RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 SNAPC4Q5SXM2 1469 aa19.18■□□□□ 0.66
PPP4R3A-206ENST00000554943 FYCO1Q9BQS8 1478 aa19.18■□□□□ 0.66
PPP4R3A-206ENST00000554943 PBRM1Q86U86 1689 aa19.17■□□□□ 0.66
PPP4R3A-206ENST00000554943 KANK4Q5T7N3 995 aaPredicted RBP19.17■□□□□ 0.66
PPP4R3A-206ENST00000554943 THOC2Q8NI27 1593 aaKnown RBP19.16■□□□□ 0.66
PPP4R3A-206ENST00000554943 TTBK1Q5TCY1 1321 aaPredicted RBP19.15■□□□□ 0.66
PPP4R3A-206ENST00000554943 DHX57Q6P158 1386 aaKnown RBP19.15■□□□□ 0.66
PPP4R3A-206ENST00000554943 CASKIN1Q8WXD9 1431 aa19.1■□□□□ 0.65
PPP4R3A-206ENST00000554943 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.1■□□□□ 0.65
PPP4R3A-206ENST00000554943 FHAD1B1AJZ9 1412 aa19.09■□□□□ 0.65
PPP4R3A-206ENST00000554943 MAPKBP1O60336 1514 aa19.09■□□□□ 0.65
PPP4R3A-206ENST00000554943 ARHGEF11O15085 1522 aa19.08■□□□□ 0.64
PPP4R3A-206ENST00000554943 CCNB3Q8WWL7 1395 aa19.06■□□□□ 0.64
PPP4R3A-206ENST00000554943 GRIN2BQ13224 1484 aa19.03■□□□□ 0.64
PPP4R3A-206ENST00000554943 ADAMTS12P58397 1594 aa19.03■□□□□ 0.64
PPP4R3A-206ENST00000554943 PDS5BQ9NTI5 1447 aa19.01■□□□□ 0.63
PPP4R3A-206ENST00000554943 GAPVD1Q14C86 1478 aa18.99■□□□□ 0.63
PPP4R3A-206ENST00000554943 PHLDB1Q86UU1 1377 aa18.98■□□□□ 0.63
PPP4R3A-206ENST00000554943 WDR62O43379 1518 aa18.98■□□□□ 0.63
PPP4R3A-206ENST00000554943 ZNF316A6NFI3 1004 aaPredicted RBP18.95■□□□□ 0.62
PPP4R3A-206ENST00000554943 FHOD3Q2V2M9 1422 aa18.91■□□□□ 0.62
PPP4R3A-206ENST00000554943 FMN1Q68DA7 1419 aa18.91■□□□□ 0.62
PPP4R3A-206ENST00000554943 APLP2Q06481 763 aa18.91■□□□□ 0.62
PPP4R3A-206ENST00000554943 DIEXFQ68CQ4 756 aaKnown RBP18.91■□□□□ 0.62
PPP4R3A-206ENST00000554943 HNRNPUL2Q1KMD3 747 aaKnown RBP18.89■□□□□ 0.61
PPP4R3A-206ENST00000554943 SCAF1Q9H7N4 1312 aaKnown RBP18.89■□□□□ 0.61
PPP4R3A-206ENST00000554943 MAGI3Q5TCQ9 1506 aa18.88■□□□□ 0.61
PPP4R3A-206ENST00000554943 UGGT2Q9NYU1 1516 aa18.88■□□□□ 0.61
PPP4R3A-206ENST00000554943 MRC2Q9UBG0 1479 aa18.88■□□□□ 0.61
PPP4R3A-206ENST00000554943 SUPT6HQ7KZ85 1726 aaKnown RBP18.88■□□□□ 0.61
PPP4R3A-206ENST00000554943 GCC2Q8IWJ2 1684 aa18.86■□□□□ 0.61
PPP4R3A-206ENST00000554943 EHBP1L1Q8N3D4 1523 aa18.86■□□□□ 0.61
PPP4R3A-206ENST00000554943 TCOF1Q13428 1488 aaKnown RBP18.85■□□□□ 0.61
PPP4R3A-206ENST00000554943 IQGAP2Q13576 1575 aa18.85■□□□□ 0.61
PPP4R3A-206ENST00000554943 RAB3GAP2Q9H2M9 1393 aa18.83■□□□□ 0.6
PPP4R3A-206ENST00000554943 DNAJC5BQ9UF47 199 aa18.83■□□□□ 0.6
PPP4R3A-206ENST00000554943 SETD5Q9C0A6 1442 aa18.82■□□□□ 0.6
PPP4R3A-206ENST00000554943 HECW1Q76N89 1606 aa18.81■□□□□ 0.6
PPP4R3A-206ENST00000554943 PTPN23Q9H3S7 1636 aa18.8■□□□□ 0.6
PPP4R3A-206ENST00000554943 FGD6Q6ZV73 1430 aa18.79■□□□□ 0.6
PPP4R3A-206ENST00000554943 CCDC18Q5T9S5 1454 aa18.79■□□□□ 0.6
PPP4R3A-206ENST00000554943 ACIN1Q9UKV3 1341 aaKnown RBP18.77■□□□□ 0.6
PPP4R3A-206ENST00000554943 KDM5BQ9UGL1 1544 aa18.77■□□□□ 0.59
PPP4R3A-206ENST00000554943 IFT140Q96RY7 1462 aa18.76■□□□□ 0.59
PPP4R3A-206ENST00000554943 TDRD9Q8NDG6 1382 aaKnown RBP18.76■□□□□ 0.59
PPP4R3A-206ENST00000554943 EIF4G3O43432 1585 aaKnown RBP18.75■□□□□ 0.59
PPP4R3A-206ENST00000554943 PTPRKQ15262 1439 aa18.74■□□□□ 0.59
PPP4R3A-206ENST00000554943 KIAA0556O60303 1618 aa18.74■□□□□ 0.59
PPP4R3A-206ENST00000554943 HFM1A2PYH4 1435 aa18.74■□□□□ 0.59
PPP4R3A-206ENST00000554943 RANGAP1P46060 587 aaPredicted RBP18.73■□□□□ 0.59
PPP4R3A-206ENST00000554943 NCOA2Q15596 1464 aa18.72■□□□□ 0.59
PPP4R3A-206ENST00000554943 AKNAQ7Z591 1439 aa18.72■□□□□ 0.59
PPP4R3A-206ENST00000554943 DISP1Q96F81 1524 aa18.71■□□□□ 0.59
PPP4R3A-206ENST00000554943 ADCY10Q96PN6 1610 aa18.71■□□□□ 0.59
PPP4R3A-206ENST00000554943 MYOM3Q5VTT5 1437 aa18.7■□□□□ 0.58
PPP4R3A-206ENST00000554943 NEUROD1Q13562 356 aa18.7■□□□□ 0.58
PPP4R3A-206ENST00000554943 DENND4BO75064 1496 aaPredicted RBP18.68■□□□□ 0.58
PPP4R3A-206ENST00000554943 EPRSP07814 1512 aaKnown RBP18.67■□□□□ 0.58
PPP4R3A-206ENST00000554943 ZNF608Q9ULD9 1512 aaPredicted RBP18.64■□□□□ 0.58
PPP4R3A-206ENST00000554943 KIAA0586Q9BVV6 1533 aa18.63■□□□□ 0.57
PPP4R3A-206ENST00000554943 NAIPQ13075 1403 aa18.63■□□□□ 0.57
PPP4R3A-206ENST00000554943 CEP170Q5SW79 1584 aa18.62■□□□□ 0.57
PPP4R3A-206ENST00000554943 RAPGEF6Q8TEU7 1601 aa18.61■□□□□ 0.57
PPP4R3A-206ENST00000554943 TIMELESSQ9UNS1 1208 aa18.61■□□□□ 0.57
PPP4R3A-206ENST00000554943 CROCC2H7BZ55 1655 aa18.61■□□□□ 0.57
PPP4R3A-206ENST00000554943 MIA2Q96PC5 1412 aa18.6■□□□□ 0.57
PPP4R3A-206ENST00000554943 UACAQ9BZF9 1416 aa18.6■□□□□ 0.57
PPP4R3A-206ENST00000554943 GRIN2AQ12879 1464 aa18.59■□□□□ 0.57
PPP4R3A-206ENST00000554943 KDM6BO15054 1643 aa18.59■□□□□ 0.57
PPP4R3A-206ENST00000554943 DNMT1P26358 1616 aaKnown RBP18.59■□□□□ 0.57
PPP4R3A-206ENST00000554943 MIER1Q8N108 512 aa18.59■□□□□ 0.57
PPP4R3A-206ENST00000554943 MAGI1Q96QZ7 1491 aaPredicted RBP18.58■□□□□ 0.57
PPP4R3A-206ENST00000554943 NUP153P49790 1475 aaKnown RBP18.55■□□□□ 0.56
PPP4R3A-206ENST00000554943 CDK13Q14004 1512 aaKnown RBP18.53■□□□□ 0.56
PPP4R3A-206ENST00000554943 ADGBQ8N7X0 1667 aa18.52■□□□□ 0.56
PPP4R3A-206ENST00000554943 NUP160Q12769 1436 aa18.52■□□□□ 0.56
PPP4R3A-206ENST00000554943 ITSN2Q9NZM3 1697 aa18.5■□□□□ 0.55
PPP4R3A-206ENST00000554943 POLR1AO95602 1720 aaPredicted RBP18.49■□□□□ 0.55
PPP4R3A-206ENST00000554943 P3H3Q8IVL6 736 aa18.48■□□□□ 0.55
PPP4R3A-206ENST00000554943 SYNJ2O15056 1496 aa18.48■□□□□ 0.55
PPP4R3A-206ENST00000554943 ABCA8O94911 1581 aa18.47■□□□□ 0.55
PPP4R3A-206ENST00000554943 MTUS2Q5JR59 1369 aa18.47■□□□□ 0.55
PPP4R3A-206ENST00000554943 ROCK1Q13464 1354 aa18.45■□□□□ 0.54
PPP4R3A-206ENST00000554943 CENPBP07199 599 aaPredicted RBP18.45■□□□□ 0.54
PPP4R3A-206ENST00000554943 CDC42BPAQ5VT25 1732 aa18.42■□□□□ 0.54
PPP4R3A-206ENST00000554943 SHROOM2Q13796 1616 aa18.41■□□□□ 0.54
PPP4R3A-206ENST00000554943 ADGRL2O95490 1459 aa18.4■□□□□ 0.54
PPP4R3A-206ENST00000554943 KIF14Q15058 1648 aa18.38■□□□□ 0.53
PPP4R3A-206ENST00000554943 PPP1R15AO75807 674 aaPredicted RBP18.37■□□□□ 0.53
PPP4R3A-206ENST00000554943 DAPK1P53355 1430 aa18.37■□□□□ 0.53
PPP4R3A-206ENST00000554943 YTHDC1Q96MU7 727 aaKnown RBP18.34■□□□□ 0.53
PPP4R3A-206ENST00000554943 ABCC5O15440 1437 aa18.34■□□□□ 0.53
PPP4R3A-206ENST00000554943 GTF3C3Q9Y5Q9 886 aa18.34■□□□□ 0.53
PPP4R3A-206ENST00000554943 ABCC10Q5T3U5 1492 aa18.34■□□□□ 0.53
PPP4R3A-206ENST00000554943 FAM50AQ14320 339 aaKnown RBP18.33■□□□□ 0.52
PPP4R3A-206ENST00000554943 KDM5DQ9BY66 1539 aa18.31■□□□□ 0.52
PPP4R3A-206ENST00000554943 SIN3AQ96ST3 1273 aa18.31■□□□□ 0.52
PPP4R3A-206ENST00000554943 TEX14Q8IWB6 1497 aa18.31■□□□□ 0.52
PPP4R3A-206ENST00000554943 TROQ12816 1431 aaPredicted RBP18.3■□□□□ 0.52
PPP4R3A-206ENST00000554943 MBD5Q9P267 1494 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms