RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 NUP160Q12769 1436 aa28.72■■■□□ 2.19
PSEN1-212ENST00000555254 CEP170Q5SW79 1584 aa28.7■■■□□ 2.18
PSEN1-212ENST00000555254 CUL7Q14999 1698 aa28.67■■■□□ 2.18
PSEN1-212ENST00000555254 CSRNP3Q8WYN3 585 aa28.65■■■□□ 2.18
PSEN1-212ENST00000555254 JPH4Q96JJ6 628 aa28.57■■■□□ 2.16
PSEN1-212ENST00000555254 LOC105371045A0A1W2PR82 267 aa28.56■■■□□ 2.16
PSEN1-212ENST00000555254 RAPGEF2Q9Y4G8 1499 aa28.54■■■□□ 2.16
PSEN1-212ENST00000555254 KIAA0586Q9BVV6 1533 aa28.48■■■□□ 2.15
PSEN1-212ENST00000555254 PRG4Q92954 1404 aaPredicted RBP28.48■■■□□ 2.15
PSEN1-212ENST00000555254 ERCC6L2Q5T890 1561 aa28.45■■■□□ 2.15
PSEN1-212ENST00000555254 EHMT2Q96KQ7 1210 aa28.43■■■□□ 2.14
PSEN1-212ENST00000555254 SHROOM2Q13796 1616 aa28.42■■■□□ 2.14
PSEN1-212ENST00000555254 PRXQ9BXM0 1461 aa28.41■■■□□ 2.14
PSEN1-212ENST00000555254 ILDR1Q86SU0 546 aaPredicted RBP28.4■■■□□ 2.14
PSEN1-212ENST00000555254 TTBK1Q5TCY1 1321 aaPredicted RBP28.3■■■□□ 2.12
PSEN1-212ENST00000555254 UBTFP17480 764 aaKnown RBP28.3■■■□□ 2.12
PSEN1-212ENST00000555254 IQGAP2Q13576 1575 aa28.29■■■□□ 2.12
PSEN1-212ENST00000555254 GOLGA3Q08378 1498 aa28.29■■■□□ 2.12
PSEN1-212ENST00000555254 KIF21BO75037 1637 aa28.25■■■□□ 2.11
PSEN1-212ENST00000555254 CARMIL2Q6F5E8 1435 aa28.24■■■□□ 2.11
PSEN1-212ENST00000555254 TNIKQ9UKE5 1360 aa28.17■■■□□ 2.1
PSEN1-212ENST00000555254 PTPRGP23470 1445 aa28.16■■■□□ 2.1
PSEN1-212ENST00000555254 RANGAP1P46060 587 aaPredicted RBP28.14■■■□□ 2.1
PSEN1-212ENST00000555254 UGGT2Q9NYU1 1516 aa28.13■■■□□ 2.09
PSEN1-212ENST00000555254 DISP1Q96F81 1524 aa28.12■■■□□ 2.09
PSEN1-212ENST00000555254 CTTNBP2Q8WZ74 1663 aa28.11■■■□□ 2.09
PSEN1-212ENST00000555254 P3H3Q8IVL6 736 aa28.07■■■□□ 2.08
PSEN1-212ENST00000555254 NPM1P06748 294 aaKnown RBP eCLIP28.06■■■□□ 2.08
PSEN1-212ENST00000555254 KIAA0556O60303 1618 aa28.01■■■□□ 2.07
PSEN1-212ENST00000555254 KIF13AQ9H1H9 1805 aa27.98■■■□□ 2.07
PSEN1-212ENST00000555254 CEP162Q5TB80 1403 aa27.93■■■□□ 2.06
PSEN1-212ENST00000555254 ADCY10Q96PN6 1610 aa27.92■■■□□ 2.06
PSEN1-212ENST00000555254 UACAQ9BZF9 1416 aa27.92■■■□□ 2.06
PSEN1-212ENST00000555254 KDM4FA0A1W2PPD8 638 aa27.88■■■□□ 2.05
PSEN1-212ENST00000555254 CLIP1P30622 1438 aa27.84■■■□□ 2.05
PSEN1-212ENST00000555254 UHRF1BP1LA0JNW5 1464 aa27.83■■■□□ 2.04
PSEN1-212ENST00000555254 PLB1Q6P1J6 1458 aa27.83■■■□□ 2.04
PSEN1-212ENST00000555254 ABCC2Q92887 1545 aa27.81■■■□□ 2.04
PSEN1-212ENST00000555254 SAMD9Q5K651 1589 aa27.81■■■□□ 2.04
PSEN1-212ENST00000555254 FHOD3Q2V2M9 1422 aa27.79■■■□□ 2.04
PSEN1-212ENST00000555254 ARID3CA6NKF2 412 aa27.77■■■□□ 2.04
PSEN1-212ENST00000555254 FAM69CQ0P6D2 419 aa27.74■■■□□ 2.03
PSEN1-212ENST00000555254 EFCAB5A4FU69 1503 aa27.72■■■□□ 2.03
PSEN1-212ENST00000555254 MAPKBP1O60336 1514 aa27.72■■■□□ 2.03
PSEN1-212ENST00000555254 ABCA8O94911 1581 aa27.71■■■□□ 2.03
PSEN1-212ENST00000555254 KDM5BQ9UGL1 1544 aa27.69■■■□□ 2.02
PSEN1-212ENST00000555254 ASXL2Q76L83 1435 aa27.68■■■□□ 2.02
PSEN1-212ENST00000555254 ABCC10Q5T3U5 1492 aa27.65■■■□□ 2.02
PSEN1-212ENST00000555254 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.65■■■□□ 2.02
PSEN1-212ENST00000555254 HNRNPUL2Q1KMD3 747 aaKnown RBP27.65■■■□□ 2.02
PSEN1-212ENST00000555254 ARHGAP35Q9NRY4 1499 aa27.64■■■□□ 2.02
PSEN1-212ENST00000555254 ATP1B4Q9UN42 357 aaPredicted RBP27.63■■■□□ 2.01
PSEN1-212ENST00000555254 ZCCHC11Q5TAX3 1644 aaKnown RBP27.62■■■□□ 2.01
PSEN1-212ENST00000555254 KCNH8Q96L42 1107 aa27.58■■■□□ 2.01
PSEN1-212ENST00000555254 RAPGEF6Q8TEU7 1601 aa27.57■■■□□ 2
PSEN1-212ENST00000555254 ATP10BO94823 1461 aa27.57■■■□□ 2
PSEN1-212ENST00000555254 DIP2BQ9P265 1576 aa27.55■■■□□ 2
PSEN1-212ENST00000555254 FMN1Q68DA7 1419 aa27.53■■■□□ 2
PSEN1-212ENST00000555254 NUP153P49790 1475 aaKnown RBP27.52■■■□□ 2
PSEN1-212ENST00000555254 VPS8Q8N3P4 1428 aa27.52■■■□□ 2
PSEN1-212ENST00000555254 KDM6BO15054 1643 aa27.52■■■□□ 2
PSEN1-212ENST00000555254 WDR7Q9Y4E6 1490 aa27.51■■□□□ 1.99
PSEN1-212ENST00000555254 APLP2Q06481 763 aa27.49■■□□□ 1.99
PSEN1-212ENST00000555254 EPRSP07814 1512 aaKnown RBP27.49■■□□□ 1.99
PSEN1-212ENST00000555254 PLEKHD1A6NEE1 506 aa27.43■■□□□ 1.98
PSEN1-212ENST00000555254 TSPOAP1O95153 1857 aa27.42■■□□□ 1.98
PSEN1-212ENST00000555254 HECW2Q9P2P5 1572 aa27.41■■□□□ 1.98
PSEN1-212ENST00000555254 GLI2P10070 1586 aa27.4■■□□□ 1.98
PSEN1-212ENST00000555254 CDK13Q14004 1512 aaKnown RBP27.36■■□□□ 1.97
PSEN1-212ENST00000555254 HECW1Q76N89 1606 aa27.34■■□□□ 1.97
PSEN1-212ENST00000555254 CD109Q6YHK3 1445 aa27.32■■□□□ 1.96
PSEN1-212ENST00000555254 CASKIN1Q8WXD9 1431 aa27.32■■□□□ 1.96
PSEN1-212ENST00000555254 CDK11AQ9UQ88 783 aaPredicted RBP27.31■■□□□ 1.96
PSEN1-212ENST00000555254 ADGRL1O94910 1474 aa27.31■■□□□ 1.96
PSEN1-212ENST00000555254 PCF11O94913 1555 aaKnown RBP27.26■■□□□ 1.96
PSEN1-212ENST00000555254 MAP3K4Q9Y6R4 1608 aa27.26■■□□□ 1.95
PSEN1-212ENST00000555254 PPARGC1BQ86YN6 1023 aaKnown RBP27.25■■□□□ 1.95
PSEN1-212ENST00000555254 TEX14Q8IWB6 1497 aa27.22■■□□□ 1.95
PSEN1-212ENST00000555254 FYCO1Q9BQS8 1478 aa27.22■■□□□ 1.95
PSEN1-212ENST00000555254 FBXO41Q8TF61 875 aa27.19■■□□□ 1.94
PSEN1-212ENST00000555254 PPRC1Q5VV67 1664 aaKnown RBP27.19■■□□□ 1.94
PSEN1-212ENST00000555254 CFAP43Q8NDM7 1665 aa27.17■■□□□ 1.94
PSEN1-212ENST00000555254 CCDC18Q5T9S5 1454 aa27.17■■□□□ 1.94
PSEN1-212ENST00000555254 MAGI3Q5TCQ9 1506 aa27.16■■□□□ 1.94
PSEN1-212ENST00000555254 ABCA9Q8IUA7 1624 aa27.15■■□□□ 1.94
PSEN1-212ENST00000555254 TRIM26Q12899 539 aaPredicted RBP27.14■■□□□ 1.94
PSEN1-212ENST00000555254 TROQ12816 1431 aaPredicted RBP27.13■■□□□ 1.93
PSEN1-212ENST00000555254 LRRIQ1Q96JM4 1722 aa27.12■■□□□ 1.93
PSEN1-212ENST00000555254 MAP3K1Q13233 1512 aa27.1■■□□□ 1.93
PSEN1-212ENST00000555254 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.1■■□□□ 1.93
PSEN1-212ENST00000555254 COL17A1Q9UMD9 1497 aaPredicted RBP27.08■■□□□ 1.93
PSEN1-212ENST00000555254 TTC37Q6PGP7 1564 aa27.04■■□□□ 1.92
PSEN1-212ENST00000555254 KIF14Q15058 1648 aa27.01■■□□□ 1.92
PSEN1-212ENST00000555254 KANK4Q5T7N3 995 aaPredicted RBP27.01■■□□□ 1.91
PSEN1-212ENST00000555254 TIAM1Q13009 1591 aa27.01■■□□□ 1.91
PSEN1-212ENST00000555254 MTUS2Q5JR59 1369 aa27■■□□□ 1.91
PSEN1-212ENST00000555254 PHLDB1Q86UU1 1377 aa26.99■■□□□ 1.91
PSEN1-212ENST00000555254 PCGF6Q9BYE7 350 aa26.99■■□□□ 1.91
PSEN1-212ENST00000555254 PLCH2O75038 1416 aa26.99■■□□□ 1.91
PSEN1-212ENST00000555254 FANCAO15360 1455 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms