RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 KIAA0586Q9BVV6 1533 aa11.09□□□□□ -0.63
FOXN3-205ENST00000553904 SHROOM2Q13796 1616 aa11.06□□□□□ -0.64
FOXN3-205ENST00000553904 CUL7Q14999 1698 aa11.04□□□□□ -0.64
FOXN3-205ENST00000553904 ERCC6L2Q5T890 1561 aa11.04□□□□□ -0.64
FOXN3-205ENST00000553904 CARMIL2Q6F5E8 1435 aa11.03□□□□□ -0.64
FOXN3-205ENST00000553904 FAM9AQ8IZU1 332 aaPredicted RBP11.03□□□□□ -0.64
FOXN3-205ENST00000553904 PTPRGP23470 1445 aa11.01□□□□□ -0.65
FOXN3-205ENST00000553904 FAM69CQ0P6D2 419 aa11□□□□□ -0.65
FOXN3-205ENST00000553904 RUSC2Q8N2Y8 1516 aa10.99□□□□□ -0.65
FOXN3-205ENST00000553904 TTBK1Q5TCY1 1321 aaPredicted RBP10.99□□□□□ -0.65
FOXN3-205ENST00000553904 TNIKQ9UKE5 1360 aa10.99□□□□□ -0.65
FOXN3-205ENST00000553904 RAPGEF2Q9Y4G8 1499 aa10.99□□□□□ -0.65
FOXN3-205ENST00000553904 AEBP2Q6ZN18 517 aaPredicted RBP10.95□□□□□ -0.66
FOXN3-205ENST00000553904 IQGAP2Q13576 1575 aa10.92□□□□□ -0.66
FOXN3-205ENST00000553904 CSRNP3Q8WYN3 585 aa10.92□□□□□ -0.66
FOXN3-205ENST00000553904 ABCC10Q5T3U5 1492 aa10.92□□□□□ -0.66
FOXN3-205ENST00000553904 MAPKBP1O60336 1514 aa10.9□□□□□ -0.66
FOXN3-205ENST00000553904 UACAQ9BZF9 1416 aa10.9□□□□□ -0.66
FOXN3-205ENST00000553904 GOLGA3Q08378 1498 aa10.87□□□□□ -0.67
FOXN3-205ENST00000553904 ABCC2Q92887 1545 aa10.87□□□□□ -0.67
FOXN3-205ENST00000553904 UGGT2Q9NYU1 1516 aa10.87□□□□□ -0.67
FOXN3-205ENST00000553904 UHRF1BP1LA0JNW5 1464 aa10.87□□□□□ -0.67
FOXN3-205ENST00000553904 PLB1Q6P1J6 1458 aa10.87□□□□□ -0.67
FOXN3-205ENST00000553904 ADCY10Q96PN6 1610 aa10.86□□□□□ -0.67
FOXN3-205ENST00000553904 PRXQ9BXM0 1461 aa10.86□□□□□ -0.67
FOXN3-205ENST00000553904 DISP1Q96F81 1524 aa10.85□□□□□ -0.67
FOXN3-205ENST00000553904 EEA1Q15075 1411 aa10.84□□□□□ -0.67
FOXN3-205ENST00000553904 ASXL2Q76L83 1435 aa10.83□□□□□ -0.68
FOXN3-205ENST00000553904 KDM5BQ9UGL1 1544 aa10.8□□□□□ -0.68
FOXN3-205ENST00000553904 P3H3Q8IVL6 736 aa10.8□□□□□ -0.68
FOXN3-205ENST00000553904 DIP2BQ9P265 1576 aa10.8□□□□□ -0.68
FOXN3-205ENST00000553904 KIAA0556O60303 1618 aa10.78□□□□□ -0.68
FOXN3-205ENST00000553904 KCNH8Q96L42 1107 aa10.78□□□□□ -0.68
FOXN3-205ENST00000553904 KIF13AQ9H1H9 1805 aa10.78□□□□□ -0.68
FOXN3-205ENST00000553904 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.76□□□□□ -0.69
FOXN3-205ENST00000553904 HNRNPUL2Q1KMD3 747 aaKnown RBP10.76□□□□□ -0.69
FOXN3-205ENST00000553904 GLI2P10070 1586 aa10.76□□□□□ -0.69
FOXN3-205ENST00000553904 TEX14Q8IWB6 1497 aa10.74□□□□□ -0.69
FOXN3-205ENST00000553904 EPRSP07814 1512 aaKnown RBP10.74□□□□□ -0.69
FOXN3-205ENST00000553904 CTTNBP2Q8WZ74 1663 aa10.74□□□□□ -0.69
FOXN3-205ENST00000553904 UBTFP17480 764 aaKnown RBP10.74□□□□□ -0.69
FOXN3-205ENST00000553904 RANGAP1P46060 587 aaPredicted RBP10.74□□□□□ -0.69
FOXN3-205ENST00000553904 CHIC1Q5VXU3 224 aa10.74□□□□□ -0.69
FOXN3-205ENST00000553904 KDM6BO15054 1643 aa10.73□□□□□ -0.69
FOXN3-205ENST00000553904 WDR7Q9Y4E6 1490 aa10.73□□□□□ -0.69
FOXN3-205ENST00000553904 CD109Q6YHK3 1445 aa10.72□□□□□ -0.69
FOXN3-205ENST00000553904 PLEKHD1A6NEE1 506 aa10.71□□□□□ -0.69
FOXN3-205ENST00000553904 ABCA8O94911 1581 aa10.7□□□□□ -0.7
FOXN3-205ENST00000553904 ARID3CA6NKF2 412 aa10.7□□□□□ -0.7
FOXN3-205ENST00000553904 ZCCHC11Q5TAX3 1644 aaKnown RBP10.69□□□□□ -0.7
FOXN3-205ENST00000553904 ATP10BO94823 1461 aa10.68□□□□□ -0.7
FOXN3-205ENST00000553904 TSPOAP1O95153 1857 aa10.68□□□□□ -0.7
FOXN3-205ENST00000553904 PHLDB1Q86UU1 1377 aa10.68□□□□□ -0.7
FOXN3-205ENST00000553904 MAGI3Q5TCQ9 1506 aa10.66□□□□□ -0.7
FOXN3-205ENST00000553904 KDM4FA0A1W2PPD8 638 aa10.65□□□□□ -0.7
FOXN3-205ENST00000553904 EHMT2Q96KQ7 1210 aa10.65□□□□□ -0.7
FOXN3-205ENST00000553904 ATP1B4Q9UN42 357 aaPredicted RBP10.65□□□□□ -0.7
FOXN3-205ENST00000553904 CDK11AQ9UQ88 783 aaPredicted RBP10.65□□□□□ -0.7
FOXN3-205ENST00000553904 MAP3K4Q9Y6R4 1608 aa10.65□□□□□ -0.7
FOXN3-205ENST00000553904 KIF21BO75037 1637 aa10.62□□□□□ -0.71
FOXN3-205ENST00000553904 SAMD9Q5K651 1589 aa10.62□□□□□ -0.71
FOXN3-205ENST00000553904 COL17A1Q9UMD9 1497 aaPredicted RBP10.61□□□□□ -0.71
FOXN3-205ENST00000553904 FHOD3Q2V2M9 1422 aa10.61□□□□□ -0.71
FOXN3-205ENST00000553904 EFCAB5A4FU69 1503 aa10.61□□□□□ -0.71
FOXN3-205ENST00000553904 FMN1Q68DA7 1419 aa10.6□□□□□ -0.71
FOXN3-205ENST00000553904 RAPGEF6Q8TEU7 1601 aa10.6□□□□□ -0.71
FOXN3-205ENST00000553904 CFAP43Q8NDM7 1665 aa10.6□□□□□ -0.71
FOXN3-205ENST00000553904 PPRC1Q5VV67 1664 aaKnown RBP10.59□□□□□ -0.71
FOXN3-205ENST00000553904 NUP153P49790 1475 aaKnown RBP10.58□□□□□ -0.72
FOXN3-205ENST00000553904 ARAP3Q8WWN8 1544 aa10.58□□□□□ -0.72
FOXN3-205ENST00000553904 NEO1Q92859 1461 aa10.56□□□□□ -0.72
FOXN3-205ENST00000553904 RAPGEF3O95398 923 aa10.56□□□□□ -0.72
FOXN3-205ENST00000553904 EFCAB2Q5VUJ9 269 aa10.54□□□□□ -0.72
FOXN3-205ENST00000553904 ABCA9Q8IUA7 1624 aa10.54□□□□□ -0.72
FOXN3-205ENST00000553904 ADGRL1O94910 1474 aa10.53□□□□□ -0.72
FOXN3-205ENST00000553904 ARID4BQ4LE39 1312 aaPredicted RBP10.53□□□□□ -0.72
FOXN3-205ENST00000553904 AKNAQ7Z591 1439 aa10.51□□□□□ -0.73
FOXN3-205ENST00000553904 ARHGAP35Q9NRY4 1499 aa10.51□□□□□ -0.73
FOXN3-205ENST00000553904 DENND4BO75064 1496 aaPredicted RBP10.5□□□□□ -0.73
FOXN3-205ENST00000553904 PLCH2O75038 1416 aa10.5□□□□□ -0.73
FOXN3-205ENST00000553904 CLIP1P30622 1438 aa10.5□□□□□ -0.73
FOXN3-205ENST00000553904 FANCAO15360 1455 aa10.49□□□□□ -0.73
FOXN3-205ENST00000553904 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.47□□□□□ -0.73
FOXN3-205ENST00000553904 HECW1Q76N89 1606 aa10.47□□□□□ -0.73
FOXN3-205ENST00000553904 MYT1LQ9UL68 1186 aa10.46□□□□□ -0.73
FOXN3-205ENST00000553904 TROQ12816 1431 aaPredicted RBP10.46□□□□□ -0.74
FOXN3-205ENST00000553904 CFAP74Q9C0B2 1584 aa10.45□□□□□ -0.74
FOXN3-205ENST00000553904 CDK13Q14004 1512 aaKnown RBP10.45□□□□□ -0.74
FOXN3-205ENST00000553904 POGZQ7Z3K3 1410 aa10.45□□□□□ -0.74
FOXN3-205ENST00000553904 CASKIN1Q8WXD9 1431 aa10.45□□□□□ -0.74
FOXN3-205ENST00000553904 SCAPERQ9BY12 1400 aa10.45□□□□□ -0.74
FOXN3-205ENST00000553904 MAGI2Q86UL8 1455 aa10.44□□□□□ -0.74
FOXN3-205ENST00000553904 CCDC18Q5T9S5 1454 aa10.43□□□□□ -0.74
FOXN3-205ENST00000553904 AFAP1Q8N556 730 aa10.4□□□□□ -0.74
FOXN3-205ENST00000553904 KIF14Q15058 1648 aa10.4□□□□□ -0.75
FOXN3-205ENST00000553904 MLECQ14165 292 aa10.39□□□□□ -0.75
FOXN3-205ENST00000553904 ARHGAP5Q13017 1502 aa10.38□□□□□ -0.75
FOXN3-205ENST00000553904 FYCO1Q9BQS8 1478 aa10.38□□□□□ -0.75
FOXN3-205ENST00000553904 ESF1Q9H501 851 aaKnown RBP10.38□□□□□ -0.75
FOXN3-205ENST00000553904 ZNF777Q9ULD5 760 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms