RNA–Protein interactions for RNA: ENST00000555243.1

PTPN21-207, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 5

Gene PTPN21, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-207ENST00000555243 RUSC2Q8N2Y8 1516 aa23.44■■□□□ 1.34
PTPN21-207ENST00000555243 CUL7Q14999 1698 aa23.43■■□□□ 1.34
PTPN21-207ENST00000555243 KIAA0586Q9BVV6 1533 aa23.41■■□□□ 1.34
PTPN21-207ENST00000555243 NPM1P06748 294 aaKnown RBP eCLIP23.4■■□□□ 1.34
PTPN21-207ENST00000555243 CARMIL1Q5VZK9 1371 aa23.38■■□□□ 1.33
PTPN21-207ENST00000555243 CARMIL2Q6F5E8 1435 aa23.25■■□□□ 1.31
PTPN21-207ENST00000555243 TTBK1Q5TCY1 1321 aaPredicted RBP23.23■■□□□ 1.31
PTPN21-207ENST00000555243 FAM69CQ0P6D2 419 aa23.22■■□□□ 1.31
PTPN21-207ENST00000555243 PTPRGP23470 1445 aa23.22■■□□□ 1.31
PTPN21-207ENST00000555243 AEBP2Q6ZN18 517 aaPredicted RBP23.2■■□□□ 1.3
PTPN21-207ENST00000555243 TNIKQ9UKE5 1360 aa23.18■■□□□ 1.3
PTPN21-207ENST00000555243 MAPKBP1O60336 1514 aa23.18■■□□□ 1.3
PTPN21-207ENST00000555243 ADCY10Q96PN6 1610 aa23.17■■□□□ 1.3
PTPN21-207ENST00000555243 IQGAP2Q13576 1575 aa23.17■■□□□ 1.3
PTPN21-207ENST00000555243 ABCC10Q5T3U5 1492 aa23.17■■□□□ 1.3
PTPN21-207ENST00000555243 RAPGEF2Q9Y4G8 1499 aa23.17■■□□□ 1.3
PTPN21-207ENST00000555243 KIF13AQ9H1H9 1805 aa23.14■■□□□ 1.29
PTPN21-207ENST00000555243 DIP2BQ9P265 1576 aa23.06■■□□□ 1.28
PTPN21-207ENST00000555243 ABCC2Q92887 1545 aa23.03■■□□□ 1.28
PTPN21-207ENST00000555243 UACAQ9BZF9 1416 aa23.02■■□□□ 1.28
PTPN21-207ENST00000555243 DISP1Q96F81 1524 aa23.02■■□□□ 1.28
PTPN21-207ENST00000555243 UGGT2Q9NYU1 1516 aa23.01■■□□□ 1.27
PTPN21-207ENST00000555243 UHRF1BP1LA0JNW5 1464 aa22.99■■□□□ 1.27
PTPN21-207ENST00000555243 PLB1Q6P1J6 1458 aa22.98■■□□□ 1.27
PTPN21-207ENST00000555243 ASXL2Q76L83 1435 aa22.96■■□□□ 1.27
PTPN21-207ENST00000555243 KIAA0556O60303 1618 aa22.93■■□□□ 1.26
PTPN21-207ENST00000555243 GOLGA3Q08378 1498 aa22.92■■□□□ 1.26
PTPN21-207ENST00000555243 FAM9AQ8IZU1 332 aaPredicted RBP22.92■■□□□ 1.26
PTPN21-207ENST00000555243 TSPOAP1O95153 1857 aa22.9■■□□□ 1.26
PTPN21-207ENST00000555243 KDM6BO15054 1643 aa22.9■■□□□ 1.26
PTPN21-207ENST00000555243 PRXQ9BXM0 1461 aa22.89■■□□□ 1.25
PTPN21-207ENST00000555243 CTTNBP2Q8WZ74 1663 aa22.88■■□□□ 1.25
PTPN21-207ENST00000555243 KDM5BQ9UGL1 1544 aa22.87■■□□□ 1.25
PTPN21-207ENST00000555243 GLI2P10070 1586 aa22.84■■□□□ 1.25
PTPN21-207ENST00000555243 CSRNP3Q8WYN3 585 aa22.83■■□□□ 1.25
PTPN21-207ENST00000555243 EPRSP07814 1512 aaKnown RBP22.8■■□□□ 1.24
PTPN21-207ENST00000555243 ZCCHC11Q5TAX3 1644 aaKnown RBP22.79■■□□□ 1.24
PTPN21-207ENST00000555243 TEX14Q8IWB6 1497 aa22.75■■□□□ 1.23
PTPN21-207ENST00000555243 WDR7Q9Y4E6 1490 aa22.75■■□□□ 1.23
PTPN21-207ENST00000555243 EEA1Q15075 1411 aa22.74■■□□□ 1.23
PTPN21-207ENST00000555243 P3H3Q8IVL6 736 aa22.73■■□□□ 1.23
PTPN21-207ENST00000555243 ABCA8O94911 1581 aa22.71■■□□□ 1.23
PTPN21-207ENST00000555243 KCNH8Q96L42 1107 aa22.7■■□□□ 1.22
PTPN21-207ENST00000555243 MAP3K4Q9Y6R4 1608 aa22.68■■□□□ 1.22
PTPN21-207ENST00000555243 PPRC1Q5VV67 1664 aaKnown RBP22.68■■□□□ 1.22
PTPN21-207ENST00000555243 CD109Q6YHK3 1445 aa22.64■■□□□ 1.21
PTPN21-207ENST00000555243 ARID3CA6NKF2 412 aa22.63■■□□□ 1.21
PTPN21-207ENST00000555243 KDM4FA0A1W2PPD8 638 aa22.62■■□□□ 1.21
PTPN21-207ENST00000555243 RANGAP1P46060 587 aaPredicted RBP22.62■■□□□ 1.21
PTPN21-207ENST00000555243 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.59■■□□□ 1.21
PTPN21-207ENST00000555243 HNRNPUL2Q1KMD3 747 aaKnown RBP22.59■■□□□ 1.21
PTPN21-207ENST00000555243 COL17A1Q9UMD9 1497 aaPredicted RBP22.58■■□□□ 1.2
PTPN21-207ENST00000555243 MAGI3Q5TCQ9 1506 aa22.57■■□□□ 1.2
PTPN21-207ENST00000555243 CFAP43Q8NDM7 1665 aa22.56■■□□□ 1.2
PTPN21-207ENST00000555243 SAMD9Q5K651 1589 aa22.56■■□□□ 1.2
PTPN21-207ENST00000555243 ATP10BO94823 1461 aa22.55■■□□□ 1.2
PTPN21-207ENST00000555243 RAPGEF6Q8TEU7 1601 aa22.5■■□□□ 1.19
PTPN21-207ENST00000555243 FHOD3Q2V2M9 1422 aa22.48■■□□□ 1.19
PTPN21-207ENST00000555243 ADGRL1O94910 1474 aa22.47■■□□□ 1.19
PTPN21-207ENST00000555243 KIF21BO75037 1637 aa22.46■■□□□ 1.19
PTPN21-207ENST00000555243 UBTFP17480 764 aaKnown RBP22.45■■□□□ 1.18
PTPN21-207ENST00000555243 PHLDB1Q86UU1 1377 aa22.43■■□□□ 1.18
PTPN21-207ENST00000555243 PLEKHD1A6NEE1 506 aa22.43■■□□□ 1.18
PTPN21-207ENST00000555243 EFCAB5A4FU69 1503 aa22.42■■□□□ 1.18
PTPN21-207ENST00000555243 CHIC1Q5VXU3 224 aa22.42■■□□□ 1.18
PTPN21-207ENST00000555243 EHMT2Q96KQ7 1210 aa22.42■■□□□ 1.18
PTPN21-207ENST00000555243 NUP153P49790 1475 aaKnown RBP22.41■■□□□ 1.18
PTPN21-207ENST00000555243 ABCA9Q8IUA7 1624 aa22.39■■□□□ 1.18
PTPN21-207ENST00000555243 ARAP3Q8WWN8 1544 aa22.38■■□□□ 1.17
PTPN21-207ENST00000555243 NEO1Q92859 1461 aa22.34■■□□□ 1.17
PTPN21-207ENST00000555243 ATP1B4Q9UN42 357 aaPredicted RBP22.33■■□□□ 1.17
PTPN21-207ENST00000555243 RAPGEF3O95398 923 aa22.29■■□□□ 1.16
PTPN21-207ENST00000555243 FMN1Q68DA7 1419 aa22.28■■□□□ 1.16
PTPN21-207ENST00000555243 ILDR1Q86SU0 546 aaPredicted RBP22.25■■□□□ 1.15
PTPN21-207ENST00000555243 CDK11AQ9UQ88 783 aaPredicted RBP22.25■■□□□ 1.15
PTPN21-207ENST00000555243 CDK13Q14004 1512 aaKnown RBP22.21■■□□□ 1.15
PTPN21-207ENST00000555243 ARID4BQ4LE39 1312 aaPredicted RBP22.21■■□□□ 1.15
PTPN21-207ENST00000555243 FANCAO15360 1455 aa22.21■■□□□ 1.15
PTPN21-207ENST00000555243 DENND4BO75064 1496 aaPredicted RBP22.21■■□□□ 1.15
PTPN21-207ENST00000555243 AKNAQ7Z591 1439 aa22.2■■□□□ 1.14
PTPN21-207ENST00000555243 ARHGAP35Q9NRY4 1499 aa22.2■■□□□ 1.14
PTPN21-207ENST00000555243 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.19■■□□□ 1.14
PTPN21-207ENST00000555243 CFAP74Q9C0B2 1584 aa22.19■■□□□ 1.14
PTPN21-207ENST00000555243 HECW1Q76N89 1606 aa22.19■■□□□ 1.14
PTPN21-207ENST00000555243 TTC37Q6PGP7 1564 aa22.13■■□□□ 1.13
PTPN21-207ENST00000555243 FRMPD1Q5SYB0 1578 aa22.12■■□□□ 1.13
PTPN21-207ENST00000555243 HECW2Q9P2P5 1572 aa22.12■■□□□ 1.13
PTPN21-207ENST00000555243 PLCH2O75038 1416 aa22.11■■□□□ 1.13
PTPN21-207ENST00000555243 CLIP1P30622 1438 aa22.11■■□□□ 1.13
PTPN21-207ENST00000555243 EFCAB2Q5VUJ9 269 aa22.1■■□□□ 1.13
PTPN21-207ENST00000555243 SCAPERQ9BY12 1400 aa22.07■■□□□ 1.12
PTPN21-207ENST00000555243 TROQ12816 1431 aaPredicted RBP22.06■■□□□ 1.12
PTPN21-207ENST00000555243 ARHGEF40Q8TER5 1519 aa22.06■■□□□ 1.12
PTPN21-207ENST00000555243 RICTORQ6R327 1708 aa22.06■■□□□ 1.12
PTPN21-207ENST00000555243 POGZQ7Z3K3 1410 aa22.06■■□□□ 1.12
PTPN21-207ENST00000555243 PTPRMP28827 1452 aa22.05■■□□□ 1.12
PTPN21-207ENST00000555243 MAGI2Q86UL8 1455 aa22.04■■□□□ 1.12
PTPN21-207ENST00000555243 KIF14Q15058 1648 aa22.04■■□□□ 1.12
PTPN21-207ENST00000555243 ADAMTSL3P82987 1691 aa22.04■■□□□ 1.12
PTPN21-207ENST00000555243 ZFYVE16Q7Z3T8 1539 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms