RNA–Protein interactions for RNA: ENST00000554534.5

PCNX4-208, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 357 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-208ENST00000554534 FAM69CQ0P6D2 419 aa11.97□□□□□ -0.49
PCNX4-208ENST00000554534 ERICH3Q5RHP9 1530 aa11.92□□□□□ -0.5
PCNX4-208ENST00000554534 TSPOAP1O95153 1857 aa11.92□□□□□ -0.5
PCNX4-208ENST00000554534 NPM1P06748 294 aaKnown RBP eCLIP11.92□□□□□ -0.5
PCNX4-208ENST00000554534 RUSC2Q8N2Y8 1516 aa11.87□□□□□ -0.51
PCNX4-208ENST00000554534 ADCY10Q96PN6 1610 aa11.86□□□□□ -0.51
PCNX4-208ENST00000554534 KDM4FA0A1W2PPD8 638 aa11.86□□□□□ -0.51
PCNX4-208ENST00000554534 ABCC10Q5T3U5 1492 aa11.85□□□□□ -0.51
PCNX4-208ENST00000554534 IGF1RP08069 1367 aa11.85□□□□□ -0.51
PCNX4-208ENST00000554534 DIP2BQ9P265 1576 aa11.83□□□□□ -0.52
PCNX4-208ENST00000554534 KIAA0586Q9BVV6 1533 aa11.79□□□□□ -0.52
PCNX4-208ENST00000554534 KDM6BO15054 1643 aa11.78□□□□□ -0.52
PCNX4-208ENST00000554534 PTPRGP23470 1445 aa11.78□□□□□ -0.52
PCNX4-208ENST00000554534 MAPKBP1O60336 1514 aa11.77□□□□□ -0.52
PCNX4-208ENST00000554534 KIF27Q86VH2 1401 aa11.77□□□□□ -0.53
PCNX4-208ENST00000554534 CARMIL1Q5VZK9 1371 aa11.76□□□□□ -0.53
PCNX4-208ENST00000554534 CUL7Q14999 1698 aa11.73□□□□□ -0.53
PCNX4-208ENST00000554534 ASXL2Q76L83 1435 aa11.71□□□□□ -0.53
PCNX4-208ENST00000554534 TNIKQ9UKE5 1360 aa11.7□□□□□ -0.54
PCNX4-208ENST00000554534 ILDR1Q86SU0 546 aaPredicted RBP11.7□□□□□ -0.54
PCNX4-208ENST00000554534 PPRC1Q5VV67 1664 aaKnown RBP11.7□□□□□ -0.54
PCNX4-208ENST00000554534 COL17A1Q9UMD9 1497 aaPredicted RBP11.69□□□□□ -0.54
PCNX4-208ENST00000554534 ABCC2Q92887 1545 aa11.68□□□□□ -0.54
PCNX4-208ENST00000554534 CARMIL2Q6F5E8 1435 aa11.68□□□□□ -0.54
PCNX4-208ENST00000554534 ARID3CA6NKF2 412 aa11.67□□□□□ -0.54
PCNX4-208ENST00000554534 KCNH8Q96L42 1107 aa11.67□□□□□ -0.54
PCNX4-208ENST00000554534 IQGAP2Q13576 1575 aa11.67□□□□□ -0.54
PCNX4-208ENST00000554534 DISP1Q96F81 1524 aa11.66□□□□□ -0.54
PCNX4-208ENST00000554534 UACAQ9BZF9 1416 aa11.65□□□□□ -0.54
PCNX4-208ENST00000554534 ADGRL1O94910 1474 aa11.64□□□□□ -0.55
PCNX4-208ENST00000554534 PLB1Q6P1J6 1458 aa11.63□□□□□ -0.55
PCNX4-208ENST00000554534 EPRSP07814 1512 aaKnown RBP11.62□□□□□ -0.55
PCNX4-208ENST00000554534 ZCCHC11Q5TAX3 1644 aaKnown RBP11.62□□□□□ -0.55
PCNX4-208ENST00000554534 P3H3Q8IVL6 736 aa11.62□□□□□ -0.55
PCNX4-208ENST00000554534 GLI2P10070 1586 aa11.6□□□□□ -0.55
PCNX4-208ENST00000554534 UHRF1BP1LA0JNW5 1464 aa11.59□□□□□ -0.55
PCNX4-208ENST00000554534 RAPGEF2Q9Y4G8 1499 aa11.59□□□□□ -0.55
PCNX4-208ENST00000554534 MAP3K4Q9Y6R4 1608 aa11.58□□□□□ -0.56
PCNX4-208ENST00000554534 KDM5BQ9UGL1 1544 aa11.58□□□□□ -0.56
PCNX4-208ENST00000554534 KIAA0556O60303 1618 aa11.57□□□□□ -0.56
PCNX4-208ENST00000554534 RANGAP1P46060 587 aaPredicted RBP11.57□□□□□ -0.56
PCNX4-208ENST00000554534 UGGT2Q9NYU1 1516 aa11.55□□□□□ -0.56
PCNX4-208ENST00000554534 HECW2Q9P2P5 1572 aa11.54□□□□□ -0.56
PCNX4-208ENST00000554534 CD109Q6YHK3 1445 aa11.52□□□□□ -0.56
PCNX4-208ENST00000554534 WDR7Q9Y4E6 1490 aa11.52□□□□□ -0.56
PCNX4-208ENST00000554534 CTTNBP2Q8WZ74 1663 aa11.51□□□□□ -0.57
PCNX4-208ENST00000554534 TEX14Q8IWB6 1497 aa11.51□□□□□ -0.57
PCNX4-208ENST00000554534 PLPPR3Q6T4P5 718 aa11.49□□□□□ -0.57
PCNX4-208ENST00000554534 KIF21BO75037 1637 aa11.49□□□□□ -0.57
PCNX4-208ENST00000554534 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.48□□□□□ -0.57
PCNX4-208ENST00000554534 HNRNPUL2Q1KMD3 747 aaKnown RBP11.48□□□□□ -0.57
PCNX4-208ENST00000554534 ABCA8O94911 1581 aa11.47□□□□□ -0.57
PCNX4-208ENST00000554534 RAPGEF3O95398 923 aa11.47□□□□□ -0.57
PCNX4-208ENST00000554534 EHMT2Q96KQ7 1210 aa11.47□□□□□ -0.57
PCNX4-208ENST00000554534 CHIC1Q5VXU3 224 aa11.46□□□□□ -0.57
PCNX4-208ENST00000554534 FAM9AQ8IZU1 332 aaPredicted RBP11.45□□□□□ -0.58
PCNX4-208ENST00000554534 CFAP43Q8NDM7 1665 aa11.45□□□□□ -0.58
PCNX4-208ENST00000554534 ATP10BO94823 1461 aa11.44□□□□□ -0.58
PCNX4-208ENST00000554534 MAGI3Q5TCQ9 1506 aa11.43□□□□□ -0.58
PCNX4-208ENST00000554534 GOLGA3Q08378 1498 aa11.43□□□□□ -0.58
PCNX4-208ENST00000554534 ARID4BQ4LE39 1312 aaPredicted RBP11.41□□□□□ -0.58
PCNX4-208ENST00000554534 PRXQ9BXM0 1461 aa11.41□□□□□ -0.58
PCNX4-208ENST00000554534 CSRNP3Q8WYN3 585 aa11.38□□□□□ -0.59
PCNX4-208ENST00000554534 ARAP3Q8WWN8 1544 aa11.35□□□□□ -0.59
PCNX4-208ENST00000554534 HSPA2P54652 639 aa11.35□□□□□ -0.59
PCNX4-208ENST00000554534 MLECQ14165 292 aa11.35□□□□□ -0.59
PCNX4-208ENST00000554534 PTPRMP28827 1452 aa11.35□□□□□ -0.59
PCNX4-208ENST00000554534 FHOD3Q2V2M9 1422 aa11.35□□□□□ -0.59
PCNX4-208ENST00000554534 RAPGEF6Q8TEU7 1601 aa11.34□□□□□ -0.59
PCNX4-208ENST00000554534 ATP1B4Q9UN42 357 aaPredicted RBP11.33□□□□□ -0.6
PCNX4-208ENST00000554534 ABCA9Q8IUA7 1624 aa11.33□□□□□ -0.6
PCNX4-208ENST00000554534 ADAMTSL3P82987 1691 aa11.33□□□□□ -0.6
PCNX4-208ENST00000554534 MADDQ8WXG6 1647 aa11.32□□□□□ -0.6
PCNX4-208ENST00000554534 FBXO41Q8TF61 875 aa11.31□□□□□ -0.6
PCNX4-208ENST00000554534 SAMD9Q5K651 1589 aa11.31□□□□□ -0.6
PCNX4-208ENST00000554534 FRMPD1Q5SYB0 1578 aa11.31□□□□□ -0.6
PCNX4-208ENST00000554534 NUP153P49790 1475 aaKnown RBP11.31□□□□□ -0.6
PCNX4-208ENST00000554534 RIMS1Q86UR5 1692 aaKnown RBP11.3□□□□□ -0.6
PCNX4-208ENST00000554534 PLEKHD1A6NEE1 506 aa11.3□□□□□ -0.6
PCNX4-208ENST00000554534 BCORL1Q5H9F3 1711 aa11.29□□□□□ -0.6
PCNX4-208ENST00000554534 SIGLEC1Q9BZZ2 1709 aa11.29□□□□□ -0.6
PCNX4-208ENST00000554534 AKNAQ7Z591 1439 aa11.26□□□□□ -0.61
PCNX4-208ENST00000554534 YEATS2Q9ULM3 1422 aa11.26□□□□□ -0.61
PCNX4-208ENST00000554534 NEO1Q92859 1461 aa11.26□□□□□ -0.61
PCNX4-208ENST00000554534 CEBPAP49715 358 aaPredicted RBP11.26□□□□□ -0.61
PCNX4-208ENST00000554534 CDK13Q14004 1512 aaKnown RBP11.25□□□□□ -0.61
PCNX4-208ENST00000554534 DENND4BO75064 1496 aaPredicted RBP11.25□□□□□ -0.61
PCNX4-208ENST00000554534 LMTK3Q96Q04 1460 aa11.25□□□□□ -0.61
PCNX4-208ENST00000554534 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.25□□□□□ -0.61
PCNX4-208ENST00000554534 TTC37Q6PGP7 1564 aa11.24□□□□□ -0.61
PCNX4-208ENST00000554534 RICTORQ6R327 1708 aa11.24□□□□□ -0.61
PCNX4-208ENST00000554534 PHLDB1Q86UU1 1377 aa11.24□□□□□ -0.61
PCNX4-208ENST00000554534 FANCAO15360 1455 aa11.23□□□□□ -0.61
PCNX4-208ENST00000554534 PCF11O94913 1555 aaKnown RBP11.23□□□□□ -0.61
PCNX4-208ENST00000554534 UBTFP17480 764 aaKnown RBP11.22□□□□□ -0.61
PCNX4-208ENST00000554534 MYT1LQ9UL68 1186 aa11.21□□□□□ -0.61
PCNX4-208ENST00000554534 ARHGEF40Q8TER5 1519 aa11.2□□□□□ -0.62
PCNX4-208ENST00000554534 SCAPERQ9BY12 1400 aa11.2□□□□□ -0.62
PCNX4-208ENST00000554534 HECW1Q76N89 1606 aa11.2□□□□□ -0.62
PCNX4-208ENST00000554534 AFAP1Q8N556 730 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms