RNA–Protein interactions for RNA: ENST00000555082.5

PRKCH-211, Transcript of protein kinase C eta, humanhuman

TSL 1 (best) BASIC

Gene PRKCH, Length 2,932 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-211ENST00000555082 P3H3Q8IVL6 736 aa15.27■□□□□ 0.03
PRKCH-211ENST00000555082 SNAPC4Q5SXM2 1469 aa15.26■□□□□ 0.03
PRKCH-211ENST00000555082 PBRM1Q86U86 1689 aa15.24■□□□□ 0.03
PRKCH-211ENST00000555082 CUL7Q14999 1698 aa15.24■□□□□ 0.03
PRKCH-211ENST00000555082 FHAD1B1AJZ9 1412 aa15.23■□□□□ 0.03
PRKCH-211ENST00000555082 CHMP7Q8WUX9 453 aaPredicted RBP15.2■□□□□ 0.02
PRKCH-211ENST00000555082 ADAMTS12P58397 1594 aa15.2■□□□□ 0.02
PRKCH-211ENST00000555082 ARAP1Q96P48 1450 aa15.18■□□□□ 0.02
PRKCH-211ENST00000555082 ARHGAP35Q9NRY4 1499 aa15.18■□□□□ 0.02
PRKCH-211ENST00000555082 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.14■□□□□ 0.01
PRKCH-211ENST00000555082 VPS8Q8N3P4 1428 aa15.13■□□□□ 0.01
PRKCH-211ENST00000555082 GRIN2AQ12879 1464 aa15.12■□□□□ 0.01
PRKCH-211ENST00000555082 FHOD3Q2V2M9 1422 aa15.12■□□□□ 0.01
PRKCH-211ENST00000555082 MAGI1Q96QZ7 1491 aaPredicted RBP15.12■□□□□ 0.01
PRKCH-211ENST00000555082 NEUROD1Q13562 356 aa15.11■□□□□ 0.01
PRKCH-211ENST00000555082 SYNJ2O15056 1496 aa15.1■□□□□ 0.01
PRKCH-211ENST00000555082 ATP1B4Q9UN42 357 aaPredicted RBP15.09■□□□□ 0.01
PRKCH-211ENST00000555082 ACIN1Q9UKV3 1341 aaKnown RBP15.08■□□□□ 0
PRKCH-211ENST00000555082 CTTNBP2Q8WZ74 1663 aa15.07■□□□□ 0
PRKCH-211ENST00000555082 CCER1Q8TC90 406 aaPredicted RBP15.06■□□□□ 0
PRKCH-211ENST00000555082 APLP2Q06481 763 aa15.04■□□□□ -0
PRKCH-211ENST00000555082 CEP170Q5SW79 1584 aa15.04■□□□□ -0
PRKCH-211ENST00000555082 KANK4Q5T7N3 995 aaPredicted RBP15.02■□□□□ -0
PRKCH-211ENST00000555082 IQGAP2Q13576 1575 aa15.02□□□□□ -0.01
PRKCH-211ENST00000555082 GTF3C3Q9Y5Q9 886 aa15.02□□□□□ -0.01
PRKCH-211ENST00000555082 KIAA0586Q9BVV6 1533 aa15.01□□□□□ -0.01
PRKCH-211ENST00000555082 ARID3CA6NKF2 412 aa14.99□□□□□ -0.01
PRKCH-211ENST00000555082 JPH4Q96JJ6 628 aa14.99□□□□□ -0.01
PRKCH-211ENST00000555082 NUP160Q12769 1436 aa14.99□□□□□ -0.01
PRKCH-211ENST00000555082 EFCAB5A4FU69 1503 aa14.97□□□□□ -0.01
PRKCH-211ENST00000555082 DIEXFQ68CQ4 756 aaKnown RBP14.96□□□□□ -0.01
PRKCH-211ENST00000555082 SAMD9Q5K651 1589 aa14.95□□□□□ -0.02
PRKCH-211ENST00000555082 CHD1O14646 1710 aa14.94□□□□□ -0.02
PRKCH-211ENST00000555082 DISP1Q96F81 1524 aa14.93□□□□□ -0.02
PRKCH-211ENST00000555082 PCF11O94913 1555 aaKnown RBP14.93□□□□□ -0.02
PRKCH-211ENST00000555082 UGGT2Q9NYU1 1516 aa14.93□□□□□ -0.02
PRKCH-211ENST00000555082 FMN1Q68DA7 1419 aa14.9□□□□□ -0.02
PRKCH-211ENST00000555082 CENPBP07199 599 aaPredicted RBP14.89□□□□□ -0.03
PRKCH-211ENST00000555082 CASKIN1Q8WXD9 1431 aa14.88□□□□□ -0.03
PRKCH-211ENST00000555082 KIAA0556O60303 1618 aa14.87□□□□□ -0.03
PRKCH-211ENST00000555082 PRG4Q92954 1404 aaPredicted RBP14.87□□□□□ -0.03
PRKCH-211ENST00000555082 FYCO1Q9BQS8 1478 aa14.84□□□□□ -0.03
PRKCH-211ENST00000555082 YTHDC1Q96MU7 727 aaKnown RBP14.84□□□□□ -0.03
PRKCH-211ENST00000555082 CARMIL2Q6F5E8 1435 aa14.83□□□□□ -0.04
PRKCH-211ENST00000555082 TIAM1Q13009 1591 aa14.83□□□□□ -0.04
PRKCH-211ENST00000555082 ERCC6L2Q5T890 1561 aa14.82□□□□□ -0.04
PRKCH-211ENST00000555082 PLB1Q6P1J6 1458 aa14.82□□□□□ -0.04
PRKCH-211ENST00000555082 HNRNPUL2Q1KMD3 747 aaKnown RBP14.81□□□□□ -0.04
PRKCH-211ENST00000555082 LRRC9Q6ZRR7 1453 aa14.8□□□□□ -0.04
PRKCH-211ENST00000555082 CDK13Q14004 1512 aaKnown RBP14.79□□□□□ -0.04
PRKCH-211ENST00000555082 OSCARQ8IYS5 282 aa14.77□□□□□ -0.04
PRKCH-211ENST00000555082 LRRIQ1Q96JM4 1722 aa14.77□□□□□ -0.05
PRKCH-211ENST00000555082 PTPRGP23470 1445 aa14.76□□□□□ -0.05
PRKCH-211ENST00000555082 MTUS2Q5JR59 1369 aa14.76□□□□□ -0.05
PRKCH-211ENST00000555082 CLASP1Q7Z460 1538 aa14.76□□□□□ -0.05
PRKCH-211ENST00000555082 PHLDB1Q86UU1 1377 aa14.75□□□□□ -0.05
PRKCH-211ENST00000555082 EPRSP07814 1512 aaKnown RBP14.75□□□□□ -0.05
PRKCH-211ENST00000555082 NUP153P49790 1475 aaKnown RBP14.75□□□□□ -0.05
PRKCH-211ENST00000555082 MAP3K1Q13233 1512 aa14.74□□□□□ -0.05
PRKCH-211ENST00000555082 ITGAEP38570 1179 aa14.74□□□□□ -0.05
PRKCH-211ENST00000555082 MAGI3Q5TCQ9 1506 aa14.73□□□□□ -0.05
PRKCH-211ENST00000555082 CFAP43Q8NDM7 1665 aa14.73□□□□□ -0.05
PRKCH-211ENST00000555082 SHROOM2Q13796 1616 aa14.72□□□□□ -0.05
PRKCH-211ENST00000555082 HECW1Q76N89 1606 aa14.72□□□□□ -0.05
PRKCH-211ENST00000555082 RAPGEF6Q8TEU7 1601 aa14.71□□□□□ -0.05
PRKCH-211ENST00000555082 FAM50AQ14320 339 aaKnown RBP14.69□□□□□ -0.06
PRKCH-211ENST00000555082 ZNF316A6NFI3 1004 aaPredicted RBP14.68□□□□□ -0.06
PRKCH-211ENST00000555082 CCDC18Q5T9S5 1454 aa14.67□□□□□ -0.06
PRKCH-211ENST00000555082 CCNB3Q8WWL7 1395 aa14.66□□□□□ -0.06
PRKCH-211ENST00000555082 ABCA8O94911 1581 aa14.66□□□□□ -0.06
PRKCH-211ENST00000555082 MYT1Q01538 1121 aa14.65□□□□□ -0.06
PRKCH-211ENST00000555082 NCOA2Q15596 1464 aa14.65□□□□□ -0.06
PRKCH-211ENST00000555082 ATP10BO94823 1461 aa14.65□□□□□ -0.06
PRKCH-211ENST00000555082 RRBP1Q9P2E9 1410 aaKnown RBP14.65□□□□□ -0.07
PRKCH-211ENST00000555082 UACAQ9BZF9 1416 aa14.64□□□□□ -0.07
PRKCH-211ENST00000555082 MIER1Q8N108 512 aa14.63□□□□□ -0.07
PRKCH-211ENST00000555082 CDK11AQ9UQ88 783 aaPredicted RBP14.62□□□□□ -0.07
PRKCH-211ENST00000555082 EHBP1L1Q8N3D4 1523 aa14.61□□□□□ -0.07
PRKCH-211ENST00000555082 PLEKHD1A6NEE1 506 aa14.6□□□□□ -0.07
PRKCH-211ENST00000555082 FGD6Q6ZV73 1430 aa14.57□□□□□ -0.08
PRKCH-211ENST00000555082 TROQ12816 1431 aaPredicted RBP14.57□□□□□ -0.08
PRKCH-211ENST00000555082 KCNH8Q96L42 1107 aa14.57□□□□□ -0.08
PRKCH-211ENST00000555082 ZNF644Q9H582 1327 aaPredicted RBP14.56□□□□□ -0.08
PRKCH-211ENST00000555082 MYOM3Q5VTT5 1437 aa14.56□□□□□ -0.08
PRKCH-211ENST00000555082 SUPT6HQ7KZ85 1726 aaKnown RBP14.56□□□□□ -0.08
PRKCH-211ENST00000555082 ABCC2Q92887 1545 aa14.55□□□□□ -0.08
PRKCH-211ENST00000555082 ARHGEF11O15085 1522 aa14.54□□□□□ -0.08
PRKCH-211ENST00000555082 ZNF777Q9ULD5 760 aaPredicted RBP14.54□□□□□ -0.08
PRKCH-211ENST00000555082 KIF14Q15058 1648 aa14.54□□□□□ -0.08
PRKCH-211ENST00000555082 CYB5RLQ6IPT4 315 aa14.52□□□□□ -0.09
PRKCH-211ENST00000555082 CHIC2Q9UKJ5 165 aa14.51□□□□□ -0.09
PRKCH-211ENST00000555082 PTPRKQ15262 1439 aa14.5□□□□□ -0.09
PRKCH-211ENST00000555082 CFDP1Q9UEE9 299 aaPredicted RBP14.49□□□□□ -0.09
PRKCH-211ENST00000555082 ADCY10Q96PN6 1610 aa14.48□□□□□ -0.09
PRKCH-211ENST00000555082 GPATCH8Q9UKJ3 1502 aaKnown RBP14.47□□□□□ -0.09
PRKCH-211ENST00000555082 UHRF1BP1LA0JNW5 1464 aa14.47□□□□□ -0.09
PRKCH-211ENST00000555082 KDM5BQ9UGL1 1544 aa14.46□□□□□ -0.09
PRKCH-211ENST00000555082 PTPN23Q9H3S7 1636 aa14.46□□□□□ -0.1
PRKCH-211ENST00000555082 ZCCHC11Q5TAX3 1644 aaKnown RBP14.45□□□□□ -0.1
PRKCH-211ENST00000555082 ABCC10Q5T3U5 1492 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms