RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 LRRIQ1Q96JM4 1722 aa11.27□□□□□ -0.6
LINC00517-202ENST00000554257 TNIKQ9UKE5 1360 aa11.26□□□□□ -0.61
LINC00517-202ENST00000554257 KIAA0586Q9BVV6 1533 aa11.26□□□□□ -0.61
LINC00517-202ENST00000554257 KIAA0556O60303 1618 aa11.25□□□□□ -0.61
LINC00517-202ENST00000554257 DISP1Q96F81 1524 aa11.24□□□□□ -0.61
LINC00517-202ENST00000554257 EFCAB5A4FU69 1503 aa11.23□□□□□ -0.61
LINC00517-202ENST00000554257 ERCC6L2Q5T890 1561 aa11.23□□□□□ -0.61
LINC00517-202ENST00000554257 FAM9AQ8IZU1 332 aaPredicted RBP11.22□□□□□ -0.61
LINC00517-202ENST00000554257 ARHGAP35Q9NRY4 1499 aa11.21□□□□□ -0.62
LINC00517-202ENST00000554257 ARAP1Q96P48 1450 aa11.21□□□□□ -0.62
LINC00517-202ENST00000554257 LOC105371045A0A1W2PR82 267 aa11.19□□□□□ -0.62
LINC00517-202ENST00000554257 CEP162Q5TB80 1403 aa11.17□□□□□ -0.62
LINC00517-202ENST00000554257 RIMBP3CA6NJZ7 1639 aa11.14□□□□□ -0.63
LINC00517-202ENST00000554257 RIMBP3BA6NNM3 1639 aa11.14□□□□□ -0.63
LINC00517-202ENST00000554257 RIMBP3Q9UFD9 1639 aa11.14□□□□□ -0.63
LINC00517-202ENST00000554257 CFAP43Q8NDM7 1665 aa11.13□□□□□ -0.63
LINC00517-202ENST00000554257 ABCA8O94911 1581 aa11.12□□□□□ -0.63
LINC00517-202ENST00000554257 PCF11O94913 1555 aaKnown RBP11.12□□□□□ -0.63
LINC00517-202ENST00000554257 CHMP7Q8WUX9 453 aaPredicted RBP11.12□□□□□ -0.63
LINC00517-202ENST00000554257 CLIP1P30622 1438 aa11.09□□□□□ -0.63
LINC00517-202ENST00000554257 RAPGEF6Q8TEU7 1601 aa11.09□□□□□ -0.63
LINC00517-202ENST00000554257 ADCY10Q96PN6 1610 aa11.08□□□□□ -0.64
LINC00517-202ENST00000554257 ARHGEF11O15085 1522 aa11.08□□□□□ -0.64
LINC00517-202ENST00000554257 PRG4Q92954 1404 aaPredicted RBP11.06□□□□□ -0.64
LINC00517-202ENST00000554257 FHOD3Q2V2M9 1422 aa11.05□□□□□ -0.64
LINC00517-202ENST00000554257 HECW1Q76N89 1606 aa11.03□□□□□ -0.64
LINC00517-202ENST00000554257 FYCO1Q9BQS8 1478 aa11.03□□□□□ -0.64
LINC00517-202ENST00000554257 VPS8Q8N3P4 1428 aa11.03□□□□□ -0.64
LINC00517-202ENST00000554257 JPH4Q96JJ6 628 aa11.03□□□□□ -0.64
LINC00517-202ENST00000554257 UHRF1BP1LA0JNW5 1464 aa11.02□□□□□ -0.64
LINC00517-202ENST00000554257 ZCCHC11Q5TAX3 1644 aaKnown RBP11.02□□□□□ -0.65
LINC00517-202ENST00000554257 MAP3K1Q13233 1512 aa11.02□□□□□ -0.65
LINC00517-202ENST00000554257 FBLN2P98095 1184 aa11.01□□□□□ -0.65
LINC00517-202ENST00000554257 OSCARQ8IYS5 282 aa11.01□□□□□ -0.65
LINC00517-202ENST00000554257 NUP153P49790 1475 aaKnown RBP11.01□□□□□ -0.65
LINC00517-202ENST00000554257 CASKIN1Q8WXD9 1431 aa11.01□□□□□ -0.65
LINC00517-202ENST00000554257 UBTFP17480 764 aaKnown RBP11.01□□□□□ -0.65
LINC00517-202ENST00000554257 ABCC2Q92887 1545 aa11.01□□□□□ -0.65
LINC00517-202ENST00000554257 MAGI3Q5TCQ9 1506 aa11□□□□□ -0.65
LINC00517-202ENST00000554257 TIAM1Q13009 1591 aa11□□□□□ -0.65
LINC00517-202ENST00000554257 EHMT2Q96KQ7 1210 aa10.99□□□□□ -0.65
LINC00517-202ENST00000554257 PLB1Q6P1J6 1458 aa10.99□□□□□ -0.65
LINC00517-202ENST00000554257 CARMIL2Q6F5E8 1435 aa10.98□□□□□ -0.65
LINC00517-202ENST00000554257 FMN1Q68DA7 1419 aa10.97□□□□□ -0.65
LINC00517-202ENST00000554257 KDM5BQ9UGL1 1544 aa10.96□□□□□ -0.65
LINC00517-202ENST00000554257 EPRSP07814 1512 aaKnown RBP10.95□□□□□ -0.66
LINC00517-202ENST00000554257 CDK13Q14004 1512 aaKnown RBP10.94□□□□□ -0.66
LINC00517-202ENST00000554257 UACAQ9BZF9 1416 aa10.92□□□□□ -0.66
LINC00517-202ENST00000554257 CCDC18Q5T9S5 1454 aa10.92□□□□□ -0.66
LINC00517-202ENST00000554257 KIF13AQ9H1H9 1805 aa10.91□□□□□ -0.66
LINC00517-202ENST00000554257 ATP10BO94823 1461 aa10.91□□□□□ -0.66
LINC00517-202ENST00000554257 KIF14Q15058 1648 aa10.9□□□□□ -0.66
LINC00517-202ENST00000554257 PTPRGP23470 1445 aa10.9□□□□□ -0.66
LINC00517-202ENST00000554257 CDC42BPAQ5VT25 1732 aa10.9□□□□□ -0.66
LINC00517-202ENST00000554257 MAPKBP1O60336 1514 aa10.9□□□□□ -0.66
LINC00517-202ENST00000554257 EHBP1L1Q8N3D4 1523 aa10.88□□□□□ -0.67
LINC00517-202ENST00000554257 PPRC1Q5VV67 1664 aaKnown RBP10.88□□□□□ -0.67
LINC00517-202ENST00000554257 CDC42BPBQ9Y5S2 1711 aa10.87□□□□□ -0.67
LINC00517-202ENST00000554257 LRRC9Q6ZRR7 1453 aa10.87□□□□□ -0.67
LINC00517-202ENST00000554257 P3H3Q8IVL6 736 aa10.87□□□□□ -0.67
LINC00517-202ENST00000554257 SUPT6HQ7KZ85 1726 aaKnown RBP10.87□□□□□ -0.67
LINC00517-202ENST00000554257 ABCA9Q8IUA7 1624 aa10.86□□□□□ -0.67
LINC00517-202ENST00000554257 MAP3K4Q9Y6R4 1608 aa10.86□□□□□ -0.67
LINC00517-202ENST00000554257 TTC37Q6PGP7 1564 aa10.85□□□□□ -0.67
LINC00517-202ENST00000554257 ABCC10Q5T3U5 1492 aa10.85□□□□□ -0.67
LINC00517-202ENST00000554257 PREX2Q70Z35 1606 aa10.84□□□□□ -0.67
LINC00517-202ENST00000554257 MYO5CQ9NQX4 1742 aa10.83□□□□□ -0.68
LINC00517-202ENST00000554257 GLI2P10070 1586 aa10.83□□□□□ -0.68
LINC00517-202ENST00000554257 DIP2BQ9P265 1576 aa10.83□□□□□ -0.68
LINC00517-202ENST00000554257 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.83□□□□□ -0.68
LINC00517-202ENST00000554257 RANGAP1P46060 587 aaPredicted RBP10.82□□□□□ -0.68
LINC00517-202ENST00000554257 ITSN2Q9NZM3 1697 aa10.82□□□□□ -0.68
LINC00517-202ENST00000554257 DNAJC5Q9H3Z4 198 aa10.81□□□□□ -0.68
LINC00517-202ENST00000554257 CROCC2H7BZ55 1655 aa10.79□□□□□ -0.68
LINC00517-202ENST00000554257 WDR7Q9Y4E6 1490 aa10.79□□□□□ -0.68
LINC00517-202ENST00000554257 TROQ12816 1431 aaPredicted RBP10.79□□□□□ -0.68
LINC00517-202ENST00000554257 KANK4Q5T7N3 995 aaPredicted RBP10.78□□□□□ -0.68
LINC00517-202ENST00000554257 ARAP3Q8WWN8 1544 aa10.77□□□□□ -0.68
LINC00517-202ENST00000554257 ASXL2Q76L83 1435 aa10.76□□□□□ -0.69
LINC00517-202ENST00000554257 NCOA2Q15596 1464 aa10.76□□□□□ -0.69
LINC00517-202ENST00000554257 SAMD9LQ8IVG5 1584 aa10.74□□□□□ -0.69
LINC00517-202ENST00000554257 TCOF1Q13428 1488 aaKnown RBP10.74□□□□□ -0.69
LINC00517-202ENST00000554257 PTPN23Q9H3S7 1636 aa10.73□□□□□ -0.69
LINC00517-202ENST00000554257 RRBP1Q9P2E9 1410 aaKnown RBP10.73□□□□□ -0.69
LINC00517-202ENST00000554257 PHLDB1Q86UU1 1377 aa10.72□□□□□ -0.69
LINC00517-202ENST00000554257 GPATCH8Q9UKJ3 1502 aaKnown RBP10.72□□□□□ -0.69
LINC00517-202ENST00000554257 RICTORQ6R327 1708 aa10.7□□□□□ -0.7
LINC00517-202ENST00000554257 CFAP74Q9C0B2 1584 aa10.7□□□□□ -0.7
LINC00517-202ENST00000554257 DNMT1P26358 1616 aaKnown RBP10.69□□□□□ -0.7
LINC00517-202ENST00000554257 FRMPD1Q5SYB0 1578 aa10.69□□□□□ -0.7
LINC00517-202ENST00000554257 ABCC1P33527 1531 aa10.68□□□□□ -0.7
LINC00517-202ENST00000554257 ADGBQ8N7X0 1667 aa10.68□□□□□ -0.7
LINC00517-202ENST00000554257 MYOM3Q5VTT5 1437 aa10.68□□□□□ -0.7
LINC00517-202ENST00000554257 ARHGEF5Q12774 1597 aa10.68□□□□□ -0.7
LINC00517-202ENST00000554257 TSPOAP1O95153 1857 aa10.67□□□□□ -0.7
LINC00517-202ENST00000554257 CYB5RLQ6IPT4 315 aa10.67□□□□□ -0.7
LINC00517-202ENST00000554257 MAST1Q9Y2H9 1570 aa10.66□□□□□ -0.7
LINC00517-202ENST00000554257 MIA2Q96PC5 1412 aa10.66□□□□□ -0.7
LINC00517-202ENST00000554257 FGD6Q6ZV73 1430 aa10.66□□□□□ -0.7
LINC00517-202ENST00000554257 ARHGEF12Q9NZN5 1544 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms