RNA–Protein interactions for RNA: ENST00000555578.1

LINC00638-201, long intergenic non-protein coding RNA 638, humanhuman

BASIC

Gene LINC00638, Length 2,518 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00638-201ENST00000555578 IFT140Q96RY7 1462 aa21.44■■□□□ 1.02
LINC00638-201ENST00000555578 PBRM1Q86U86 1689 aa21.41■■□□□ 1.02
LINC00638-201ENST00000555578 ATP1B4Q9UN42 357 aaPredicted RBP21.39■■□□□ 1.01
LINC00638-201ENST00000555578 FHOD3Q2V2M9 1422 aa21.38■■□□□ 1.01
LINC00638-201ENST00000555578 GRIN2BQ13224 1484 aa21.37■■□□□ 1.01
LINC00638-201ENST00000555578 CTTNBP2Q8WZ74 1663 aa21.36■■□□□ 1.01
LINC00638-201ENST00000555578 FHAD1B1AJZ9 1412 aa21.34■■□□□ 1.01
LINC00638-201ENST00000555578 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.33■■□□□ 1
LINC00638-201ENST00000555578 EIF4G3O43432 1585 aaKnown RBP21.31■■□□□ 1
LINC00638-201ENST00000555578 HNRNPUL2Q1KMD3 747 aaKnown RBP21.3■■□□□ 1
LINC00638-201ENST00000555578 ADAMTS12P58397 1594 aa21.3■■□□□ 1
LINC00638-201ENST00000555578 SNAPC4Q5SXM2 1469 aa21.29■■□□□ 1
LINC00638-201ENST00000555578 FBLN2P98095 1184 aa21.28■■□□□ 1
LINC00638-201ENST00000555578 PCF11O94913 1555 aaKnown RBP21.22■□□□□ 0.99
LINC00638-201ENST00000555578 EFCAB5A4FU69 1503 aa21.21■□□□□ 0.99
LINC00638-201ENST00000555578 CHMP7Q8WUX9 453 aaPredicted RBP21.21■□□□□ 0.99
LINC00638-201ENST00000555578 CCER1Q8TC90 406 aaPredicted RBP21.18■□□□□ 0.98
LINC00638-201ENST00000555578 TIAM1Q13009 1591 aa21.15■□□□□ 0.98
LINC00638-201ENST00000555578 GRIN2AQ12879 1464 aa21.15■□□□□ 0.98
LINC00638-201ENST00000555578 IQGAP2Q13576 1575 aa21.15■□□□□ 0.98
LINC00638-201ENST00000555578 SAMD9Q5K651 1589 aa21.15■□□□□ 0.98
LINC00638-201ENST00000555578 FMN1Q68DA7 1419 aa21.12■□□□□ 0.97
LINC00638-201ENST00000555578 CASKIN1Q8WXD9 1431 aa21.11■□□□□ 0.97
LINC00638-201ENST00000555578 MAGI1Q96QZ7 1491 aaPredicted RBP21.1■□□□□ 0.97
LINC00638-201ENST00000555578 ARID3CA6NKF2 412 aa21.1■□□□□ 0.97
LINC00638-201ENST00000555578 LRRC9Q6ZRR7 1453 aa21.1■□□□□ 0.97
LINC00638-201ENST00000555578 ITGAEP38570 1179 aa21.09■□□□□ 0.97
LINC00638-201ENST00000555578 FYCO1Q9BQS8 1478 aa21.08■□□□□ 0.97
LINC00638-201ENST00000555578 SYNJ2O15056 1496 aa21.08■□□□□ 0.96
LINC00638-201ENST00000555578 PELP1Q8IZL8 1130 aaKnown RBP21.07■□□□□ 0.96
LINC00638-201ENST00000555578 KIAA0586Q9BVV6 1533 aa21.06■□□□□ 0.96
LINC00638-201ENST00000555578 ZEB1P37275 1124 aaPredicted RBP21.05■□□□□ 0.96
LINC00638-201ENST00000555578 MAP3K1Q13233 1512 aa21.05■□□□□ 0.96
LINC00638-201ENST00000555578 CEP170Q5SW79 1584 aa21.03■□□□□ 0.96
LINC00638-201ENST00000555578 PHLDB1Q86UU1 1377 aa21.03■□□□□ 0.96
LINC00638-201ENST00000555578 CFAP43Q8NDM7 1665 aa21.01■□□□□ 0.95
LINC00638-201ENST00000555578 LRRIQ1Q96JM4 1722 aa21■□□□□ 0.95
LINC00638-201ENST00000555578 CCNB3Q8WWL7 1395 aa21■□□□□ 0.95
LINC00638-201ENST00000555578 RRBP1Q9P2E9 1410 aaKnown RBP21■□□□□ 0.95
LINC00638-201ENST00000555578 UGGT2Q9NYU1 1516 aa20.99■□□□□ 0.95
LINC00638-201ENST00000555578 DISP1Q96F81 1524 aa20.98■□□□□ 0.95
LINC00638-201ENST00000555578 JPH4Q96JJ6 628 aa20.97■□□□□ 0.95
LINC00638-201ENST00000555578 FAM50AQ14320 339 aaKnown RBP20.96■□□□□ 0.95
LINC00638-201ENST00000555578 MTUS2Q5JR59 1369 aa20.96■□□□□ 0.95
LINC00638-201ENST00000555578 NUP160Q12769 1436 aa20.93■□□□□ 0.94
LINC00638-201ENST00000555578 KIAA0556O60303 1618 aa20.92■□□□□ 0.94
LINC00638-201ENST00000555578 CDK13Q14004 1512 aaKnown RBP20.89■□□□□ 0.93
LINC00638-201ENST00000555578 MAGI3Q5TCQ9 1506 aa20.86■□□□□ 0.93
LINC00638-201ENST00000555578 EPRSP07814 1512 aaKnown RBP20.86■□□□□ 0.93
LINC00638-201ENST00000555578 CHD1O14646 1710 aa20.83■□□□□ 0.93
LINC00638-201ENST00000555578 HECW1Q76N89 1606 aa20.83■□□□□ 0.93
LINC00638-201ENST00000555578 PLB1Q6P1J6 1458 aa20.82■□□□□ 0.92
LINC00638-201ENST00000555578 NCOA2Q15596 1464 aa20.81■□□□□ 0.92
LINC00638-201ENST00000555578 CARMIL2Q6F5E8 1435 aa20.79■□□□□ 0.92
LINC00638-201ENST00000555578 CCDC18Q5T9S5 1454 aa20.79■□□□□ 0.92
LINC00638-201ENST00000555578 NUP153P49790 1475 aaKnown RBP20.78■□□□□ 0.92
LINC00638-201ENST00000555578 FGD6Q6ZV73 1430 aa20.76■□□□□ 0.91
LINC00638-201ENST00000555578 PRG4Q92954 1404 aaPredicted RBP20.76■□□□□ 0.91
LINC00638-201ENST00000555578 RAPGEF6Q8TEU7 1601 aa20.75■□□□□ 0.91
LINC00638-201ENST00000555578 EHBP1L1Q8N3D4 1523 aa20.75■□□□□ 0.91
LINC00638-201ENST00000555578 SUPT6HQ7KZ85 1726 aaKnown RBP20.74■□□□□ 0.91
LINC00638-201ENST00000555578 MYOM3Q5VTT5 1437 aa20.71■□□□□ 0.91
LINC00638-201ENST00000555578 RAB3GAP2Q9H2M9 1393 aa20.71■□□□□ 0.91
LINC00638-201ENST00000555578 DHX57Q6P158 1386 aaKnown RBP20.7■□□□□ 0.9
LINC00638-201ENST00000555578 SCAF1Q9H7N4 1312 aaKnown RBP20.68■□□□□ 0.9
LINC00638-201ENST00000555578 PTPRKQ15262 1439 aa20.66■□□□□ 0.9
LINC00638-201ENST00000555578 ARHGEF11O15085 1522 aa20.65■□□□□ 0.9
LINC00638-201ENST00000555578 PTPRGP23470 1445 aa20.65■□□□□ 0.9
LINC00638-201ENST00000555578 ERCC6L2Q5T890 1561 aa20.65■□□□□ 0.9
LINC00638-201ENST00000555578 CDK11AQ9UQ88 783 aaPredicted RBP20.64■□□□□ 0.9
LINC00638-201ENST00000555578 SETD5Q9C0A6 1442 aa20.64■□□□□ 0.89
LINC00638-201ENST00000555578 CHIC2Q9UKJ5 165 aa20.63■□□□□ 0.89
LINC00638-201ENST00000555578 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.61■□□□□ 0.89
LINC00638-201ENST00000555578 PTPN23Q9H3S7 1636 aa20.61■□□□□ 0.89
LINC00638-201ENST00000555578 ZNF644Q9H582 1327 aaPredicted RBP20.6■□□□□ 0.89
LINC00638-201ENST00000555578 ABCA8O94911 1581 aa20.59■□□□□ 0.89
LINC00638-201ENST00000555578 ATP10BO94823 1461 aa20.58■□□□□ 0.88
LINC00638-201ENST00000555578 TROQ12816 1431 aaPredicted RBP20.56■□□□□ 0.88
LINC00638-201ENST00000555578 RRP7BPQ9NSQ0 103 aa20.56■□□□□ 0.88
LINC00638-201ENST00000555578 PLEKHD1A6NEE1 506 aa20.55■□□□□ 0.88
LINC00638-201ENST00000555578 SHROOM2Q13796 1616 aa20.54■□□□□ 0.88
LINC00638-201ENST00000555578 ZNF777Q9ULD5 760 aaPredicted RBP20.53■□□□□ 0.88
LINC00638-201ENST00000555578 KIF14Q15058 1648 aa20.53■□□□□ 0.88
LINC00638-201ENST00000555578 CLASP1Q7Z460 1538 aa20.5■□□□□ 0.87
LINC00638-201ENST00000555578 CFDP1Q9UEE9 299 aaPredicted RBP20.5■□□□□ 0.87
LINC00638-201ENST00000555578 MIA2Q96PC5 1412 aa20.49■□□□□ 0.87
LINC00638-201ENST00000555578 TCOF1Q13428 1488 aaKnown RBP20.49■□□□□ 0.87
LINC00638-201ENST00000555578 UACAQ9BZF9 1416 aa20.48■□□□□ 0.87
LINC00638-201ENST00000555578 CLSPNQ9HAW4 1339 aa20.46■□□□□ 0.87
LINC00638-201ENST00000555578 NAIPQ13075 1403 aa20.46■□□□□ 0.87
LINC00638-201ENST00000555578 SIN3AQ96ST3 1273 aa20.45■□□□□ 0.86
LINC00638-201ENST00000555578 HFM1A2PYH4 1435 aa20.45■□□□□ 0.86
LINC00638-201ENST00000555578 MAPKBP1O60336 1514 aa20.45■□□□□ 0.86
LINC00638-201ENST00000555578 GPATCH8Q9UKJ3 1502 aaKnown RBP20.45■□□□□ 0.86
LINC00638-201ENST00000555578 NEUROD1Q13562 356 aa20.43■□□□□ 0.86
LINC00638-201ENST00000555578 KCNH8Q96L42 1107 aa20.41■□□□□ 0.86
LINC00638-201ENST00000555578 ABCC5O15440 1437 aa20.39■□□□□ 0.85
LINC00638-201ENST00000555578 DAPK1P53355 1430 aa20.39■□□□□ 0.85
LINC00638-201ENST00000555578 ADCY10Q96PN6 1610 aa20.38■□□□□ 0.85
LINC00638-201ENST00000555578 CAMSAP2Q08AD1 1489 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms