RNA–Protein interactions for RNA: ENST00000555170.1

TRIM9-204, Transcript of tripartite motif containing 9, humanhuman

TSL 4

Gene TRIM9, Length 554 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-204ENST00000555170 KDM6BO15054 1643 aa14.51□□□□□ -0.09
TRIM9-204ENST00000555170 SHROOM2Q13796 1616 aa14.51□□□□□ -0.09
TRIM9-204ENST00000555170 PRG4Q92954 1404 aaPredicted RBP14.49□□□□□ -0.09
TRIM9-204ENST00000555170 ERICH3Q5RHP9 1530 aa14.49□□□□□ -0.09
TRIM9-204ENST00000555170 JPH4Q96JJ6 628 aa14.47□□□□□ -0.09
TRIM9-204ENST00000555170 DIP2BQ9P265 1576 aa14.47□□□□□ -0.09
TRIM9-204ENST00000555170 MAPKBP1O60336 1514 aa14.44□□□□□ -0.1
TRIM9-204ENST00000555170 TSPOAP1O95153 1857 aa14.42□□□□□ -0.1
TRIM9-204ENST00000555170 FHAD1B1AJZ9 1412 aa14.41□□□□□ -0.1
TRIM9-204ENST00000555170 KIF27Q86VH2 1401 aa14.41□□□□□ -0.1
TRIM9-204ENST00000555170 ADGRL1O94910 1474 aa14.41□□□□□ -0.1
TRIM9-204ENST00000555170 CUL7Q14999 1698 aa14.41□□□□□ -0.1
TRIM9-204ENST00000555170 HECW2Q9P2P5 1572 aa14.4□□□□□ -0.1
TRIM9-204ENST00000555170 RUSC2Q8N2Y8 1516 aa14.38□□□□□ -0.11
TRIM9-204ENST00000555170 FBXO41Q8TF61 875 aa14.37□□□□□ -0.11
TRIM9-204ENST00000555170 ADCY10Q96PN6 1610 aa14.36□□□□□ -0.11
TRIM9-204ENST00000555170 IGF1RP08069 1367 aa14.35□□□□□ -0.11
TRIM9-204ENST00000555170 COL17A1Q9UMD9 1497 aaPredicted RBP14.28□□□□□ -0.12
TRIM9-204ENST00000555170 CARMIL1Q5VZK9 1371 aa14.26□□□□□ -0.13
TRIM9-204ENST00000555170 TTBK1Q5TCY1 1321 aaPredicted RBP14.23□□□□□ -0.13
TRIM9-204ENST00000555170 PPRC1Q5VV67 1664 aaKnown RBP14.23□□□□□ -0.13
TRIM9-204ENST00000555170 CHIC1Q5VXU3 224 aa14.22□□□□□ -0.13
TRIM9-204ENST00000555170 RAPGEF2Q9Y4G8 1499 aa14.21□□□□□ -0.13
TRIM9-204ENST00000555170 CTTNBP2Q8WZ74 1663 aa14.2□□□□□ -0.14
TRIM9-204ENST00000555170 PTPRGP23470 1445 aa14.19□□□□□ -0.14
TRIM9-204ENST00000555170 ASXL2Q76L83 1435 aa14.19□□□□□ -0.14
TRIM9-204ENST00000555170 KIAA0586Q9BVV6 1533 aa14.19□□□□□ -0.14
TRIM9-204ENST00000555170 PRXQ9BXM0 1461 aa14.18□□□□□ -0.14
TRIM9-204ENST00000555170 GLI2P10070 1586 aa14.17□□□□□ -0.14
TRIM9-204ENST00000555170 IQGAP2Q13576 1575 aa14.17□□□□□ -0.14
TRIM9-204ENST00000555170 PLB1Q6P1J6 1458 aa14.16□□□□□ -0.14
TRIM9-204ENST00000555170 LMTK3Q96Q04 1460 aa14.16□□□□□ -0.14
TRIM9-204ENST00000555170 ABCC2Q92887 1545 aa14.15□□□□□ -0.14
TRIM9-204ENST00000555170 EEA1Q15075 1411 aa14.15□□□□□ -0.14
TRIM9-204ENST00000555170 KIF21BO75037 1637 aa14.09□□□□□ -0.15
TRIM9-204ENST00000555170 ILDR2Q71H61 639 aa14.09□□□□□ -0.15
TRIM9-204ENST00000555170 CSRNP3Q8WYN3 585 aa14.09□□□□□ -0.15
TRIM9-204ENST00000555170 EPRSP07814 1512 aaKnown RBP14.09□□□□□ -0.15
TRIM9-204ENST00000555170 TNIKQ9UKE5 1360 aa14.09□□□□□ -0.15
TRIM9-204ENST00000555170 TEX14Q8IWB6 1497 aa14.08□□□□□ -0.16
TRIM9-204ENST00000555170 FAM9AQ8IZU1 332 aaPredicted RBP14.08□□□□□ -0.16
TRIM9-204ENST00000555170 UGGT2Q9NYU1 1516 aa14.08□□□□□ -0.16
TRIM9-204ENST00000555170 SOCS7O14512 581 aa14.07□□□□□ -0.16
TRIM9-204ENST00000555170 MAP3K4Q9Y6R4 1608 aa14.07□□□□□ -0.16
TRIM9-204ENST00000555170 DISP1Q96F81 1524 aa14.06□□□□□ -0.16
TRIM9-204ENST00000555170 KIAA0556O60303 1618 aa14.06□□□□□ -0.16
TRIM9-204ENST00000555170 UACAQ9BZF9 1416 aa14.04□□□□□ -0.16
TRIM9-204ENST00000555170 UHRF1BP1LA0JNW5 1464 aa14.04□□□□□ -0.16
TRIM9-204ENST00000555170 CARMIL2Q6F5E8 1435 aa14.03□□□□□ -0.16
TRIM9-204ENST00000555170 KDM5BQ9UGL1 1544 aa14□□□□□ -0.17
TRIM9-204ENST00000555170 DISP3Q9P2K9 1392 aa13.99□□□□□ -0.17
TRIM9-204ENST00000555170 SAMD9Q5K651 1589 aa13.98□□□□□ -0.17
TRIM9-204ENST00000555170 PTPRMP28827 1452 aa13.98□□□□□ -0.17
TRIM9-204ENST00000555170 GOLGA3Q08378 1498 aa13.96□□□□□ -0.17
TRIM9-204ENST00000555170 KCNH8Q96L42 1107 aa13.95□□□□□ -0.18
TRIM9-204ENST00000555170 CD109Q6YHK3 1445 aa13.95□□□□□ -0.18
TRIM9-204ENST00000555170 ZCCHC11Q5TAX3 1644 aaKnown RBP13.94□□□□□ -0.18
TRIM9-204ENST00000555170 CERKQ8TCT0 537 aa13.94□□□□□ -0.18
TRIM9-204ENST00000555170 MAGI3Q5TCQ9 1506 aa13.92□□□□□ -0.18
TRIM9-204ENST00000555170 WDR7Q9Y4E6 1490 aa13.92□□□□□ -0.18
TRIM9-204ENST00000555170 HSPA2P54652 639 aa13.91□□□□□ -0.18
TRIM9-204ENST00000555170 EHMT2Q96KQ7 1210 aa13.91□□□□□ -0.18
TRIM9-204ENST00000555170 PCF11O94913 1555 aaKnown RBP13.9□□□□□ -0.18
TRIM9-204ENST00000555170 ADAMTSL3P82987 1691 aa13.89□□□□□ -0.19
TRIM9-204ENST00000555170 ABCA8O94911 1581 aa13.89□□□□□ -0.19
TRIM9-204ENST00000555170 EFCAB5A4FU69 1503 aa13.87□□□□□ -0.19
TRIM9-204ENST00000555170 FHOD3Q2V2M9 1422 aa13.85□□□□□ -0.19
TRIM9-204ENST00000555170 RAPGEF3O95398 923 aa13.84□□□□□ -0.19
TRIM9-204ENST00000555170 RANGAP1P46060 587 aaPredicted RBP13.84□□□□□ -0.19
TRIM9-204ENST00000555170 P3H3Q8IVL6 736 aa13.84□□□□□ -0.19
TRIM9-204ENST00000555170 CFAP43Q8NDM7 1665 aa13.84□□□□□ -0.19
TRIM9-204ENST00000555170 ARID4BQ4LE39 1312 aaPredicted RBP13.84□□□□□ -0.19
TRIM9-204ENST00000555170 ARAP3Q8WWN8 1544 aa13.84□□□□□ -0.19
TRIM9-204ENST00000555170 UBTFP17480 764 aaKnown RBP13.83□□□□□ -0.2
TRIM9-204ENST00000555170 RAPGEF6Q8TEU7 1601 aa13.82□□□□□ -0.2
TRIM9-204ENST00000555170 PLPPR3Q6T4P5 718 aa13.82□□□□□ -0.2
TRIM9-204ENST00000555170 ARHGAP35Q9NRY4 1499 aa13.81□□□□□ -0.2
TRIM9-204ENST00000555170 MADDQ8WXG6 1647 aa13.8□□□□□ -0.2
TRIM9-204ENST00000555170 BCORL1Q5H9F3 1711 aa13.78□□□□□ -0.2
TRIM9-204ENST00000555170 NUP153P49790 1475 aaKnown RBP13.75□□□□□ -0.21
TRIM9-204ENST00000555170 ARID3CA6NKF2 412 aa13.74□□□□□ -0.21
TRIM9-204ENST00000555170 LRRIQ1Q96JM4 1722 aa13.73□□□□□ -0.21
TRIM9-204ENST00000555170 PHLDB1Q86UU1 1377 aa13.73□□□□□ -0.21
TRIM9-204ENST00000555170 SPATA31D1Q6ZQQ2 1576 aa13.73□□□□□ -0.21
TRIM9-204ENST00000555170 ATP10BO94823 1461 aa13.73□□□□□ -0.21
TRIM9-204ENST00000555170 RIMS1Q86UR5 1692 aaKnown RBP13.72□□□□□ -0.21
TRIM9-204ENST00000555170 HECW1Q76N89 1606 aa13.71□□□□□ -0.22
TRIM9-204ENST00000555170 CLIP1P30622 1438 aa13.69□□□□□ -0.22
TRIM9-204ENST00000555170 CDK13Q14004 1512 aaKnown RBP13.69□□□□□ -0.22
TRIM9-204ENST00000555170 FMN1Q68DA7 1419 aa13.68□□□□□ -0.22
TRIM9-204ENST00000555170 FRMPD1Q5SYB0 1578 aa13.66□□□□□ -0.22
TRIM9-204ENST00000555170 CEP162Q5TB80 1403 aa13.65□□□□□ -0.22
TRIM9-204ENST00000555170 MLECQ14165 292 aa13.65□□□□□ -0.22
TRIM9-204ENST00000555170 NEO1Q92859 1461 aa13.65□□□□□ -0.22
TRIM9-204ENST00000555170 DMRT2Q9Y5R5 561 aa13.64□□□□□ -0.23
TRIM9-204ENST00000555170 ABCA9Q8IUA7 1624 aa13.64□□□□□ -0.23
TRIM9-204ENST00000555170 LOC105371045A0A1W2PR82 267 aa13.63□□□□□ -0.23
TRIM9-204ENST00000555170 YEATS2Q9ULM3 1422 aa13.62□□□□□ -0.23
TRIM9-204ENST00000555170 POGZQ7Z3K3 1410 aa13.61□□□□□ -0.23
TRIM9-204ENST00000555170 CEBPAP49715 358 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms