RNA–Protein interactions for RNA: ENST00000555572.1

NME1-NME2-203, Transcript of NME1-NME2 readthrough, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NME1-NME2, Length 1,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-NME2-203ENST00000555572 AEBP2Q6ZN18 517 aaPredicted RBP23.79■■□□□ 1.4
NME1-NME2-203ENST00000555572 IGF1RP08069 1367 aa23.78■■□□□ 1.4
NME1-NME2-203ENST00000555572 EEA1Q15075 1411 aa23.78■■□□□ 1.4
NME1-NME2-203ENST00000555572 RUSC2Q8N2Y8 1516 aa23.77■■□□□ 1.4
NME1-NME2-203ENST00000555572 KIF13AQ9H1H9 1805 aa23.73■■□□□ 1.39
NME1-NME2-203ENST00000555572 KIAA0586Q9BVV6 1533 aa23.71■■□□□ 1.39
NME1-NME2-203ENST00000555572 CUL7Q14999 1698 aa23.7■■□□□ 1.39
NME1-NME2-203ENST00000555572 ABCC10Q5T3U5 1492 aa23.67■■□□□ 1.38
NME1-NME2-203ENST00000555572 NPM1P06748 294 aaKnown RBP eCLIP23.66■■□□□ 1.38
NME1-NME2-203ENST00000555572 MAPKBP1O60336 1514 aa23.64■■□□□ 1.38
NME1-NME2-203ENST00000555572 FAM69CQ0P6D2 419 aa23.64■■□□□ 1.37
NME1-NME2-203ENST00000555572 ADCY10Q96PN6 1610 aa23.62■■□□□ 1.37
NME1-NME2-203ENST00000555572 CSRNP3Q8WYN3 585 aa23.59■■□□□ 1.37
NME1-NME2-203ENST00000555572 CARMIL1Q5VZK9 1371 aa23.57■■□□□ 1.36
NME1-NME2-203ENST00000555572 DIP2BQ9P265 1576 aa23.55■■□□□ 1.36
NME1-NME2-203ENST00000555572 FAM9AQ8IZU1 332 aaPredicted RBP23.54■■□□□ 1.36
NME1-NME2-203ENST00000555572 PRXQ9BXM0 1461 aa23.53■■□□□ 1.36
NME1-NME2-203ENST00000555572 PTPRGP23470 1445 aa23.52■■□□□ 1.36
NME1-NME2-203ENST00000555572 RAPGEF2Q9Y4G8 1499 aa23.51■■□□□ 1.35
NME1-NME2-203ENST00000555572 KIF21BO75037 1637 aa23.48■■□□□ 1.35
NME1-NME2-203ENST00000555572 TNIKQ9UKE5 1360 aa23.46■■□□□ 1.35
NME1-NME2-203ENST00000555572 CARMIL2Q6F5E8 1435 aa23.44■■□□□ 1.34
NME1-NME2-203ENST00000555572 ABCC2Q92887 1545 aa23.4■■□□□ 1.34
NME1-NME2-203ENST00000555572 IQGAP2Q13576 1575 aa23.39■■□□□ 1.33
NME1-NME2-203ENST00000555572 UHRF1BP1LA0JNW5 1464 aa23.37■■□□□ 1.33
NME1-NME2-203ENST00000555572 DISP1Q96F81 1524 aa23.36■■□□□ 1.33
NME1-NME2-203ENST00000555572 GOLGA3Q08378 1498 aa23.36■■□□□ 1.33
NME1-NME2-203ENST00000555572 TTBK1Q5TCY1 1321 aaPredicted RBP23.35■■□□□ 1.33
NME1-NME2-203ENST00000555572 KDM6BO15054 1643 aa23.35■■□□□ 1.33
NME1-NME2-203ENST00000555572 TSPOAP1O95153 1857 aa23.34■■□□□ 1.33
NME1-NME2-203ENST00000555572 ASXL2Q76L83 1435 aa23.33■■□□□ 1.33
NME1-NME2-203ENST00000555572 UACAQ9BZF9 1416 aa23.33■■□□□ 1.33
NME1-NME2-203ENST00000555572 PLB1Q6P1J6 1458 aa23.33■■□□□ 1.33
NME1-NME2-203ENST00000555572 CTTNBP2Q8WZ74 1663 aa23.32■■□□□ 1.32
NME1-NME2-203ENST00000555572 KDM4FA0A1W2PPD8 638 aa23.32■■□□□ 1.32
NME1-NME2-203ENST00000555572 GLI2P10070 1586 aa23.31■■□□□ 1.32
NME1-NME2-203ENST00000555572 UGGT2Q9NYU1 1516 aa23.3■■□□□ 1.32
NME1-NME2-203ENST00000555572 KDM5BQ9UGL1 1544 aa23.27■■□□□ 1.32
NME1-NME2-203ENST00000555572 PPRC1Q5VV67 1664 aaKnown RBP23.23■■□□□ 1.31
NME1-NME2-203ENST00000555572 EPRSP07814 1512 aaKnown RBP23.2■■□□□ 1.3
NME1-NME2-203ENST00000555572 UBTFP17480 764 aaKnown RBP23.19■■□□□ 1.3
NME1-NME2-203ENST00000555572 KIAA0556O60303 1618 aa23.18■■□□□ 1.3
NME1-NME2-203ENST00000555572 COL17A1Q9UMD9 1497 aaPredicted RBP23.17■■□□□ 1.3
NME1-NME2-203ENST00000555572 EHMT2Q96KQ7 1210 aa23.14■■□□□ 1.29
NME1-NME2-203ENST00000555572 ZCCHC11Q5TAX3 1644 aaKnown RBP23.13■■□□□ 1.29
NME1-NME2-203ENST00000555572 MAP3K4Q9Y6R4 1608 aa23.13■■□□□ 1.29
NME1-NME2-203ENST00000555572 TEX14Q8IWB6 1497 aa23.08■■□□□ 1.29
NME1-NME2-203ENST00000555572 WDR7Q9Y4E6 1490 aa23.06■■□□□ 1.28
NME1-NME2-203ENST00000555572 LOC105371045A0A1W2PR82 267 aa23.04■■□□□ 1.28
NME1-NME2-203ENST00000555572 ABCA8O94911 1581 aa23.03■■□□□ 1.28
NME1-NME2-203ENST00000555572 EFCAB5A4FU69 1503 aa23.02■■□□□ 1.28
NME1-NME2-203ENST00000555572 SAMD9Q5K651 1589 aa23.01■■□□□ 1.27
NME1-NME2-203ENST00000555572 ADGRL1O94910 1474 aa23■■□□□ 1.27
NME1-NME2-203ENST00000555572 MAGI3Q5TCQ9 1506 aa22.98■■□□□ 1.27
NME1-NME2-203ENST00000555572 CD109Q6YHK3 1445 aa22.97■■□□□ 1.27
NME1-NME2-203ENST00000555572 KCNH8Q96L42 1107 aa22.95■■□□□ 1.26
NME1-NME2-203ENST00000555572 CLIP1P30622 1438 aa22.92■■□□□ 1.26
NME1-NME2-203ENST00000555572 CEP162Q5TB80 1403 aa22.91■■□□□ 1.26
NME1-NME2-203ENST00000555572 CFAP43Q8NDM7 1665 aa22.91■■□□□ 1.26
NME1-NME2-203ENST00000555572 ARHGAP35Q9NRY4 1499 aa22.91■■□□□ 1.26
NME1-NME2-203ENST00000555572 RANGAP1P46060 587 aaPredicted RBP22.9■■□□□ 1.26
NME1-NME2-203ENST00000555572 ATP10BO94823 1461 aa22.87■■□□□ 1.25
NME1-NME2-203ENST00000555572 P3H3Q8IVL6 736 aa22.84■■□□□ 1.25
NME1-NME2-203ENST00000555572 FHOD3Q2V2M9 1422 aa22.82■■□□□ 1.24
NME1-NME2-203ENST00000555572 ARAP3Q8WWN8 1544 aa22.81■■□□□ 1.24
NME1-NME2-203ENST00000555572 ARID3CA6NKF2 412 aa22.78■■□□□ 1.24
NME1-NME2-203ENST00000555572 FMN1Q68DA7 1419 aa22.78■■□□□ 1.24
NME1-NME2-203ENST00000555572 PHLDB1Q86UU1 1377 aa22.76■■□□□ 1.23
NME1-NME2-203ENST00000555572 ILDR1Q86SU0 546 aaPredicted RBP22.74■■□□□ 1.23
NME1-NME2-203ENST00000555572 ABCA9Q8IUA7 1624 aa22.73■■□□□ 1.23
NME1-NME2-203ENST00000555572 HECW2Q9P2P5 1572 aa22.72■■□□□ 1.23
NME1-NME2-203ENST00000555572 RAPGEF6Q8TEU7 1601 aa22.71■■□□□ 1.23
NME1-NME2-203ENST00000555572 NUP153P49790 1475 aaKnown RBP22.66■■□□□ 1.22
NME1-NME2-203ENST00000555572 NEO1Q92859 1461 aa22.66■■□□□ 1.22
NME1-NME2-203ENST00000555572 RAPGEF3O95398 923 aa22.65■■□□□ 1.22
NME1-NME2-203ENST00000555572 HECW1Q76N89 1606 aa22.64■■□□□ 1.22
NME1-NME2-203ENST00000555572 VPS8Q8N3P4 1428 aa22.64■■□□□ 1.21
NME1-NME2-203ENST00000555572 FYCO1Q9BQS8 1478 aa22.63■■□□□ 1.21
NME1-NME2-203ENST00000555572 CASKIN1Q8WXD9 1431 aa22.63■■□□□ 1.21
NME1-NME2-203ENST00000555572 PCF11O94913 1555 aaKnown RBP22.63■■□□□ 1.21
NME1-NME2-203ENST00000555572 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.62■■□□□ 1.21
NME1-NME2-203ENST00000555572 HNRNPUL2Q1KMD3 747 aaKnown RBP22.62■■□□□ 1.21
NME1-NME2-203ENST00000555572 PLEKHD1A6NEE1 506 aa22.58■■□□□ 1.21
NME1-NME2-203ENST00000555572 ADAMTSL3P82987 1691 aa22.57■■□□□ 1.2
NME1-NME2-203ENST00000555572 FRMPD1Q5SYB0 1578 aa22.55■■□□□ 1.2
NME1-NME2-203ENST00000555572 PTPRMP28827 1452 aa22.54■■□□□ 1.2
NME1-NME2-203ENST00000555572 CCDC18Q5T9S5 1454 aa22.54■■□□□ 1.2
NME1-NME2-203ENST00000555572 ATP1B4Q9UN42 357 aaPredicted RBP22.5■■□□□ 1.19
NME1-NME2-203ENST00000555572 LRRIQ1Q96JM4 1722 aa22.5■■□□□ 1.19
NME1-NME2-203ENST00000555572 AKNAQ7Z591 1439 aa22.49■■□□□ 1.19
NME1-NME2-203ENST00000555572 DENND4BO75064 1496 aaPredicted RBP22.48■■□□□ 1.19
NME1-NME2-203ENST00000555572 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.47■■□□□ 1.194e-7■■■□□ 16.9
NME1-NME2-203ENST00000555572 BCORL1Q5H9F3 1711 aa22.47■■□□□ 1.19
NME1-NME2-203ENST00000555572 FANCAO15360 1455 aa22.46■■□□□ 1.19
NME1-NME2-203ENST00000555572 CDK13Q14004 1512 aaKnown RBP22.46■■□□□ 1.19
NME1-NME2-203ENST00000555572 ARID4BQ4LE39 1312 aaPredicted RBP22.44■■□□□ 1.18
NME1-NME2-203ENST00000555572 RICTORQ6R327 1708 aa22.44■■□□□ 1.18
NME1-NME2-203ENST00000555572 MAP3K1Q13233 1512 aa22.43■■□□□ 1.18
NME1-NME2-203ENST00000555572 ARHGEF40Q8TER5 1519 aa22.42■■□□□ 1.18
NME1-NME2-203ENST00000555572 CDK11AQ9UQ88 783 aaPredicted RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms