RNA–Protein interactions for RNA: ENST00000554952.5

PSMC6-207, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 1 (best)

Gene PSMC6, Length 1,037 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-207ENST00000554952 ADAMTS12P58397 1594 aa20.67■□□□□ 0.9
PSMC6-207ENST00000554952 ERICH3Q5RHP9 1530 aa20.65■□□□□ 0.9
PSMC6-207ENST00000554952 NUP160Q12769 1436 aa20.61■□□□□ 0.89
PSMC6-207ENST00000554952 CEP170Q5SW79 1584 aa20.6■□□□□ 0.89
PSMC6-207ENST00000554952 ADRA2BP18089 450 aa20.58■□□□□ 0.89
PSMC6-207ENST00000554952 ERCC6L2Q5T890 1561 aa20.54■□□□□ 0.88
PSMC6-207ENST00000554952 JPH4Q96JJ6 628 aa20.53■□□□□ 0.88
PSMC6-207ENST00000554952 KIF27Q86VH2 1401 aa20.53■□□□□ 0.88
PSMC6-207ENST00000554952 IGF1RP08069 1367 aa20.52■□□□□ 0.88
PSMC6-207ENST00000554952 PRG4Q92954 1404 aaPredicted RBP20.47■□□□□ 0.87
PSMC6-207ENST00000554952 SHROOM2Q13796 1616 aa20.46■□□□□ 0.87
PSMC6-207ENST00000554952 CARMIL1Q5VZK9 1371 aa20.39■□□□□ 0.85
PSMC6-207ENST00000554952 CUL7Q14999 1698 aa20.36■□□□□ 0.85
PSMC6-207ENST00000554952 RUSC2Q8N2Y8 1516 aa20.36■□□□□ 0.85
PSMC6-207ENST00000554952 KIAA0586Q9BVV6 1533 aa20.36■□□□□ 0.85
PSMC6-207ENST00000554952 NPM1P06748 294 aaKnown RBP eCLIP20.29■□□□□ 0.84
PSMC6-207ENST00000554952 TTBK1Q5TCY1 1321 aaPredicted RBP20.26■□□□□ 0.83
PSMC6-207ENST00000554952 PTPRGP23470 1445 aa20.19■□□□□ 0.82
PSMC6-207ENST00000554952 RAPGEF2Q9Y4G8 1499 aa20.18■□□□□ 0.82
PSMC6-207ENST00000554952 CARMIL2Q6F5E8 1435 aa20.18■□□□□ 0.82
PSMC6-207ENST00000554952 FAM69CQ0P6D2 419 aa20.16■□□□□ 0.82
PSMC6-207ENST00000554952 IQGAP2Q13576 1575 aa20.14■□□□□ 0.81
PSMC6-207ENST00000554952 TNIKQ9UKE5 1360 aa20.14■□□□□ 0.81
PSMC6-207ENST00000554952 ADCY10Q96PN6 1610 aa20.13■□□□□ 0.81
PSMC6-207ENST00000554952 KIF13AQ9H1H9 1805 aa20.09■□□□□ 0.81
PSMC6-207ENST00000554952 ABCC10Q5T3U5 1492 aa20.08■□□□□ 0.81
PSMC6-207ENST00000554952 MAPKBP1O60336 1514 aa20.07■□□□□ 0.8
PSMC6-207ENST00000554952 DISP1Q96F81 1524 aa20.06■□□□□ 0.8
PSMC6-207ENST00000554952 UGGT2Q9NYU1 1516 aa20.02■□□□□ 0.8
PSMC6-207ENST00000554952 UACAQ9BZF9 1416 aa20.02■□□□□ 0.79
PSMC6-207ENST00000554952 ABCC2Q92887 1545 aa20■□□□□ 0.79
PSMC6-207ENST00000554952 PRXQ9BXM0 1461 aa19.99■□□□□ 0.79
PSMC6-207ENST00000554952 CSRNP3Q8WYN3 585 aa19.99■□□□□ 0.79
PSMC6-207ENST00000554952 DIP2BQ9P265 1576 aa19.98■□□□□ 0.79
PSMC6-207ENST00000554952 UHRF1BP1LA0JNW5 1464 aa19.97■□□□□ 0.79
PSMC6-207ENST00000554952 KIAA0556O60303 1618 aa19.94■□□□□ 0.78
PSMC6-207ENST00000554952 ASXL2Q76L83 1435 aa19.94■□□□□ 0.78
PSMC6-207ENST00000554952 CTTNBP2Q8WZ74 1663 aa19.93■□□□□ 0.78
PSMC6-207ENST00000554952 GOLGA3Q08378 1498 aa19.92■□□□□ 0.78
PSMC6-207ENST00000554952 PLB1Q6P1J6 1458 aa19.92■□□□□ 0.78
PSMC6-207ENST00000554952 TSPOAP1O95153 1857 aa19.91■□□□□ 0.78
PSMC6-207ENST00000554952 FAM9AQ8IZU1 332 aaPredicted RBP19.91■□□□□ 0.78
PSMC6-207ENST00000554952 P3H3Q8IVL6 736 aa19.89■□□□□ 0.77
PSMC6-207ENST00000554952 KDM5BQ9UGL1 1544 aa19.88■□□□□ 0.77
PSMC6-207ENST00000554952 EEA1Q15075 1411 aa19.83■□□□□ 0.76
PSMC6-207ENST00000554952 RANGAP1P46060 587 aaPredicted RBP19.82■□□□□ 0.76
PSMC6-207ENST00000554952 ZCCHC11Q5TAX3 1644 aaKnown RBP19.82■□□□□ 0.76
PSMC6-207ENST00000554952 GLI2P10070 1586 aa19.81■□□□□ 0.76
PSMC6-207ENST00000554952 KCNH8Q96L42 1107 aa19.8■□□□□ 0.76
PSMC6-207ENST00000554952 EPRSP07814 1512 aaKnown RBP19.8■□□□□ 0.76
PSMC6-207ENST00000554952 KDM6BO15054 1643 aa19.8■□□□□ 0.76
PSMC6-207ENST00000554952 ARID3CA6NKF2 412 aa19.78■□□□□ 0.76
PSMC6-207ENST00000554952 ABCA8O94911 1581 aa19.77■□□□□ 0.76
PSMC6-207ENST00000554952 WDR7Q9Y4E6 1490 aa19.74■□□□□ 0.75
PSMC6-207ENST00000554952 EHMT2Q96KQ7 1210 aa19.72■□□□□ 0.75
PSMC6-207ENST00000554952 PPRC1Q5VV67 1664 aaKnown RBP19.71■□□□□ 0.75
PSMC6-207ENST00000554952 MAP3K4Q9Y6R4 1608 aa19.69■□□□□ 0.74
PSMC6-207ENST00000554952 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.68■□□□□ 0.74
PSMC6-207ENST00000554952 HNRNPUL2Q1KMD3 747 aaKnown RBP19.68■□□□□ 0.74
PSMC6-207ENST00000554952 TEX14Q8IWB6 1497 aa19.67■□□□□ 0.74
PSMC6-207ENST00000554952 ATP10BO94823 1461 aa19.67■□□□□ 0.74
PSMC6-207ENST00000554952 SAMD9Q5K651 1589 aa19.66■□□□□ 0.74
PSMC6-207ENST00000554952 UBTFP17480 764 aaKnown RBP19.66■□□□□ 0.74
PSMC6-207ENST00000554952 CD109Q6YHK3 1445 aa19.66■□□□□ 0.74
PSMC6-207ENST00000554952 COL17A1Q9UMD9 1497 aaPredicted RBP19.65■□□□□ 0.74
PSMC6-207ENST00000554952 FHOD3Q2V2M9 1422 aa19.62■□□□□ 0.73
PSMC6-207ENST00000554952 KDM4FA0A1W2PPD8 638 aa19.62■□□□□ 0.73
PSMC6-207ENST00000554952 KIF21BO75037 1637 aa19.62■□□□□ 0.73
PSMC6-207ENST00000554952 RAPGEF6Q8TEU7 1601 aa19.58■□□□□ 0.73
PSMC6-207ENST00000554952 MAGI3Q5TCQ9 1506 aa19.58■□□□□ 0.73
PSMC6-207ENST00000554952 CFAP43Q8NDM7 1665 aa19.57■□□□□ 0.72
PSMC6-207ENST00000554952 PLEKHD1A6NEE1 506 aa19.54■□□□□ 0.72
PSMC6-207ENST00000554952 NUP153P49790 1475 aaKnown RBP19.54■□□□□ 0.72
PSMC6-207ENST00000554952 EFCAB5A4FU69 1503 aa19.51■□□□□ 0.71
PSMC6-207ENST00000554952 ATP1B4Q9UN42 357 aaPredicted RBP19.5■□□□□ 0.71
PSMC6-207ENST00000554952 ABCA9Q8IUA7 1624 aa19.46■□□□□ 0.71
PSMC6-207ENST00000554952 ADGRL1O94910 1474 aa19.44■□□□□ 0.7
PSMC6-207ENST00000554952 PHLDB1Q86UU1 1377 aa19.44■□□□□ 0.7
PSMC6-207ENST00000554952 ARAP3Q8WWN8 1544 aa19.43■□□□□ 0.7
PSMC6-207ENST00000554952 RAPGEF3O95398 923 aa19.43■□□□□ 0.7
PSMC6-207ENST00000554952 ARHGAP35Q9NRY4 1499 aa19.41■□□□□ 0.7
PSMC6-207ENST00000554952 FMN1Q68DA7 1419 aa19.4■□□□□ 0.7
PSMC6-207ENST00000554952 NEO1Q92859 1461 aa19.38■□□□□ 0.69
PSMC6-207ENST00000554952 CDK13Q14004 1512 aaKnown RBP19.37■□□□□ 0.69
PSMC6-207ENST00000554952 CDK11AQ9UQ88 783 aaPredicted RBP19.36■□□□□ 0.69
PSMC6-207ENST00000554952 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.32■□□□□ 0.68
PSMC6-207ENST00000554952 AKNAQ7Z591 1439 aa19.31■□□□□ 0.68
PSMC6-207ENST00000554952 HECW1Q76N89 1606 aa19.29■□□□□ 0.68
PSMC6-207ENST00000554952 FANCAO15360 1455 aa19.29■□□□□ 0.68
PSMC6-207ENST00000554952 DENND4BO75064 1496 aaPredicted RBP19.28■□□□□ 0.68
PSMC6-207ENST00000554952 TTC37Q6PGP7 1564 aa19.27■□□□□ 0.68
PSMC6-207ENST00000554952 ARID4BQ4LE39 1312 aaPredicted RBP19.27■□□□□ 0.68
PSMC6-207ENST00000554952 PLCH2O75038 1416 aa19.25■□□□□ 0.67
PSMC6-207ENST00000554952 EFCAB2Q5VUJ9 269 aa19.24■□□□□ 0.67
PSMC6-207ENST00000554952 FRMPD1Q5SYB0 1578 aa19.23■□□□□ 0.67
PSMC6-207ENST00000554952 TROQ12816 1431 aaPredicted RBP19.21■□□□□ 0.67
PSMC6-207ENST00000554952 CFAP74Q9C0B2 1584 aa19.21■□□□□ 0.67
PSMC6-207ENST00000554952 CLIP1P30622 1438 aa19.2■□□□□ 0.66
PSMC6-207ENST00000554952 CASKIN1Q8WXD9 1431 aa19.2■□□□□ 0.66
PSMC6-207ENST00000554952 SCAPERQ9BY12 1400 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms