RNA–Protein interactions for RNA: ENST00000554057.5

MTHFD1-205, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-205ENST00000554057 JPH4Q96JJ6 628 aa12.15□□□□□ -0.46
MTHFD1-205ENST00000554057 ADCY10Q96PN6 1610 aa12.12□□□□□ -0.47
MTHFD1-205ENST00000554057 ABCC10Q5T3U5 1492 aa12.12□□□□□ -0.47
MTHFD1-205ENST00000554057 DIP2BQ9P265 1576 aa12.11□□□□□ -0.47
MTHFD1-205ENST00000554057 FAM69CQ0P6D2 419 aa12.11□□□□□ -0.47
MTHFD1-205ENST00000554057 MAPKBP1O60336 1514 aa12.11□□□□□ -0.47
MTHFD1-205ENST00000554057 NPM1P06748 294 aaKnown RBP eCLIP12.07□□□□□ -0.48
MTHFD1-205ENST00000554057 KIAA0586Q9BVV6 1533 aa12.06□□□□□ -0.48
MTHFD1-205ENST00000554057 CUL7Q14999 1698 aa12.06□□□□□ -0.48
MTHFD1-205ENST00000554057 KDM6BO15054 1643 aa12.04□□□□□ -0.48
MTHFD1-205ENST00000554057 KIF27Q86VH2 1401 aa12.04□□□□□ -0.48
MTHFD1-205ENST00000554057 TSPOAP1O95153 1857 aa12.04□□□□□ -0.48
MTHFD1-205ENST00000554057 IGF1RP08069 1367 aa12.04□□□□□ -0.48
MTHFD1-205ENST00000554057 TTBK1Q5TCY1 1321 aaPredicted RBP12.01□□□□□ -0.49
MTHFD1-205ENST00000554057 PTPRGP23470 1445 aa11.98□□□□□ -0.49
MTHFD1-205ENST00000554057 CARMIL1Q5VZK9 1371 aa11.97□□□□□ -0.49
MTHFD1-205ENST00000554057 ABCC2Q92887 1545 aa11.96□□□□□ -0.49
MTHFD1-205ENST00000554057 KDM4FA0A1W2PPD8 638 aa11.96□□□□□ -0.49
MTHFD1-205ENST00000554057 IQGAP2Q13576 1575 aa11.96□□□□□ -0.5
MTHFD1-205ENST00000554057 TNIKQ9UKE5 1360 aa11.95□□□□□ -0.5
MTHFD1-205ENST00000554057 CARMIL2Q6F5E8 1435 aa11.94□□□□□ -0.5
MTHFD1-205ENST00000554057 ASXL2Q76L83 1435 aa11.94□□□□□ -0.5
MTHFD1-205ENST00000554057 PPRC1Q5VV67 1664 aaKnown RBP11.94□□□□□ -0.5
MTHFD1-205ENST00000554057 GLI2P10070 1586 aa11.92□□□□□ -0.5
MTHFD1-205ENST00000554057 DISP1Q96F81 1524 aa11.91□□□□□ -0.5
MTHFD1-205ENST00000554057 PLB1Q6P1J6 1458 aa11.91□□□□□ -0.5
MTHFD1-205ENST00000554057 UHRF1BP1LA0JNW5 1464 aa11.9□□□□□ -0.5
MTHFD1-205ENST00000554057 UACAQ9BZF9 1416 aa11.9□□□□□ -0.5
MTHFD1-205ENST00000554057 ADGRL1O94910 1474 aa11.87□□□□□ -0.51
MTHFD1-205ENST00000554057 EPRSP07814 1512 aaKnown RBP11.86□□□□□ -0.51
MTHFD1-205ENST00000554057 UGGT2Q9NYU1 1516 aa11.86□□□□□ -0.51
MTHFD1-205ENST00000554057 KDM5BQ9UGL1 1544 aa11.86□□□□□ -0.51
MTHFD1-205ENST00000554057 KIAA0556O60303 1618 aa11.86□□□□□ -0.51
MTHFD1-205ENST00000554057 ZCCHC11Q5TAX3 1644 aaKnown RBP11.86□□□□□ -0.51
MTHFD1-205ENST00000554057 MAP3K4Q9Y6R4 1608 aa11.86□□□□□ -0.51
MTHFD1-205ENST00000554057 COL17A1Q9UMD9 1497 aaPredicted RBP11.86□□□□□ -0.51
MTHFD1-205ENST00000554057 RAPGEF2Q9Y4G8 1499 aa11.84□□□□□ -0.51
MTHFD1-205ENST00000554057 TEX14Q8IWB6 1497 aa11.82□□□□□ -0.52
MTHFD1-205ENST00000554057 WDR7Q9Y4E6 1490 aa11.81□□□□□ -0.52
MTHFD1-205ENST00000554057 CTTNBP2Q8WZ74 1663 aa11.81□□□□□ -0.52
MTHFD1-205ENST00000554057 ILDR1Q86SU0 546 aaPredicted RBP11.77□□□□□ -0.53
MTHFD1-205ENST00000554057 HECW2Q9P2P5 1572 aa11.76□□□□□ -0.53
MTHFD1-205ENST00000554057 ABCA8O94911 1581 aa11.75□□□□□ -0.53
MTHFD1-205ENST00000554057 CFAP43Q8NDM7 1665 aa11.75□□□□□ -0.53
MTHFD1-205ENST00000554057 GOLGA3Q08378 1498 aa11.73□□□□□ -0.53
MTHFD1-205ENST00000554057 CHIC1Q5VXU3 224 aa11.73□□□□□ -0.53
MTHFD1-205ENST00000554057 CD109Q6YHK3 1445 aa11.73□□□□□ -0.53
MTHFD1-205ENST00000554057 MAGI3Q5TCQ9 1506 aa11.72□□□□□ -0.53
MTHFD1-205ENST00000554057 KCNH8Q96L42 1107 aa11.71□□□□□ -0.53
MTHFD1-205ENST00000554057 KIF21BO75037 1637 aa11.7□□□□□ -0.54
MTHFD1-205ENST00000554057 PRXQ9BXM0 1461 aa11.69□□□□□ -0.54
MTHFD1-205ENST00000554057 ARID3CA6NKF2 412 aa11.68□□□□□ -0.54
MTHFD1-205ENST00000554057 P3H3Q8IVL6 736 aa11.64□□□□□ -0.55
MTHFD1-205ENST00000554057 ATP10BO94823 1461 aa11.63□□□□□ -0.55
MTHFD1-205ENST00000554057 ARAP3Q8WWN8 1544 aa11.63□□□□□ -0.55
MTHFD1-205ENST00000554057 ABCA9Q8IUA7 1624 aa11.62□□□□□ -0.55
MTHFD1-205ENST00000554057 SAMD9Q5K651 1589 aa11.61□□□□□ -0.55
MTHFD1-205ENST00000554057 RAPGEF6Q8TEU7 1601 aa11.6□□□□□ -0.55
MTHFD1-205ENST00000554057 FRMPD1Q5SYB0 1578 aa11.58□□□□□ -0.55
MTHFD1-205ENST00000554057 ADAMTSL3P82987 1691 aa11.58□□□□□ -0.56
MTHFD1-205ENST00000554057 PTPRMP28827 1452 aa11.57□□□□□ -0.56
MTHFD1-205ENST00000554057 RAPGEF3O95398 923 aa11.57□□□□□ -0.56
MTHFD1-205ENST00000554057 NEO1Q92859 1461 aa11.57□□□□□ -0.56
MTHFD1-205ENST00000554057 FAM9AQ8IZU1 332 aaPredicted RBP11.56□□□□□ -0.56
MTHFD1-205ENST00000554057 NUP153P49790 1475 aaKnown RBP11.56□□□□□ -0.56
MTHFD1-205ENST00000554057 PHLDB1Q86UU1 1377 aa11.55□□□□□ -0.56
MTHFD1-205ENST00000554057 BCORL1Q5H9F3 1711 aa11.55□□□□□ -0.56
MTHFD1-205ENST00000554057 HRCP23327 699 aa11.55□□□□□ -0.56
MTHFD1-205ENST00000554057 MADDQ8WXG6 1647 aa11.55□□□□□ -0.56
MTHFD1-205ENST00000554057 FHOD3Q2V2M9 1422 aa11.54□□□□□ -0.56
MTHFD1-205ENST00000554057 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.54□□□□□ -0.56
MTHFD1-205ENST00000554057 HNRNPUL2Q1KMD3 747 aaKnown RBP11.54□□□□□ -0.56
MTHFD1-205ENST00000554057 ARHGEF40Q8TER5 1519 aa11.54□□□□□ -0.56
MTHFD1-205ENST00000554057 RANGAP1P46060 587 aaPredicted RBP11.53□□□□□ -0.56
MTHFD1-205ENST00000554057 CSRNP3Q8WYN3 585 aa11.52□□□□□ -0.57
MTHFD1-205ENST00000554057 ARID4BQ4LE39 1312 aaPredicted RBP11.52□□□□□ -0.57
MTHFD1-205ENST00000554057 PCF11O94913 1555 aaKnown RBP11.51□□□□□ -0.57
MTHFD1-205ENST00000554057 RIMS1Q86UR5 1692 aaKnown RBP11.51□□□□□ -0.57
MTHFD1-205ENST00000554057 RICTORQ6R327 1708 aa11.5□□□□□ -0.57
MTHFD1-205ENST00000554057 DENND4BO75064 1496 aaPredicted RBP11.5□□□□□ -0.57
MTHFD1-205ENST00000554057 FBXO41Q8TF61 875 aa11.49□□□□□ -0.57
MTHFD1-205ENST00000554057 LMTK3Q96Q04 1460 aa11.49□□□□□ -0.57
MTHFD1-205ENST00000554057 TTC37Q6PGP7 1564 aa11.49□□□□□ -0.57
MTHFD1-205ENST00000554057 CFAP74Q9C0B2 1584 aa11.47□□□□□ -0.57
MTHFD1-205ENST00000554057 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.47□□□□□ -0.57
MTHFD1-205ENST00000554057 FANCAO15360 1455 aa11.47□□□□□ -0.57
MTHFD1-205ENST00000554057 AKNAQ7Z591 1439 aa11.47□□□□□ -0.57
MTHFD1-205ENST00000554057 SIGLEC1Q9BZZ2 1709 aa11.46□□□□□ -0.57
MTHFD1-205ENST00000554057 CDK13Q14004 1512 aaKnown RBP11.45□□□□□ -0.58
MTHFD1-205ENST00000554057 ZMYM4Q5VZL5 1548 aa11.45□□□□□ -0.58
MTHFD1-205ENST00000554057 EEA1Q15075 1411 aa11.45□□□□□ -0.58
MTHFD1-205ENST00000554057 YEATS2Q9ULM3 1422 aa11.45□□□□□ -0.58
MTHFD1-205ENST00000554057 PLEKHD1A6NEE1 506 aa11.45□□□□□ -0.58
MTHFD1-205ENST00000554057 PLPPR3Q6T4P5 718 aa11.45□□□□□ -0.58
MTHFD1-205ENST00000554057 EFCAB5A4FU69 1503 aa11.45□□□□□ -0.58
MTHFD1-205ENST00000554057 ZFYVE16Q7Z3T8 1539 aa11.45□□□□□ -0.58
MTHFD1-205ENST00000554057 HSPA2P54652 639 aa11.42□□□□□ -0.58
MTHFD1-205ENST00000554057 HECW1Q76N89 1606 aa11.42□□□□□ -0.58
MTHFD1-205ENST00000554057 LRRIQ1Q96JM4 1722 aa11.41□□□□□ -0.58
MTHFD1-205ENST00000554057 POGZQ7Z3K3 1410 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms