□□ -0.35
PTCSC3-201ENST00000556013 RANGAP1P46060 587 aaPredicted RBP12.86□□□□□ -0.35
PTCSC3-201ENST00000556013 CDK11AQ9UQ88 783 aaPredicted RBP12.83□□□□□ -0.36
PTCSC3-201ENST00000556013 FMN1Q68DA7 1419 aa12.82□□□□□ -0.36
PTCSC3-201ENST00000556013 RAPGEF3O95398 923 aa12.81□□□□□ -0.36
PTCSC3-201ENST00000556013 AKNAQ7Z591 1439 aa12.78□□□□□ -0.36
PTCSC3-201ENST00000556013 DENND4BO75064 1496 aaPredicted RBP12.77□□□□□ -0.37
PTCSC3-201ENST00000556013 PLCH2O75038 1416 aa12.75□□□□□ -0.37
PTCSC3-201ENST00000556013 ARHGAP35Q9NRY4 1499 aa12.75□□□□□ -0.37
PTCSC3-201ENST00000556013 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.74□□□□□ -0.37
PTCSC3-201ENST00000556013 FANCAO15360 1455 aa12.74□□□□□ -0.37
PTCSC3-201ENST00000556013 EFCAB2Q5VUJ9 269 aa12.74□□□□□ -0.37
PTCSC3-201ENST00000556013 ATP1B4Q9UN42 357 aaPredicted RBP12.73□□□□□ -0.37
PTCSC3-201ENST00000556013 MAGI2Q86UL8 1455 aa12.72□□□□□ -0.37
PTCSC3-201ENST00000556013 ARID4BQ4LE39 1312 aaPredicted RBP12.7□□□□□ -0.38
PTCSC3-201ENST00000556013 CFAP74Q9C0B2 1584 aa12.7□□□□□ -0.38
PTCSC3-201ENST00000556013 EHMT2Q96KQ7 1210 aa12.7□□□□□ -0.38
PTCSC3-201ENST00000556013 TROQ12816 1431 aaPredicted RBP12.69□□□□□ -0.38
PTCSC3-201ENST00000556013 SCAPERQ9BY12 1400 aa12.69□□□□□ -0.38
PTCSC3-201ENST00000556013 HECW1Q76N89 1606 aa12.69□□□□□ -0.38
PTCSC3-201ENST00000556013 CDK13Q14004 1512 aaKnown RBP12.68□□□□□ -0.38
PTCSC3-201ENST00000556013 POGZQ7Z3K3 1410 aa12.68□□□□□ -0.38
PTCSC3-201ENST00000556013 ADAMTSL3P82987 1691 aa12.67□□□□□ -0.38
PTCSC3-201ENST00000556013 PTPRMP28827 1452 aa12.67□□□□□ -0.38
PTCSC3-201ENST00000556013 CLIP1P30622 1438 aa12.67□□□□□ -0.38
PTCSC3-201ENST00000556013 FRMPD1Q5SYB0 1578 aa12.67□□□□□ -0.38
PTCSC3-201ENST00000556013 ZMYM4Q5VZL5 1548 aa12.67□□□□□ -0.38
PTCSC3-201ENST00000556013 CASKIN1Q8WXD9 1431 aa12.66□□□□□ -0.38
PTCSC3-201ENST00000556013 TTC37Q6PGP7 1564 aa12.65□□□□□ -0.38
PTCSC3-201ENST00000556013 HECW2Q9P2P5 1572 aa12.65□□□□□ -0.38
PTCSC3-201ENST00000556013 RICTORQ6R327 1708 aa12.65□□□□□ -0.38
PTCSC3-201ENST00000556013 BCORL1Q5H9F3 1711 aa12.63□□□□□ -0.39
PTCSC3-201ENST00000556013 CCDC18Q5T9S5 1454 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms