RNA–Protein interactions for RNA: ENST00000554170.1

XRCC3-206, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-206ENST00000554170 JPH4Q96JJ6 628 aa22.25■■□□□ 1.15
XRCC3-206ENST00000554170 MAPKBP1O60336 1514 aa22.16■■□□□ 1.14
XRCC3-206ENST00000554170 ABCC10Q5T3U5 1492 aa22.15■■□□□ 1.14
XRCC3-206ENST00000554170 ADCY10Q96PN6 1610 aa22.15■■□□□ 1.14
XRCC3-206ENST00000554170 DIP2BQ9P265 1576 aa22.12■■□□□ 1.13
XRCC3-206ENST00000554170 FAM69CQ0P6D2 419 aa22.11■■□□□ 1.13
XRCC3-206ENST00000554170 NPM1P06748 294 aaKnown RBP eCLIP22.1■■□□□ 1.13
XRCC3-206ENST00000554170 KIAA0586Q9BVV6 1533 aa22.09■■□□□ 1.13
XRCC3-206ENST00000554170 CUL7Q14999 1698 aa22.08■■□□□ 1.13
XRCC3-206ENST00000554170 IGF1RP08069 1367 aa22.03■■□□□ 1.12
XRCC3-206ENST00000554170 KIF27Q86VH2 1401 aa22.03■■□□□ 1.12
XRCC3-206ENST00000554170 TSPOAP1O95153 1857 aa22.03■■□□□ 1.12
XRCC3-206ENST00000554170 KDM6BO15054 1643 aa22■■□□□ 1.11
XRCC3-206ENST00000554170 PTPRGP23470 1445 aa21.91■■□□□ 1.1
XRCC3-206ENST00000554170 CARMIL1Q5VZK9 1371 aa21.88■■□□□ 1.09
XRCC3-206ENST00000554170 ABCC2Q92887 1545 aa21.86■■□□□ 1.09
XRCC3-206ENST00000554170 KDM4FA0A1W2PPD8 638 aa21.86■■□□□ 1.09
XRCC3-206ENST00000554170 CARMIL2Q6F5E8 1435 aa21.86■■□□□ 1.09
XRCC3-206ENST00000554170 IQGAP2Q13576 1575 aa21.86■■□□□ 1.09
XRCC3-206ENST00000554170 TNIKQ9UKE5 1360 aa21.86■■□□□ 1.09
XRCC3-206ENST00000554170 PPRC1Q5VV67 1664 aaKnown RBP21.83■■□□□ 1.09
XRCC3-206ENST00000554170 TTBK1Q5TCY1 1321 aaPredicted RBP21.82■■□□□ 1.08
XRCC3-206ENST00000554170 ASXL2Q76L83 1435 aa21.81■■□□□ 1.08
XRCC3-206ENST00000554170 GLI2P10070 1586 aa21.81■■□□□ 1.08
XRCC3-206ENST00000554170 UHRF1BP1LA0JNW5 1464 aa21.8■■□□□ 1.08
XRCC3-206ENST00000554170 PLB1Q6P1J6 1458 aa21.8■■□□□ 1.08
XRCC3-206ENST00000554170 DISP1Q96F81 1524 aa21.76■■□□□ 1.07
XRCC3-206ENST00000554170 UACAQ9BZF9 1416 aa21.75■■□□□ 1.07
XRCC3-206ENST00000554170 MAP3K4Q9Y6R4 1608 aa21.71■■□□□ 1.07
XRCC3-206ENST00000554170 UGGT2Q9NYU1 1516 aa21.7■■□□□ 1.07
XRCC3-206ENST00000554170 KDM5BQ9UGL1 1544 aa21.7■■□□□ 1.07
XRCC3-206ENST00000554170 EPRSP07814 1512 aaKnown RBP21.69■■□□□ 1.06
XRCC3-206ENST00000554170 ZCCHC11Q5TAX3 1644 aaKnown RBP21.69■■□□□ 1.06
XRCC3-206ENST00000554170 KIAA0556O60303 1618 aa21.67■■□□□ 1.06
XRCC3-206ENST00000554170 RAPGEF2Q9Y4G8 1499 aa21.67■■□□□ 1.06
XRCC3-206ENST00000554170 ADGRL1O94910 1474 aa21.64■■□□□ 1.06
XRCC3-206ENST00000554170 COL17A1Q9UMD9 1497 aaPredicted RBP21.64■■□□□ 1.05
XRCC3-206ENST00000554170 TEX14Q8IWB6 1497 aa21.63■■□□□ 1.05
XRCC3-206ENST00000554170 CTTNBP2Q8WZ74 1663 aa21.6■■□□□ 1.05
XRCC3-206ENST00000554170 WDR7Q9Y4E6 1490 aa21.57■■□□□ 1.04
XRCC3-206ENST00000554170 CFAP43Q8NDM7 1665 aa21.5■■□□□ 1.03
XRCC3-206ENST00000554170 CHIC1Q5VXU3 224 aa21.5■■□□□ 1.03
XRCC3-206ENST00000554170 ABCA8O94911 1581 aa21.48■■□□□ 1.03
XRCC3-206ENST00000554170 GOLGA3Q08378 1498 aa21.48■■□□□ 1.03
XRCC3-206ENST00000554170 ILDR1Q86SU0 546 aaPredicted RBP21.47■■□□□ 1.03
XRCC3-206ENST00000554170 HECW2Q9P2P5 1572 aa21.47■■□□□ 1.03
XRCC3-206ENST00000554170 MAGI3Q5TCQ9 1506 aa21.46■■□□□ 1.03
XRCC3-206ENST00000554170 CD109Q6YHK3 1445 aa21.44■■□□□ 1.02
XRCC3-206ENST00000554170 PRXQ9BXM0 1461 aa21.39■■□□□ 1.01
XRCC3-206ENST00000554170 KCNH8Q96L42 1107 aa21.38■■□□□ 1.01
XRCC3-206ENST00000554170 EEA1Q15075 1411 aa21.36■■□□□ 1.01
XRCC3-206ENST00000554170 KIF21BO75037 1637 aa21.35■■□□□ 1.01
XRCC3-206ENST00000554170 CSRNP3Q8WYN3 585 aa21.34■■□□□ 1.01
XRCC3-206ENST00000554170 ARAP3Q8WWN8 1544 aa21.31■■□□□ 1
XRCC3-206ENST00000554170 FAM9AQ8IZU1 332 aaPredicted RBP21.29■■□□□ 1
XRCC3-206ENST00000554170 ATP10BO94823 1461 aa21.27■■□□□ 1
XRCC3-206ENST00000554170 ABCA9Q8IUA7 1624 aa21.27■■□□□ 1
XRCC3-206ENST00000554170 ARID3CA6NKF2 412 aa21.24■□□□□ 0.99
XRCC3-206ENST00000554170 SAMD9Q5K651 1589 aa21.23■□□□□ 0.99
XRCC3-206ENST00000554170 P3H3Q8IVL6 736 aa21.21■□□□□ 0.99
XRCC3-206ENST00000554170 RAPGEF6Q8TEU7 1601 aa21.21■□□□□ 0.99
XRCC3-206ENST00000554170 PHLDB1Q86UU1 1377 aa21.21■□□□□ 0.99
XRCC3-206ENST00000554170 ADAMTSL3P82987 1691 aa21.19■□□□□ 0.98
XRCC3-206ENST00000554170 NEO1Q92859 1461 aa21.16■□□□□ 0.98
XRCC3-206ENST00000554170 FRMPD1Q5SYB0 1578 aa21.14■□□□□ 0.97
XRCC3-206ENST00000554170 PTPRMP28827 1452 aa21.13■□□□□ 0.97
XRCC3-206ENST00000554170 BCORL1Q5H9F3 1711 aa21.12■□□□□ 0.97
XRCC3-206ENST00000554170 RAPGEF3O95398 923 aa21.12■□□□□ 0.97
XRCC3-206ENST00000554170 NUP153P49790 1475 aaKnown RBP21.11■□□□□ 0.97
XRCC3-206ENST00000554170 MADDQ8WXG6 1647 aa21.07■□□□□ 0.96
XRCC3-206ENST00000554170 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.07■□□□□ 0.96
XRCC3-206ENST00000554170 HNRNPUL2Q1KMD3 747 aaKnown RBP21.07■□□□□ 0.96
XRCC3-206ENST00000554170 RICTORQ6R327 1708 aa21.06■□□□□ 0.96
XRCC3-206ENST00000554170 ARHGEF40Q8TER5 1519 aa21.04■□□□□ 0.96
XRCC3-206ENST00000554170 FHOD3Q2V2M9 1422 aa21.04■□□□□ 0.96
XRCC3-206ENST00000554170 PCF11O94913 1555 aaKnown RBP21.02■□□□□ 0.96
XRCC3-206ENST00000554170 CFAP74Q9C0B2 1584 aa21.02■□□□□ 0.96
XRCC3-206ENST00000554170 FBXO41Q8TF61 875 aa21.01■□□□□ 0.95
XRCC3-206ENST00000554170 EHMT2Q96KQ7 1210 aa21.01■□□□□ 0.95
XRCC3-206ENST00000554170 ARID4BQ4LE39 1312 aaPredicted RBP21.01■□□□□ 0.95
XRCC3-206ENST00000554170 RIMS1Q86UR5 1692 aaKnown RBP21■□□□□ 0.95
XRCC3-206ENST00000554170 UBTFP17480 764 aaKnown RBP21■□□□□ 0.95
XRCC3-206ENST00000554170 DENND4BO75064 1496 aaPredicted RBP20.99■□□□□ 0.95
XRCC3-206ENST00000554170 LMTK3Q96Q04 1460 aa20.99■□□□□ 0.95
XRCC3-206ENST00000554170 FANCAO15360 1455 aa20.98■□□□□ 0.95
XRCC3-206ENST00000554170 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.98■□□□□ 0.95
XRCC3-206ENST00000554170 AKNAQ7Z591 1439 aa20.97■□□□□ 0.95
XRCC3-206ENST00000554170 PLEKHD1A6NEE1 506 aa20.97■□□□□ 0.95
XRCC3-206ENST00000554170 RANGAP1P46060 587 aaPredicted RBP20.97■□□□□ 0.95
XRCC3-206ENST00000554170 TTC37Q6PGP7 1564 aa20.96■□□□□ 0.95
XRCC3-206ENST00000554170 EFCAB5A4FU69 1503 aa20.95■□□□□ 0.94
XRCC3-206ENST00000554170 ZMYM4Q5VZL5 1548 aa20.95■□□□□ 0.94
XRCC3-206ENST00000554170 SIGLEC1Q9BZZ2 1709 aa20.92■□□□□ 0.94
XRCC3-206ENST00000554170 ZFYVE16Q7Z3T8 1539 aa20.9■□□□□ 0.94
XRCC3-206ENST00000554170 POGZQ7Z3K3 1410 aa20.89■□□□□ 0.94
XRCC3-206ENST00000554170 MAGI2Q86UL8 1455 aa20.88■□□□□ 0.93
XRCC3-206ENST00000554170 YEATS2Q9ULM3 1422 aa20.87■□□□□ 0.93
XRCC3-206ENST00000554170 CDK13Q14004 1512 aaKnown RBP20.87■□□□□ 0.93
XRCC3-206ENST00000554170 FER1L4A9Z1Z3 1794 aa20.87■□□□□ 0.93
XRCC3-206ENST00000554170 HECW1Q76N89 1606 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms