RNA–Protein interactions for RNA: ENST00000553927.1

RPGRIP1-204, Transcript of RPGR interacting protein 1, humanhuman

TSL 2

Gene RPGRIP1, Length 2,875 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-204ENST00000553927 IL27Q8NEV9 243 aa9.51□□□□□ -0.89
RPGRIP1-204ENST00000553927 B4GALNT3Q6L9W6 998 aa9.51□□□□□ -0.89
RPGRIP1-204ENST00000553927 NACADO15069 1562 aa9.5□□□□□ -0.89
RPGRIP1-204ENST00000553927 EEA1Q15075 1411 aa9.49□□□□□ -0.89
RPGRIP1-204ENST00000553927 PPP1R15AO75807 674 aaPredicted RBP9.49□□□□□ -0.89
RPGRIP1-204ENST00000553927 RAPGEF2Q9Y4G8 1499 aa9.48□□□□□ -0.89
RPGRIP1-204ENST00000553927 CEP164Q9UPV0 1460 aa9.48□□□□□ -0.89
RPGRIP1-204ENST00000553927 PPP6R1Q9UPN7 881 aa9.47□□□□□ -0.89
RPGRIP1-204ENST00000553927 NOP58Q9Y2X3 529 aaKnown RBP9.47□□□□□ -0.89
RPGRIP1-204ENST00000553927 WDR97A6NE52 1622 aa9.47□□□□□ -0.89
RPGRIP1-204ENST00000553927 KIF21BO75037 1637 aa9.46□□□□□ -0.9
RPGRIP1-204ENST00000553927 BAZ1BQ9UIG0 1483 aaKnown RBP9.45□□□□□ -0.9
RPGRIP1-204ENST00000553927 RAB3GAP2Q9H2M9 1393 aa9.45□□□□□ -0.9
RPGRIP1-204ENST00000553927 ADRA2BP18089 450 aa9.44□□□□□ -0.9
RPGRIP1-204ENST00000553927 SENP3-EIF4A1A0A087X0R7 540 aa9.43□□□□□ -0.9
RPGRIP1-204ENST00000553927 SMARCA2P51531 1590 aa9.43□□□□□ -0.9
RPGRIP1-204ENST00000553927 MYT1LQ9UL68 1186 aa9.42□□□□□ -0.9
RPGRIP1-204ENST00000553927 CCER2I3L3R5 266 aa9.42□□□□□ -0.9
RPGRIP1-204ENST00000553927 RTL5Q5HYW3 569 aaPredicted RBP9.42□□□□□ -0.9
RPGRIP1-204ENST00000553927 MAPKBP1O60336 1514 aa9.41□□□□□ -0.9
RPGRIP1-204ENST00000553927 TOP2AP11388 1531 aaKnown RBP9.41□□□□□ -0.9
RPGRIP1-204ENST00000553927 CNGB1Q14028 1251 aaPredicted RBP9.4□□□□□ -0.9
RPGRIP1-204ENST00000553927 CCNB3Q8WWL7 1395 aa9.4□□□□□ -0.9
RPGRIP1-204ENST00000553927 PPP4R2Q9NY27 417 aa9.4□□□□□ -0.91
RPGRIP1-204ENST00000553927 FAM50AQ14320 339 aaKnown RBP9.39□□□□□ -0.91
RPGRIP1-204ENST00000553927 CCDC184Q52MB2 194 aa9.38□□□□□ -0.91
RPGRIP1-204ENST00000553927 NPM2Q86SE8 214 aaKnown RBP9.38□□□□□ -0.91
RPGRIP1-204ENST00000553927 FAM9BQ8IZU0 186 aa9.37□□□□□ -0.91
RPGRIP1-204ENST00000553927 SYNJ1O43426 1573 aa9.37□□□□□ -0.91
RPGRIP1-204ENST00000553927 LAS1LQ9Y4W2 734 aaKnown RBP9.37□□□□□ -0.91
RPGRIP1-204ENST00000553927 EIF5BO60841 1220 aaKnown RBP9.36□□□□□ -0.91
RPGRIP1-204ENST00000553927 ARAP1Q96P48 1450 aa9.35□□□□□ -0.91
RPGRIP1-204ENST00000553927 SLC4A1APQ9BWU0 796 aaKnown RBP9.35□□□□□ -0.91
RPGRIP1-204ENST00000553927 RRBP1Q9P2E9 1410 aaKnown RBP9.35□□□□□ -0.91
RPGRIP1-204ENST00000553927 ANP32AP39687 249 aaKnown RBP9.34□□□□□ -0.91
RPGRIP1-204ENST00000553927 TULP1O00294 542 aaPredicted RBP9.34□□□□□ -0.92
RPGRIP1-204ENST00000553927 ZBTB47Q9UFB7 747 aaPredicted RBP9.34□□□□□ -0.92
RPGRIP1-204ENST00000553927 ERICH6BQ5W0A0 696 aa9.33□□□□□ -0.92
RPGRIP1-204ENST00000553927 ATP1B4Q9UN42 357 aaPredicted RBP9.33□□□□□ -0.92
RPGRIP1-204ENST00000553927 IPO9Q96P70 1041 aaKnown RBP9.31□□□□□ -0.92
RPGRIP1-204ENST00000553927 ZBTB22O15209 634 aa9.31□□□□□ -0.92
RPGRIP1-204ENST00000553927 SETD5Q9C0A6 1442 aa9.3□□□□□ -0.92
RPGRIP1-204ENST00000553927 TAOK2Q9UL54 1235 aa9.3□□□□□ -0.92
RPGRIP1-204ENST00000553927 CUX2O14529 1486 aa9.3□□□□□ -0.92
RPGRIP1-204ENST00000553927 NEFMP07197 916 aa9.3□□□□□ -0.92
RPGRIP1-204ENST00000553927 BRPF3Q9ULD4 1205 aa9.3□□□□□ -0.92
RPGRIP1-204ENST00000553927 SMARCA4P51532 1647 aa9.28□□□□□ -0.92
RPGRIP1-204ENST00000553927 TONSLQ96HA7 1378 aa9.28□□□□□ -0.92
RPGRIP1-204ENST00000553927 UBE2Q2Q8WVN8 375 aa9.27□□□□□ -0.93
RPGRIP1-204ENST00000553927 MRS2Q9HD23 443 aa9.27□□□□□ -0.93
RPGRIP1-204ENST00000553927 AKNAQ7Z591 1439 aa9.26□□□□□ -0.93
RPGRIP1-204ENST00000553927 P3H3Q8IVL6 736 aa9.25□□□□□ -0.93
RPGRIP1-204ENST00000553927 WASHC2AQ641Q2 1341 aa9.24□□□□□ -0.93
RPGRIP1-204ENST00000553927 PHLDB1Q86UU1 1377 aa9.24□□□□□ -0.93
RPGRIP1-204ENST00000553927 PABPN1Q86U42 306 aaKnown RBP eCLIP9.23□□□□□ -0.93
RPGRIP1-204ENST00000553927 HSPA5P11021 654 aaKnown RBP9.23□□□□□ -0.93
RPGRIP1-204ENST00000553927 TPRNQ4KMQ1 711 aa9.22□□□□□ -0.93
RPGRIP1-204ENST00000553927 SKAP1Q86WV1 359 aa9.2□□□□□ -0.94
RPGRIP1-204ENST00000553927 POLR3GLQ9BT43 218 aa9.2□□□□□ -0.94
RPGRIP1-204ENST00000553927 ARHGAP35Q9NRY4 1499 aa9.2□□□□□ -0.94
RPGRIP1-204ENST00000553927 C11orf95C9JLR9 678 aaPredicted RBP9.19□□□□□ -0.94
RPGRIP1-204ENST00000553927 SLC4A3P48751 1232 aa9.19□□□□□ -0.94
RPGRIP1-204ENST00000553927 ZBED9Q6R2W3 1325 aa9.18□□□□□ -0.94
RPGRIP1-204ENST00000553927 POTEDQ86YR6 584 aa9.18□□□□□ -0.94
RPGRIP1-204ENST00000553927 PIAS4Q8N2W9 510 aaPredicted RBP9.18□□□□□ -0.94
RPGRIP1-204ENST00000553927 PRKRIP1Q9H875 184 aaPredicted RBP9.18□□□□□ -0.94
RPGRIP1-204ENST00000553927 PRXQ9BXM0 1461 aa9.17□□□□□ -0.94
RPGRIP1-204ENST00000553927 FRAT1Q92837 279 aaPredicted RBP9.14□□□□□ -0.95
RPGRIP1-204ENST00000553927 PDE4AP27815 886 aa9.13□□□□□ -0.95
RPGRIP1-204ENST00000553927 EIF4G2P78344 907 aaKnown RBP eCLIP9.13□□□□□ -0.95
RPGRIP1-204ENST00000553927 ARXQ96QS3 562 aa9.13□□□□□ -0.95
RPGRIP1-204ENST00000553927 GSE1Q14687 1217 aa9.12□□□□□ -0.95
RPGRIP1-204ENST00000553927 EXOC6Q8TAG9 804 aa9.12□□□□□ -0.95
RPGRIP1-204ENST00000553927 CNTLNQ9NXG0 1405 aa9.12□□□□□ -0.95
RPGRIP1-204ENST00000553927 LRRC9Q6ZRR7 1453 aa9.12□□□□□ -0.95
RPGRIP1-204ENST00000553927 WASHC2CQ9Y4E1 1318 aa9.12□□□□□ -0.95
RPGRIP1-204ENST00000553927 TIAM1Q13009 1591 aa9.12□□□□□ -0.95
RPGRIP1-204ENST00000553927 NUDCQ9Y266 331 aa9.12□□□□□ -0.95
RPGRIP1-204ENST00000553927 ERICH3Q5RHP9 1530 aa9.12□□□□□ -0.95
RPGRIP1-204ENST00000553927 PKNOX2Q96KN3 472 aa9.11□□□□□ -0.95
RPGRIP1-204ENST00000553927 KLHL34Q8N239 644 aa9.11□□□□□ -0.95
RPGRIP1-204ENST00000553927 CHIC2Q9UKJ5 165 aa9.1□□□□□ -0.95
RPGRIP1-204ENST00000553927 FHAD1B1AJZ9 1412 aa9.1□□□□□ -0.95
RPGRIP1-204ENST00000553927 AQRO60306 1485 aaKnown RBP eCLIP9.1□□□□□ -0.95
RPGRIP1-204ENST00000553927 CCDC18Q5T9S5 1454 aa9.1□□□□□ -0.95
RPGRIP1-204ENST00000553927 NFKBIBQ15653 356 aa9.1□□□□□ -0.95
RPGRIP1-204ENST00000553927 RRP7BPQ9NSQ0 103 aa9.09□□□□□ -0.95
RPGRIP1-204ENST00000553927 PPM1GO15355 546 aaPredicted RBP9.08□□□□□ -0.96
RPGRIP1-204ENST00000553927 USP35Q9P2H5 1018 aa9.08□□□□□ -0.96
RPGRIP1-204ENST00000553927 PEG3Q9GZU2 1588 aa9.08□□□□□ -0.96
RPGRIP1-204ENST00000553927 TOP2BQ02880 1626 aa9.08□□□□□ -0.96
RPGRIP1-204ENST00000553927 CCDC7Q96M83 1385 aa9.08□□□□□ -0.96
RPGRIP1-204ENST00000553927 SMG6Q86US8 1419 aaKnown RBP9.07□□□□□ -0.96
RPGRIP1-204ENST00000553927 DCAF11Q8TEB1 546 aa9.06□□□□□ -0.96
RPGRIP1-204ENST00000553927 BACH2Q9BYV9 841 aa9.06□□□□□ -0.96
RPGRIP1-204ENST00000553927 L3MBTL2Q969R5 705 aa9.06□□□□□ -0.96
RPGRIP1-204ENST00000553927 PTPRKQ15262 1439 aa9.06□□□□□ -0.96
RPGRIP1-204ENST00000553927 KIF27Q86VH2 1401 aa9.06□□□□□ -0.96
RPGRIP1-204ENST00000553927 PLIN1O60240 522 aa9.06□□□□□ -0.96
RPGRIP1-204ENST00000553927 KIF7Q2M1P5 1343 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms