RNA–Protein interactions for RNA: ENST00000555451.1

XRCC3-213, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 409 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-213ENST00000555451 RIMBP3Q9UFD9 1639 aa17.86■□□□□ 0.45
XRCC3-213ENST00000555451 FHAD1B1AJZ9 1412 aa17.85■□□□□ 0.45
XRCC3-213ENST00000555451 ADAMTS12P58397 1594 aa17.85■□□□□ 0.45
XRCC3-213ENST00000555451 CEP162Q5TB80 1403 aa17.82■□□□□ 0.44
XRCC3-213ENST00000555451 GRIN2AQ12879 1464 aa17.81■□□□□ 0.44
XRCC3-213ENST00000555451 CLASP1Q7Z460 1538 aa17.8■□□□□ 0.44
XRCC3-213ENST00000555451 ARHGEF11O15085 1522 aa17.76■□□□□ 0.43
XRCC3-213ENST00000555451 NUP160Q12769 1436 aa17.75■□□□□ 0.43
XRCC3-213ENST00000555451 CTTNBP2Q8WZ74 1663 aa17.74■□□□□ 0.43
XRCC3-213ENST00000555451 CLIP1P30622 1438 aa17.72■□□□□ 0.43
XRCC3-213ENST00000555451 CEP170Q5SW79 1584 aa17.71■□□□□ 0.43
XRCC3-213ENST00000555451 ARAP1Q96P48 1450 aa17.61■□□□□ 0.41
XRCC3-213ENST00000555451 EFCAB5A4FU69 1503 aa17.6■□□□□ 0.41
XRCC3-213ENST00000555451 SHROOM2Q13796 1616 aa17.6■□□□□ 0.41
XRCC3-213ENST00000555451 ARHGAP35Q9NRY4 1499 aa17.59■□□□□ 0.41
XRCC3-213ENST00000555451 CYB5RLQ6IPT4 315 aa17.59■□□□□ 0.41
XRCC3-213ENST00000555451 KIAA0586Q9BVV6 1533 aa17.58■□□□□ 0.41
XRCC3-213ENST00000555451 JPH4Q96JJ6 628 aa17.58■□□□□ 0.4
XRCC3-213ENST00000555451 IQGAP2Q13576 1575 aa17.57■□□□□ 0.4
XRCC3-213ENST00000555451 VPS8Q8N3P4 1428 aa17.57■□□□□ 0.4
XRCC3-213ENST00000555451 RANGAP1P46060 587 aaPredicted RBP17.56■□□□□ 0.4
XRCC3-213ENST00000555451 ERCC6L2Q5T890 1561 aa17.53■□□□□ 0.4
XRCC3-213ENST00000555451 SAMD9Q5K651 1589 aa17.53■□□□□ 0.4
XRCC3-213ENST00000555451 PRG4Q92954 1404 aaPredicted RBP17.52■□□□□ 0.4
XRCC3-213ENST00000555451 UGGT2Q9NYU1 1516 aa17.5■□□□□ 0.39
XRCC3-213ENST00000555451 FHOD3Q2V2M9 1422 aa17.43■□□□□ 0.38
XRCC3-213ENST00000555451 FMN1Q68DA7 1419 aa17.41■□□□□ 0.38
XRCC3-213ENST00000555451 KIAA0556O60303 1618 aa17.4■□□□□ 0.38
XRCC3-213ENST00000555451 P3H3Q8IVL6 736 aa17.38■□□□□ 0.37
XRCC3-213ENST00000555451 CARMIL2Q6F5E8 1435 aa17.38■□□□□ 0.37
XRCC3-213ENST00000555451 DISP1Q96F81 1524 aa17.37■□□□□ 0.37
XRCC3-213ENST00000555451 APLP2Q06481 763 aa17.37■□□□□ 0.37
XRCC3-213ENST00000555451 PCF11O94913 1555 aaKnown RBP17.36■□□□□ 0.37
XRCC3-213ENST00000555451 FYCO1Q9BQS8 1478 aa17.36■□□□□ 0.37
XRCC3-213ENST00000555451 MAP3K1Q13233 1512 aa17.34■□□□□ 0.37
XRCC3-213ENST00000555451 CASKIN1Q8WXD9 1431 aa17.34■□□□□ 0.37
XRCC3-213ENST00000555451 PTPRGP23470 1445 aa17.31■□□□□ 0.36
XRCC3-213ENST00000555451 CFAP43Q8NDM7 1665 aa17.29■□□□□ 0.36
XRCC3-213ENST00000555451 TIAM1Q13009 1591 aa17.28■□□□□ 0.36
XRCC3-213ENST00000555451 TRHP20396 242 aaPredicted RBP17.28■□□□□ 0.36
XRCC3-213ENST00000555451 TRIM26Q12899 539 aaPredicted RBP17.27■□□□□ 0.36
XRCC3-213ENST00000555451 HECW1Q76N89 1606 aa17.27■□□□□ 0.36
XRCC3-213ENST00000555451 ADCY10Q96PN6 1610 aa17.24■□□□□ 0.35
XRCC3-213ENST00000555451 PPARGC1BQ86YN6 1023 aaKnown RBP17.23■□□□□ 0.35
XRCC3-213ENST00000555451 CCDC18Q5T9S5 1454 aa17.22■□□□□ 0.35
XRCC3-213ENST00000555451 TTBK1Q5TCY1 1321 aaPredicted RBP17.21■□□□□ 0.35
XRCC3-213ENST00000555451 RAPGEF6Q8TEU7 1601 aa17.21■□□□□ 0.35
XRCC3-213ENST00000555451 UHRF1BP1LA0JNW5 1464 aa17.2■□□□□ 0.34
XRCC3-213ENST00000555451 NPM1P06748 294 aaKnown RBP eCLIP17.2■□□□□ 0.34
XRCC3-213ENST00000555451 LRRIQ1Q96JM4 1722 aa17.2■□□□□ 0.34
XRCC3-213ENST00000555451 UACAQ9BZF9 1416 aa17.2■□□□□ 0.34
XRCC3-213ENST00000555451 ATP1B4Q9UN42 357 aaPredicted RBP17.19■□□□□ 0.34
XRCC3-213ENST00000555451 LRRC9Q6ZRR7 1453 aa17.18■□□□□ 0.34
XRCC3-213ENST00000555451 KANK4Q5T7N3 995 aaPredicted RBP17.16■□□□□ 0.34
XRCC3-213ENST00000555451 MAPKBP1O60336 1514 aa17.16■□□□□ 0.34
XRCC3-213ENST00000555451 EPRSP07814 1512 aaKnown RBP17.16■□□□□ 0.34
XRCC3-213ENST00000555451 ABCC2Q92887 1545 aa17.16■□□□□ 0.34
XRCC3-213ENST00000555451 ABCA8O94911 1581 aa17.15■□□□□ 0.34
XRCC3-213ENST00000555451 PCGF6Q9BYE7 350 aa17.15■□□□□ 0.34
XRCC3-213ENST00000555451 NUP153P49790 1475 aaKnown RBP17.13■□□□□ 0.33
XRCC3-213ENST00000555451 PLB1Q6P1J6 1458 aa17.12■□□□□ 0.33
XRCC3-213ENST00000555451 EHBP1L1Q8N3D4 1523 aa17.12■□□□□ 0.33
XRCC3-213ENST00000555451 KDM5BQ9UGL1 1544 aa17.11■□□□□ 0.33
XRCC3-213ENST00000555451 MTUS2Q5JR59 1369 aa17.09■□□□□ 0.33
XRCC3-213ENST00000555451 CDK13Q14004 1512 aaKnown RBP17.09■□□□□ 0.33
XRCC3-213ENST00000555451 ABCC10Q5T3U5 1492 aa17.08■□□□□ 0.32
XRCC3-213ENST00000555451 SUPT6HQ7KZ85 1726 aaKnown RBP17.06■□□□□ 0.32
XRCC3-213ENST00000555451 ASXL2Q76L83 1435 aa17.04■□□□□ 0.32
XRCC3-213ENST00000555451 MAGI3Q5TCQ9 1506 aa17.04■□□□□ 0.32
XRCC3-213ENST00000555451 ZCCHC11Q5TAX3 1644 aaKnown RBP17.03■□□□□ 0.32
XRCC3-213ENST00000555451 KIF13AQ9H1H9 1805 aa17.03■□□□□ 0.32
XRCC3-213ENST00000555451 FAM69CQ0P6D2 419 aa17.03■□□□□ 0.32
XRCC3-213ENST00000555451 RRBP1Q9P2E9 1410 aaKnown RBP17.03■□□□□ 0.32
XRCC3-213ENST00000555451 DIP2BQ9P265 1576 aa17.02■□□□□ 0.32
XRCC3-213ENST00000555451 CDK11AQ9UQ88 783 aaPredicted RBP17.02■□□□□ 0.32
XRCC3-213ENST00000555451 ATP10BO94823 1461 aa16.99■□□□□ 0.31
XRCC3-213ENST00000555451 NCOA2Q15596 1464 aa16.99■□□□□ 0.31
XRCC3-213ENST00000555451 AEBP2Q6ZN18 517 aaPredicted RBP16.99■□□□□ 0.31
XRCC3-213ENST00000555451 PHLDB1Q86UU1 1377 aa16.98■□□□□ 0.31
XRCC3-213ENST00000555451 TROQ12816 1431 aaPredicted RBP16.97■□□□□ 0.31
XRCC3-213ENST00000555451 ARID3CA6NKF2 412 aa16.97■□□□□ 0.31
XRCC3-213ENST00000555451 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.97■□□□□ 0.31
XRCC3-213ENST00000555451 HNRNPUL2Q1KMD3 747 aaKnown RBP16.97■□□□□ 0.31
XRCC3-213ENST00000555451 GLI2P10070 1586 aa16.97■□□□□ 0.31
XRCC3-213ENST00000555451 CCNB3Q8WWL7 1395 aa16.96■□□□□ 0.31
XRCC3-213ENST00000555451 WDR7Q9Y4E6 1490 aa16.96■□□□□ 0.31
XRCC3-213ENST00000555451 MYOM3Q5VTT5 1437 aa16.94■□□□□ 0.3
XRCC3-213ENST00000555451 PLEKHD1A6NEE1 506 aa16.91■□□□□ 0.3
XRCC3-213ENST00000555451 KIF14Q15058 1648 aa16.91■□□□□ 0.3
XRCC3-213ENST00000555451 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.9■□□□□ 0.3
XRCC3-213ENST00000555451 FGD6Q6ZV73 1430 aa16.9■□□□□ 0.3
XRCC3-213ENST00000555451 ITSN2Q9NZM3 1697 aa16.88■□□□□ 0.29
XRCC3-213ENST00000555451 MIA2Q96PC5 1412 aa16.87■□□□□ 0.29
XRCC3-213ENST00000555451 MAP3K4Q9Y6R4 1608 aa16.86■□□□□ 0.29
XRCC3-213ENST00000555451 KCNH8Q96L42 1107 aa16.86■□□□□ 0.29
XRCC3-213ENST00000555451 PTPN23Q9H3S7 1636 aa16.85■□□□□ 0.29
XRCC3-213ENST00000555451 TCOF1Q13428 1488 aaKnown RBP16.84■□□□□ 0.29
XRCC3-213ENST00000555451 TSPOAP1O95153 1857 aa16.83■□□□□ 0.28
XRCC3-213ENST00000555451 PPRC1Q5VV67 1664 aaKnown RBP16.83■□□□□ 0.28
XRCC3-213ENST00000555451 CD109Q6YHK3 1445 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms