RNA–Protein interactions for RNA: ENST00000554546.5

NUMB-212, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NUMB, Length 3,607 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-212ENST00000554546 DCAF8L2P0C7V8 631 aa15.37■□□□□ 0.05
NUMB-212ENST00000554546 WRNQ14191 1432 aaPredicted RBP eCLIP15.36■□□□□ 0.05
NUMB-212ENST00000554546 NPM2Q86SE8 214 aaKnown RBP15.36■□□□□ 0.05
NUMB-212ENST00000554546 RRP9O43818 475 aaKnown RBP15.35■□□□□ 0.05
NUMB-212ENST00000554546 ZCCHC6Q5VYS8 1495 aaKnown RBP15.34■□□□□ 0.05
NUMB-212ENST00000554546 FRAT1Q92837 279 aaPredicted RBP15.33■□□□□ 0.04
NUMB-212ENST00000554546 HSP90AA1P07900 732 aaKnown RBP15.32■□□□□ 0.04
NUMB-212ENST00000554546 HNRNPUQ00839 825 aaKnown RBP eCLIP15.32■□□□□ 0.042e-6■■■■□ 20.6
NUMB-212ENST00000554546 NAP1L5Q96NT1 182 aaPredicted RBP15.31■□□□□ 0.04
NUMB-212ENST00000554546 PPM1GO15355 546 aaPredicted RBP15.31■□□□□ 0.04
NUMB-212ENST00000554546 ANP32CO43423 234 aa15.29■□□□□ 0.04
NUMB-212ENST00000554546 CCER2I3L3R5 266 aa15.28■□□□□ 0.04
NUMB-212ENST00000554546 DCAF11Q8TEB1 546 aa15.25■□□□□ 0.03
NUMB-212ENST00000554546 CEP162Q5TB80 1403 aa15.23■□□□□ 0.03
NUMB-212ENST00000554546 RRAGDQ9NQL2 400 aaPredicted RBP15.23■□□□□ 0.03
NUMB-212ENST00000554546 DHX57Q6P158 1386 aaKnown RBP15.22■□□□□ 0.03
NUMB-212ENST00000554546 RGS3P49796 1198 aa15.21■□□□□ 0.03
NUMB-212ENST00000554546 KLHL34Q8N239 644 aa15.21■□□□□ 0.02
NUMB-212ENST00000554546 SIN3AQ96ST3 1273 aa15.18■□□□□ 0.02
NUMB-212ENST00000554546 NFKBIBQ15653 356 aa15.18■□□□□ 0.02
NUMB-212ENST00000554546 TAF7LQ5H9L4 462 aa15.18■□□□□ 0.02
NUMB-212ENST00000554546 PPP1R15AO75807 674 aaPredicted RBP15.16■□□□□ 0.02
NUMB-212ENST00000554546 ARID4BQ4LE39 1312 aaPredicted RBP15.16■□□□□ 0.02
NUMB-212ENST00000554546 PNNQ9H307 717 aaKnown RBP15.16■□□□□ 0.02
NUMB-212ENST00000554546 HIRIP3Q9BW71 556 aaPredicted RBP15.15■□□□□ 0.02
NUMB-212ENST00000554546 PRDM4Q9UKN5 801 aa15.15■□□□□ 0.02
NUMB-212ENST00000554546 NACADO15069 1562 aa15.13■□□□□ 0.01
NUMB-212ENST00000554546 BBXQ8WY36 941 aaPredicted RBP15.13■□□□□ 0.01
NUMB-212ENST00000554546 PAXIP1Q6ZW49 1069 aaPredicted RBP15.12■□□□□ 0.01
NUMB-212ENST00000554546 NAP1L2Q9ULW6 460 aaPredicted RBP15.11■□□□□ 0.01
NUMB-212ENST00000554546 CHMP4BQ9H444 224 aaKnown RBP15.1■□□□□ 0.01
NUMB-212ENST00000554546 EEA1Q15075 1411 aa15.09■□□□□ 0.01
NUMB-212ENST00000554546 CALD1Q05682 793 aaKnown RBP15.08■□□□□ 0
NUMB-212ENST00000554546 UBTFP17480 764 aaKnown RBP15.06■□□□□ 0
NUMB-212ENST00000554546 BAZ1BQ9UIG0 1483 aaKnown RBP15.03■□□□□ -0
NUMB-212ENST00000554546 SLC4A3P48751 1232 aa15.03■□□□□ -0
NUMB-212ENST00000554546 PDCL3Q9H2J4 239 aa15□□□□□ -0.01
NUMB-212ENST00000554546 FRAT2O75474 233 aaPredicted RBP15□□□□□ -0.01
NUMB-212ENST00000554546 GTF2E1P29083 439 aaPredicted RBP15□□□□□ -0.01
NUMB-212ENST00000554546 RANGAP1P46060 587 aaPredicted RBP15□□□□□ -0.01
NUMB-212ENST00000554546 PDE4AP27815 886 aa14.99□□□□□ -0.01
NUMB-212ENST00000554546 TNIKQ9UKE5 1360 aa14.97□□□□□ -0.01
NUMB-212ENST00000554546 ARXQ96QS3 562 aa14.97□□□□□ -0.01
NUMB-212ENST00000554546 CANXP27824 592 aaKnown RBP14.97□□□□□ -0.01
NUMB-212ENST00000554546 CLCN1P35523 988 aa14.97□□□□□ -0.01
NUMB-212ENST00000554546 DDRGK1Q96HY6 314 aa14.96□□□□□ -0.02
NUMB-212ENST00000554546 RB1CC1Q8TDY2 1594 aa14.95□□□□□ -0.02
NUMB-212ENST00000554546 STAC3Q96MF2 364 aa14.94□□□□□ -0.02
NUMB-212ENST00000554546 CENPJQ9HC77 1338 aaPredicted RBP14.94□□□□□ -0.02
NUMB-212ENST00000554546 ZHX1Q9UKY1 873 aaPredicted RBP14.93□□□□□ -0.02
NUMB-212ENST00000554546 BACH2Q9BYV9 841 aa14.92□□□□□ -0.02
NUMB-212ENST00000554546 FAM9BQ8IZU0 186 aa14.9□□□□□ -0.02
NUMB-212ENST00000554546 TCERG1O14776 1098 aaKnown RBP14.9□□□□□ -0.02
NUMB-212ENST00000554546 CNGB1Q14028 1251 aaPredicted RBP14.89□□□□□ -0.03
NUMB-212ENST00000554546 POGKQ9P215 609 aa14.89□□□□□ -0.03
NUMB-212ENST00000554546 IPO4Q8TEX9 1081 aaKnown RBP14.89□□□□□ -0.03
NUMB-212ENST00000554546 L1TD1Q5T7N2 865 aaKnown RBP14.88□□□□□ -0.03
NUMB-212ENST00000554546 RSF1Q96T23 1441 aaPredicted RBP14.88□□□□□ -0.03
NUMB-212ENST00000554546 PLCD3Q8N3E9 789 aa14.86□□□□□ -0.03
NUMB-212ENST00000554546 RSPH4AQ5TD94 716 aa14.85□□□□□ -0.03
NUMB-212ENST00000554546 AKNAQ7Z591 1439 aa14.85□□□□□ -0.03
NUMB-212ENST00000554546 FOXD1Q16676 465 aa14.85□□□□□ -0.03
NUMB-212ENST00000554546 WDR97A6NE52 1622 aa14.84□□□□□ -0.03
NUMB-212ENST00000554546 TPM2P07951 284 aa14.84□□□□□ -0.03
NUMB-212ENST00000554546 ZNF326Q5BKZ1 582 aaKnown RBP14.84□□□□□ -0.03
NUMB-212ENST00000554546 CCDC184Q52MB2 194 aa14.83□□□□□ -0.04
NUMB-212ENST00000554546 DHX37Q8IY37 1157 aaKnown RBP14.82□□□□□ -0.04
NUMB-212ENST00000554546 ARID3AQ99856 593 aa14.81□□□□□ -0.04
NUMB-212ENST00000554546 ZBED9Q6R2W3 1325 aa14.81□□□□□ -0.04
NUMB-212ENST00000554546 NCAPD3P42695 1498 aa14.8□□□□□ -0.04
NUMB-212ENST00000554546 PRDM10Q9NQV6 1147 aa14.8□□□□□ -0.04
NUMB-212ENST00000554546 VGLL3A8MV65 326 aa14.79□□□□□ -0.04
NUMB-212ENST00000554546 PANK2Q9BZ23 570 aa14.78□□□□□ -0.04
NUMB-212ENST00000554546 XRCC6P12956 609 aaKnown RBP eCLIP14.78□□□□□ -0.04
NUMB-212ENST00000554546 MS4A1P11836 297 aa14.77□□□□□ -0.05
NUMB-212ENST00000554546 NCBP3Q53F19 620 aaKnown RBP14.76□□□□□ -0.05
NUMB-212ENST00000554546 SMAP1Q8IYB5 467 aaPredicted RBP14.76□□□□□ -0.05
NUMB-212ENST00000554546 NCLP19338 710 aaKnown RBP14.75□□□□□ -0.05
NUMB-212ENST00000554546 FAM13BQ9NYF5 915 aa14.75□□□□□ -0.05
NUMB-212ENST00000554546 ESPNB1AK53 854 aa14.74□□□□□ -0.05
NUMB-212ENST00000554546 ZNF830Q96NB3 372 aaPredicted RBP14.74□□□□□ -0.05
NUMB-212ENST00000554546 MRS2Q9HD23 443 aa14.74□□□□□ -0.05
NUMB-212ENST00000554546 KIAA1211Q6ZU35 1233 aa14.74□□□□□ -0.05
NUMB-212ENST00000554546 GOLGA6L3A6NEY3 463 aa14.73□□□□□ -0.05
NUMB-212ENST00000554546 ZFP91Q96JP5 570 aaPredicted RBP14.73□□□□□ -0.05
NUMB-212ENST00000554546 AMER1Q5JTC6 1135 aaPredicted RBP14.73□□□□□ -0.05
NUMB-212ENST00000554546 ABCC9O60706 1549 aa14.72□□□□□ -0.05
NUMB-212ENST00000554546 SKAP1Q86WV1 359 aa14.72□□□□□ -0.05
NUMB-212ENST00000554546 SENP3-EIF4A1A0A087X0R7 540 aa14.71□□□□□ -0.05
NUMB-212ENST00000554546 TMEM51Q9NW97 253 aa14.71□□□□□ -0.05
NUMB-212ENST00000554546 CLIP1P30622 1438 aa14.7□□□□□ -0.06
NUMB-212ENST00000554546 NUDCQ9Y266 331 aa14.7□□□□□ -0.06
NUMB-212ENST00000554546 SOGA1O94964 1423 aa14.7□□□□□ -0.06
NUMB-212ENST00000554546 ERBB4Q15303 1308 aa14.7□□□□□ -0.06
NUMB-212ENST00000554546 FTSJ3Q8IY81 847 aaKnown RBP14.69□□□□□ -0.06
NUMB-212ENST00000554546 ANP32BQ92688 251 aaKnown RBP14.69□□□□□ -0.06
NUMB-212ENST00000554546 ABCC8Q09428 1581 aa14.69□□□□□ -0.06
NUMB-212ENST00000554546 PPP4R3BQ5MIZ7 849 aa14.68□□□□□ -0.06
NUMB-212ENST00000554546 EXOC6Q8TAG9 804 aa14.68□□□□□ -0.06
NUMB-212ENST00000554546 RNF123Q5XPI4 1314 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms