RNA–Protein interactions for RNA: ENST00000553831.5

PRKCH-207, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-207ENST00000553831 JPH4Q96JJ6 628 aa24.15■■□□□ 1.46
PRKCH-207ENST00000553831 KIAA0586Q9BVV6 1533 aa24.15■■□□□ 1.46
PRKCH-207ENST00000553831 PRG4Q92954 1404 aaPredicted RBP24.14■■□□□ 1.45
PRKCH-207ENST00000553831 RAPGEF2Q9Y4G8 1499 aa24.09■■□□□ 1.45
PRKCH-207ENST00000553831 IQGAP2Q13576 1575 aa24■■□□□ 1.43
PRKCH-207ENST00000553831 PRXQ9BXM0 1461 aa23.99■■□□□ 1.43
PRKCH-207ENST00000553831 CHIC1Q5VXU3 224 aa23.92■■□□□ 1.42
PRKCH-207ENST00000553831 EEA1Q15075 1411 aa23.9■■□□□ 1.42
PRKCH-207ENST00000553831 TRHP20396 242 aaPredicted RBP23.89■■□□□ 1.41
PRKCH-207ENST00000553831 CSRNP3Q8WYN3 585 aa23.89■■□□□ 1.41
PRKCH-207ENST00000553831 CARMIL2Q6F5E8 1435 aa23.88■■□□□ 1.41
PRKCH-207ENST00000553831 CTTNBP2Q8WZ74 1663 aa23.87■■□□□ 1.41
PRKCH-207ENST00000553831 UGGT2Q9NYU1 1516 aa23.87■■□□□ 1.41
PRKCH-207ENST00000553831 DISP1Q96F81 1524 aa23.85■■□□□ 1.41
PRKCH-207ENST00000553831 TNIKQ9UKE5 1360 aa23.83■■□□□ 1.41
PRKCH-207ENST00000553831 PTPRGP23470 1445 aa23.82■■□□□ 1.4
PRKCH-207ENST00000553831 ADCY10Q96PN6 1610 aa23.81■■□□□ 1.4
PRKCH-207ENST00000553831 FAM9AQ8IZU1 332 aaPredicted RBP23.8■■□□□ 1.4
PRKCH-207ENST00000553831 TTBK1Q5TCY1 1321 aaPredicted RBP23.8■■□□□ 1.4
PRKCH-207ENST00000553831 KIAA0556O60303 1618 aa23.79■■□□□ 1.4
PRKCH-207ENST00000553831 GOLGA3Q08378 1498 aa23.7■■□□□ 1.38
PRKCH-207ENST00000553831 NPM1P06748 294 aaKnown RBP eCLIP23.69■■□□□ 1.38
PRKCH-207ENST00000553831 KIF21BO75037 1637 aa23.69■■□□□ 1.38
PRKCH-207ENST00000553831 MAPKBP1O60336 1514 aa23.68■■□□□ 1.38
PRKCH-207ENST00000553831 UACAQ9BZF9 1416 aa23.67■■□□□ 1.38
PRKCH-207ENST00000553831 UHRF1BP1LA0JNW5 1464 aa23.66■■□□□ 1.38
PRKCH-207ENST00000553831 ABCC2Q92887 1545 aa23.64■■□□□ 1.38
PRKCH-207ENST00000553831 KIF13AQ9H1H9 1805 aa23.6■■□□□ 1.37
PRKCH-207ENST00000553831 ABCC10Q5T3U5 1492 aa23.59■■□□□ 1.37
PRKCH-207ENST00000553831 SAMD9Q5K651 1589 aa23.58■■□□□ 1.37
PRKCH-207ENST00000553831 DIP2BQ9P265 1576 aa23.57■■□□□ 1.36
PRKCH-207ENST00000553831 PLB1Q6P1J6 1458 aa23.56■■□□□ 1.36
PRKCH-207ENST00000553831 KDM5BQ9UGL1 1544 aa23.54■■□□□ 1.36
PRKCH-207ENST00000553831 P3H3Q8IVL6 736 aa23.54■■□□□ 1.36
PRKCH-207ENST00000553831 ABCA8O94911 1581 aa23.53■■□□□ 1.36
PRKCH-207ENST00000553831 EHMT2Q96KQ7 1210 aa23.53■■□□□ 1.36
PRKCH-207ENST00000553831 FAM69CQ0P6D2 419 aa23.52■■□□□ 1.36
PRKCH-207ENST00000553831 ASXL2Q76L83 1435 aa23.51■■□□□ 1.35
PRKCH-207ENST00000553831 ZCCHC11Q5TAX3 1644 aaKnown RBP23.51■■□□□ 1.35
PRKCH-207ENST00000553831 RANGAP1P46060 587 aaPredicted RBP23.5■■□□□ 1.35
PRKCH-207ENST00000553831 UBTFP17480 764 aaKnown RBP23.46■■□□□ 1.35
PRKCH-207ENST00000553831 FHOD3Q2V2M9 1422 aa23.45■■□□□ 1.34
PRKCH-207ENST00000553831 EFCAB5A4FU69 1503 aa23.43■■□□□ 1.34
PRKCH-207ENST00000553831 GLI2P10070 1586 aa23.38■■□□□ 1.33
PRKCH-207ENST00000553831 EPRSP07814 1512 aaKnown RBP23.38■■□□□ 1.33
PRKCH-207ENST00000553831 RAPGEF6Q8TEU7 1601 aa23.37■■□□□ 1.33
PRKCH-207ENST00000553831 WDR7Q9Y4E6 1490 aa23.37■■□□□ 1.33
PRKCH-207ENST00000553831 ARID3CA6NKF2 412 aa23.34■■□□□ 1.33
PRKCH-207ENST00000553831 TSPOAP1O95153 1857 aa23.34■■□□□ 1.33
PRKCH-207ENST00000553831 ATP10BO94823 1461 aa23.33■■□□□ 1.33
PRKCH-207ENST00000553831 ARHGAP35Q9NRY4 1499 aa23.31■■□□□ 1.32
PRKCH-207ENST00000553831 NUP153P49790 1475 aaKnown RBP23.3■■□□□ 1.32
PRKCH-207ENST00000553831 MAP3K4Q9Y6R4 1608 aa23.28■■□□□ 1.32
PRKCH-207ENST00000553831 PPRC1Q5VV67 1664 aaKnown RBP23.28■■□□□ 1.32
PRKCH-207ENST00000553831 KCNH8Q96L42 1107 aa23.23■■□□□ 1.31
PRKCH-207ENST00000553831 KDM6BO15054 1643 aa23.21■■□□□ 1.31
PRKCH-207ENST00000553831 FMN1Q68DA7 1419 aa23.2■■□□□ 1.3
PRKCH-207ENST00000553831 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.19■■□□□ 1.3
PRKCH-207ENST00000553831 HNRNPUL2Q1KMD3 747 aaKnown RBP23.19■■□□□ 1.3
PRKCH-207ENST00000553831 CFAP43Q8NDM7 1665 aa23.18■■□□□ 1.3
PRKCH-207ENST00000553831 TEX14Q8IWB6 1497 aa23.17■■□□□ 1.3
PRKCH-207ENST00000553831 CD109Q6YHK3 1445 aa23.16■■□□□ 1.3
PRKCH-207ENST00000553831 CDK13Q14004 1512 aaKnown RBP23.14■■□□□ 1.3
PRKCH-207ENST00000553831 HECW1Q76N89 1606 aa23.13■■□□□ 1.29
PRKCH-207ENST00000553831 MAGI3Q5TCQ9 1506 aa23.13■■□□□ 1.29
PRKCH-207ENST00000553831 CLIP1P30622 1438 aa23.11■■□□□ 1.29
PRKCH-207ENST00000553831 ABCA9Q8IUA7 1624 aa23.1■■□□□ 1.29
PRKCH-207ENST00000553831 ATP1B4Q9UN42 357 aaPredicted RBP23.08■■□□□ 1.29
PRKCH-207ENST00000553831 COL17A1Q9UMD9 1497 aaPredicted RBP23.07■■□□□ 1.28
PRKCH-207ENST00000553831 PLEKHD1A6NEE1 506 aa23.07■■□□□ 1.28
PRKCH-207ENST00000553831 PCF11O94913 1555 aaKnown RBP23.05■■□□□ 1.28
PRKCH-207ENST00000553831 CASKIN1Q8WXD9 1431 aa23.02■■□□□ 1.28
PRKCH-207ENST00000553831 LRRIQ1Q96JM4 1722 aa23■■□□□ 1.27
PRKCH-207ENST00000553831 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.98■■□□□ 1.27
PRKCH-207ENST00000553831 CEP162Q5TB80 1403 aa22.98■■□□□ 1.27
PRKCH-207ENST00000553831 TTC37Q6PGP7 1564 aa22.97■■□□□ 1.27
PRKCH-207ENST00000553831 FYCO1Q9BQS8 1478 aa22.97■■□□□ 1.27
PRKCH-207ENST00000553831 CCDC18Q5T9S5 1454 aa22.95■■□□□ 1.26
PRKCH-207ENST00000553831 LOC105371045A0A1W2PR82 267 aa22.94■■□□□ 1.26
PRKCH-207ENST00000553831 CDK11AQ9UQ88 783 aaPredicted RBP22.94■■□□□ 1.26
PRKCH-207ENST00000553831 ARAP3Q8WWN8 1544 aa22.92■■□□□ 1.26
PRKCH-207ENST00000553831 NEO1Q92859 1461 aa22.92■■□□□ 1.26
PRKCH-207ENST00000553831 TROQ12816 1431 aaPredicted RBP22.92■■□□□ 1.26
PRKCH-207ENST00000553831 PHLDB1Q86UU1 1377 aa22.9■■□□□ 1.26
PRKCH-207ENST00000553831 KIF14Q15058 1648 aa22.9■■□□□ 1.26
PRKCH-207ENST00000553831 FANCAO15360 1455 aa22.85■■□□□ 1.25
PRKCH-207ENST00000553831 CFAP74Q9C0B2 1584 aa22.84■■□□□ 1.25
PRKCH-207ENST00000553831 PLCH2O75038 1416 aa22.83■■□□□ 1.25
PRKCH-207ENST00000553831 AKNAQ7Z591 1439 aa22.82■■□□□ 1.24
PRKCH-207ENST00000553831 FRMPD1Q5SYB0 1578 aa22.81■■□□□ 1.24
PRKCH-207ENST00000553831 MYO5CQ9NQX4 1742 aa22.8■■□□□ 1.24
PRKCH-207ENST00000553831 RAPGEF3O95398 923 aa22.8■■□□□ 1.24
PRKCH-207ENST00000553831 AEBP2Q6ZN18 517 aaPredicted RBP22.78■■□□□ 1.24
PRKCH-207ENST00000553831 DENND4BO75064 1496 aaPredicted RBP22.77■■□□□ 1.24
PRKCH-207ENST00000553831 KDM4FA0A1W2PPD8 638 aa22.75■■□□□ 1.23
PRKCH-207ENST00000553831 ADGRL1O94910 1474 aa22.74■■□□□ 1.23
PRKCH-207ENST00000553831 RICTORQ6R327 1708 aa22.74■■□□□ 1.23
PRKCH-207ENST00000553831 ARHGAP5Q13017 1502 aa22.73■■□□□ 1.23
PRKCH-207ENST00000553831 EFCAB2Q5VUJ9 269 aa22.72■■□□□ 1.23
PRKCH-207ENST00000553831 VPS8Q8N3P4 1428 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms