RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 ARAP1Q96P48 1450 aa21.65■■□□□ 1.06
MTHFD1-208ENST00000554739 RAPGEF2Q9Y4G8 1499 aa21.65■■□□□ 1.06
MTHFD1-208ENST00000554739 CSRNP3Q8WYN3 585 aa21.65■■□□□ 1.06
MTHFD1-208ENST00000554739 PRXQ9BXM0 1461 aa21.61■■□□□ 1.05
MTHFD1-208ENST00000554739 SHROOM2Q13796 1616 aa21.61■■□□□ 1.05
MTHFD1-208ENST00000554739 PRG4Q92954 1404 aaPredicted RBP21.6■■□□□ 1.05
MTHFD1-208ENST00000554739 EEA1Q15075 1411 aa21.59■■□□□ 1.05
MTHFD1-208ENST00000554739 ERCC6L2Q5T890 1561 aa21.59■■□□□ 1.05
MTHFD1-208ENST00000554739 FAM9AQ8IZU1 332 aaPredicted RBP21.57■■□□□ 1.04
MTHFD1-208ENST00000554739 IQGAP2Q13576 1575 aa21.46■■□□□ 1.03
MTHFD1-208ENST00000554739 CARMIL2Q6F5E8 1435 aa21.4■■□□□ 1.02
MTHFD1-208ENST00000554739 UGGT2Q9NYU1 1516 aa21.39■■□□□ 1.01
MTHFD1-208ENST00000554739 DISP1Q96F81 1524 aa21.38■■□□□ 1.01
MTHFD1-208ENST00000554739 PTPRGP23470 1445 aa21.36■■□□□ 1.01
MTHFD1-208ENST00000554739 TNIKQ9UKE5 1360 aa21.36■■□□□ 1.01
MTHFD1-208ENST00000554739 TTBK1Q5TCY1 1321 aaPredicted RBP21.31■■□□□ 1
MTHFD1-208ENST00000554739 KIF21BO75037 1637 aa21.31■■□□□ 1
MTHFD1-208ENST00000554739 CTTNBP2Q8WZ74 1663 aa21.31■■□□□ 1
MTHFD1-208ENST00000554739 EHMT2Q96KQ7 1210 aa21.27■■□□□ 1
MTHFD1-208ENST00000554739 GOLGA3Q08378 1498 aa21.26■□□□□ 0.99
MTHFD1-208ENST00000554739 UBTFP17480 764 aaKnown RBP21.25■□□□□ 0.99
MTHFD1-208ENST00000554739 KIAA0556O60303 1618 aa21.25■□□□□ 0.99
MTHFD1-208ENST00000554739 TRHP20396 242 aaPredicted RBP21.23■□□□□ 0.99
MTHFD1-208ENST00000554739 NPM1P06748 294 aaKnown RBP eCLIP21.22■□□□□ 0.99
MTHFD1-208ENST00000554739 P3H3Q8IVL6 736 aa21.21■□□□□ 0.99
MTHFD1-208ENST00000554739 RANGAP1P46060 587 aaPredicted RBP21.2■□□□□ 0.98
MTHFD1-208ENST00000554739 ADCY10Q96PN6 1610 aa21.19■□□□□ 0.98
MTHFD1-208ENST00000554739 UACAQ9BZF9 1416 aa21.19■□□□□ 0.98
MTHFD1-208ENST00000554739 UHRF1BP1LA0JNW5 1464 aa21.16■□□□□ 0.98
MTHFD1-208ENST00000554739 SAMD9Q5K651 1589 aa21.13■□□□□ 0.97
MTHFD1-208ENST00000554739 ABCC2Q92887 1545 aa21.12■□□□□ 0.97
MTHFD1-208ENST00000554739 PLB1Q6P1J6 1458 aa21.11■□□□□ 0.97
MTHFD1-208ENST00000554739 MAPKBP1O60336 1514 aa21.07■□□□□ 0.96
MTHFD1-208ENST00000554739 KDM5BQ9UGL1 1544 aa21.06■□□□□ 0.96
MTHFD1-208ENST00000554739 FHOD3Q2V2M9 1422 aa21.05■□□□□ 0.96
MTHFD1-208ENST00000554739 ABCA8O94911 1581 aa21.05■□□□□ 0.96
MTHFD1-208ENST00000554739 EFCAB5A4FU69 1503 aa21.04■□□□□ 0.96
MTHFD1-208ENST00000554739 ABCC10Q5T3U5 1492 aa21.01■□□□□ 0.95
MTHFD1-208ENST00000554739 FAM69CQ0P6D2 419 aa21.01■□□□□ 0.95
MTHFD1-208ENST00000554739 ASXL2Q76L83 1435 aa21■□□□□ 0.95
MTHFD1-208ENST00000554739 ARHGAP35Q9NRY4 1499 aa21■□□□□ 0.95
MTHFD1-208ENST00000554739 ARID3CA6NKF2 412 aa20.95■□□□□ 0.94
MTHFD1-208ENST00000554739 ATP10BO94823 1461 aa20.94■□□□□ 0.94
MTHFD1-208ENST00000554739 ZCCHC11Q5TAX3 1644 aaKnown RBP20.93■□□□□ 0.94
MTHFD1-208ENST00000554739 LOC105371045A0A1W2PR82 267 aa20.93■□□□□ 0.94
MTHFD1-208ENST00000554739 DIP2BQ9P265 1576 aa20.91■□□□□ 0.94
MTHFD1-208ENST00000554739 NUP153P49790 1475 aaKnown RBP20.9■□□□□ 0.94
MTHFD1-208ENST00000554739 RAPGEF6Q8TEU7 1601 aa20.89■□□□□ 0.94
MTHFD1-208ENST00000554739 FMN1Q68DA7 1419 aa20.89■□□□□ 0.94
MTHFD1-208ENST00000554739 CLIP1P30622 1438 aa20.88■□□□□ 0.93
MTHFD1-208ENST00000554739 KIF13AQ9H1H9 1805 aa20.88■□□□□ 0.93
MTHFD1-208ENST00000554739 WDR7Q9Y4E6 1490 aa20.88■□□□□ 0.93
MTHFD1-208ENST00000554739 EPRSP07814 1512 aaKnown RBP20.87■□□□□ 0.93
MTHFD1-208ENST00000554739 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.86■□□□□ 0.93
MTHFD1-208ENST00000554739 HNRNPUL2Q1KMD3 747 aaKnown RBP20.86■□□□□ 0.93
MTHFD1-208ENST00000554739 KCNH8Q96L42 1107 aa20.86■□□□□ 0.93
MTHFD1-208ENST00000554739 GLI2P10070 1586 aa20.84■□□□□ 0.93
MTHFD1-208ENST00000554739 ATP1B4Q9UN42 357 aaPredicted RBP20.82■□□□□ 0.92
MTHFD1-208ENST00000554739 PLEKHD1A6NEE1 506 aa20.79■□□□□ 0.92
MTHFD1-208ENST00000554739 CEP162Q5TB80 1403 aa20.78■□□□□ 0.92
MTHFD1-208ENST00000554739 CASKIN1Q8WXD9 1431 aa20.75■□□□□ 0.91
MTHFD1-208ENST00000554739 CDK13Q14004 1512 aaKnown RBP20.73■□□□□ 0.91
MTHFD1-208ENST00000554739 HECW1Q76N89 1606 aa20.71■□□□□ 0.91
MTHFD1-208ENST00000554739 CD109Q6YHK3 1445 aa20.71■□□□□ 0.91
MTHFD1-208ENST00000554739 MAP3K4Q9Y6R4 1608 aa20.7■□□□□ 0.9
MTHFD1-208ENST00000554739 CDK11AQ9UQ88 783 aaPredicted RBP20.69■□□□□ 0.9
MTHFD1-208ENST00000554739 FYCO1Q9BQS8 1478 aa20.66■□□□□ 0.9
MTHFD1-208ENST00000554739 PCF11O94913 1555 aaKnown RBP20.66■□□□□ 0.9
MTHFD1-208ENST00000554739 TSPOAP1O95153 1857 aa20.66■□□□□ 0.9
MTHFD1-208ENST00000554739 PPRC1Q5VV67 1664 aaKnown RBP20.65■□□□□ 0.9
MTHFD1-208ENST00000554739 MAGI3Q5TCQ9 1506 aa20.65■□□□□ 0.9
MTHFD1-208ENST00000554739 TEX14Q8IWB6 1497 aa20.63■□□□□ 0.89
MTHFD1-208ENST00000554739 CFAP43Q8NDM7 1665 aa20.62■□□□□ 0.89
MTHFD1-208ENST00000554739 ABCA9Q8IUA7 1624 aa20.62■□□□□ 0.89
MTHFD1-208ENST00000554739 CCDC18Q5T9S5 1454 aa20.62■□□□□ 0.89
MTHFD1-208ENST00000554739 COL17A1Q9UMD9 1497 aaPredicted RBP20.59■□□□□ 0.89
MTHFD1-208ENST00000554739 TROQ12816 1431 aaPredicted RBP20.59■□□□□ 0.89
MTHFD1-208ENST00000554739 LRRIQ1Q96JM4 1722 aa20.58■□□□□ 0.88
MTHFD1-208ENST00000554739 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.57■□□□□ 0.88
MTHFD1-208ENST00000554739 KDM6BO15054 1643 aa20.56■□□□□ 0.88
MTHFD1-208ENST00000554739 VPS8Q8N3P4 1428 aa20.53■□□□□ 0.88
MTHFD1-208ENST00000554739 PHLDB1Q86UU1 1377 aa20.53■□□□□ 0.88
MTHFD1-208ENST00000554739 PLCH2O75038 1416 aa20.51■□□□□ 0.87
MTHFD1-208ENST00000554739 TTC37Q6PGP7 1564 aa20.51■□□□□ 0.87
MTHFD1-208ENST00000554739 NEO1Q92859 1461 aa20.5■□□□□ 0.87
MTHFD1-208ENST00000554739 ARAP3Q8WWN8 1544 aa20.48■□□□□ 0.87
MTHFD1-208ENST00000554739 KIF14Q15058 1648 aa20.48■□□□□ 0.87
MTHFD1-208ENST00000554739 FANCAO15360 1455 aa20.45■□□□□ 0.86
MTHFD1-208ENST00000554739 EFCAB2Q5VUJ9 269 aa20.45■□□□□ 0.86
MTHFD1-208ENST00000554739 AKNAQ7Z591 1439 aa20.44■□□□□ 0.86
MTHFD1-208ENST00000554739 MTUS2Q5JR59 1369 aa20.44■□□□□ 0.86
MTHFD1-208ENST00000554739 RAPGEF3O95398 923 aa20.43■□□□□ 0.86
MTHFD1-208ENST00000554739 KANK4Q5T7N3 995 aaPredicted RBP20.36■□□□□ 0.85
MTHFD1-208ENST00000554739 TIAM1Q13009 1591 aa20.36■□□□□ 0.85
MTHFD1-208ENST00000554739 GPATCH8Q9UKJ3 1502 aaKnown RBP20.36■□□□□ 0.85
MTHFD1-208ENST00000554739 DENND4BO75064 1496 aaPredicted RBP20.36■□□□□ 0.85
MTHFD1-208ENST00000554739 SCAPERQ9BY12 1400 aa20.36■□□□□ 0.85
MTHFD1-208ENST00000554739 ARHGAP5Q13017 1502 aa20.35■□□□□ 0.85
MTHFD1-208ENST00000554739 MAP3K1Q13233 1512 aa20.35■□□□□ 0.85
MTHFD1-208ENST00000554739 CFAP74Q9C0B2 1584 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms