RNA–Protein interactions for RNA: ENST00000553718.1

TTC8-208, Transcript of tetratricopeptide repeat domain 8, humanhuman

TSL 3

Gene TTC8, Length 479 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC8-208ENST00000553718 TIAM1Q13009 1591 aa16.09■□□□□ 0.17
TTC8-208ENST00000553718 CTTNBP2Q8WZ74 1663 aa16.08■□□□□ 0.16
TTC8-208ENST00000553718 KIF21AQ7Z4S6 1674 aa16.06■□□□□ 0.16
TTC8-208ENST00000553718 TARBP1Q13395 1621 aaKnown RBP16.06■□□□□ 0.16
TTC8-208ENST00000553718 MRC2Q9UBG0 1479 aa16.06■□□□□ 0.16
TTC8-208ENST00000553718 FYCO1Q9BQS8 1478 aa16.05■□□□□ 0.16
TTC8-208ENST00000553718 FMN1Q68DA7 1419 aa16.05■□□□□ 0.16
TTC8-208ENST00000553718 CASKIN1Q8WXD9 1431 aa16.05■□□□□ 0.16
TTC8-208ENST00000553718 CCNB3Q8WWL7 1395 aa16.05■□□□□ 0.16
TTC8-208ENST00000553718 HNRNPUL2Q1KMD3 747 aaKnown RBP16.05■□□□□ 0.16
TTC8-208ENST00000553718 LRRC9Q6ZRR7 1453 aa16.04■□□□□ 0.16
TTC8-208ENST00000553718 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.02■□□□□ 0.16
TTC8-208ENST00000553718 TDRD9Q8NDG6 1382 aaKnown RBP16.01■□□□□ 0.15
TTC8-208ENST00000553718 CFAP43Q8NDM7 1665 aa16.01■□□□□ 0.15
TTC8-208ENST00000553718 IFT140Q96RY7 1462 aa15.99■□□□□ 0.15
TTC8-208ENST00000553718 SAMD9Q5K651 1589 aa15.99■□□□□ 0.15
TTC8-208ENST00000553718 THOC2Q8NI27 1593 aaKnown RBP15.96■□□□□ 0.15
TTC8-208ENST00000553718 WDR62O43379 1518 aa15.96■□□□□ 0.15
TTC8-208ENST00000553718 PCF11O94913 1555 aaKnown RBP15.96■□□□□ 0.14
TTC8-208ENST00000553718 GRIN2BQ13224 1484 aa15.95■□□□□ 0.14
TTC8-208ENST00000553718 FHOD3Q2V2M9 1422 aa15.94■□□□□ 0.14
TTC8-208ENST00000553718 DHX57Q6P158 1386 aaKnown RBP15.93■□□□□ 0.14
TTC8-208ENST00000553718 ZNF316A6NFI3 1004 aaPredicted RBP15.92■□□□□ 0.14
TTC8-208ENST00000553718 SNAPC4Q5SXM2 1469 aa15.91■□□□□ 0.14
TTC8-208ENST00000553718 PBRM1Q86U86 1689 aa15.91■□□□□ 0.14
TTC8-208ENST00000553718 ADAMTS12P58397 1594 aa15.89■□□□□ 0.13
TTC8-208ENST00000553718 PHLDB1Q86UU1 1377 aa15.87■□□□□ 0.13
TTC8-208ENST00000553718 P3H3Q8IVL6 736 aa15.85■□□□□ 0.13
TTC8-208ENST00000553718 CCDC18Q5T9S5 1454 aa15.84■□□□□ 0.13
TTC8-208ENST00000553718 DIEXFQ68CQ4 756 aaKnown RBP15.84■□□□□ 0.13
TTC8-208ENST00000553718 SETD5Q9C0A6 1442 aa15.84■□□□□ 0.13
TTC8-208ENST00000553718 ERCC6Q03468 1493 aa15.84■□□□□ 0.13
TTC8-208ENST00000553718 UGGT2Q9NYU1 1516 aa15.84■□□□□ 0.13
TTC8-208ENST00000553718 IQGAP2Q13576 1575 aa15.83■□□□□ 0.12
TTC8-208ENST00000553718 KIAA0586Q9BVV6 1533 aa15.81■□□□□ 0.12
TTC8-208ENST00000553718 EHBP1L1Q8N3D4 1523 aa15.79■□□□□ 0.12
TTC8-208ENST00000553718 MTUS2Q5JR59 1369 aa15.79■□□□□ 0.12
TTC8-208ENST00000553718 TIMELESSQ9UNS1 1208 aa15.79■□□□□ 0.12
TTC8-208ENST00000553718 RAB3GAP2Q9H2M9 1393 aa15.78■□□□□ 0.12
TTC8-208ENST00000553718 MAGI1Q96QZ7 1491 aaPredicted RBP15.78■□□□□ 0.12
TTC8-208ENST00000553718 FGD6Q6ZV73 1430 aa15.77■□□□□ 0.11
TTC8-208ENST00000553718 HECW1Q76N89 1606 aa15.76■□□□□ 0.11
TTC8-208ENST00000553718 ATP1B4Q9UN42 357 aaPredicted RBP15.76■□□□□ 0.11
TTC8-208ENST00000553718 ARHGEF11O15085 1522 aa15.76■□□□□ 0.11
TTC8-208ENST00000553718 ACIN1Q9UKV3 1341 aaKnown RBP15.75■□□□□ 0.11
TTC8-208ENST00000553718 SUPT6HQ7KZ85 1726 aaKnown RBP15.74■□□□□ 0.11
TTC8-208ENST00000553718 ZNF608Q9ULD9 1512 aaPredicted RBP15.73■□□□□ 0.11
TTC8-208ENST00000553718 MYOM3Q5VTT5 1437 aa15.73■□□□□ 0.11
TTC8-208ENST00000553718 GRIN2AQ12879 1464 aa15.71■□□□□ 0.11
TTC8-208ENST00000553718 NCOA2Q15596 1464 aa15.71■□□□□ 0.11
TTC8-208ENST00000553718 FAM50AQ14320 339 aaKnown RBP15.71■□□□□ 0.11
TTC8-208ENST00000553718 MIA2Q96PC5 1412 aa15.7■□□□□ 0.1
TTC8-208ENST00000553718 TCOF1Q13428 1488 aaKnown RBP15.7■□□□□ 0.1
TTC8-208ENST00000553718 EIF4G3O43432 1585 aaKnown RBP15.7■□□□□ 0.1
TTC8-208ENST00000553718 SYNJ2O15056 1496 aa15.69■□□□□ 0.1
TTC8-208ENST00000553718 EPRSP07814 1512 aaKnown RBP15.68■□□□□ 0.1
TTC8-208ENST00000553718 LRRIQ1Q96JM4 1722 aa15.68■□□□□ 0.1
TTC8-208ENST00000553718 HFM1A2PYH4 1435 aa15.67■□□□□ 0.1
TTC8-208ENST00000553718 KIAA0556O60303 1618 aa15.66■□□□□ 0.1
TTC8-208ENST00000553718 ITGAEP38570 1179 aa15.66■□□□□ 0.1
TTC8-208ENST00000553718 MAPKBP1O60336 1514 aa15.66■□□□□ 0.1
TTC8-208ENST00000553718 AKNAQ7Z591 1439 aa15.66■□□□□ 0.1
TTC8-208ENST00000553718 DISP1Q96F81 1524 aa15.65■□□□□ 0.1
TTC8-208ENST00000553718 NUP160Q12769 1436 aa15.63■□□□□ 0.09
TTC8-208ENST00000553718 CDK11AQ9UQ88 783 aaPredicted RBP15.62■□□□□ 0.09
TTC8-208ENST00000553718 PTPN23Q9H3S7 1636 aa15.61■□□□□ 0.09
TTC8-208ENST00000553718 MAGI3Q5TCQ9 1506 aa15.6■□□□□ 0.09
TTC8-208ENST00000553718 CENPBP07199 599 aaPredicted RBP15.6■□□□□ 0.09
TTC8-208ENST00000553718 CHMP7Q8WUX9 453 aaPredicted RBP15.6■□□□□ 0.09
TTC8-208ENST00000553718 CARMIL2Q6F5E8 1435 aa15.6■□□□□ 0.09
TTC8-208ENST00000553718 UACAQ9BZF9 1416 aa15.6■□□□□ 0.09
TTC8-208ENST00000553718 RAPGEF6Q8TEU7 1601 aa15.57■□□□□ 0.08
TTC8-208ENST00000553718 NAIPQ13075 1403 aa15.57■□□□□ 0.08
TTC8-208ENST00000553718 PTPRKQ15262 1439 aa15.56■□□□□ 0.08
TTC8-208ENST00000553718 CEP170Q5SW79 1584 aa15.55■□□□□ 0.08
TTC8-208ENST00000553718 NUP153P49790 1475 aaKnown RBP15.54■□□□□ 0.08
TTC8-208ENST00000553718 ROCK1Q13464 1354 aa15.53■□□□□ 0.08
TTC8-208ENST00000553718 JPH4Q96JJ6 628 aa15.53■□□□□ 0.08
TTC8-208ENST00000553718 CDK13Q14004 1512 aaKnown RBP15.51■□□□□ 0.07
TTC8-208ENST00000553718 TROQ12816 1431 aaPredicted RBP15.51■□□□□ 0.07
TTC8-208ENST00000553718 GCC2Q8IWJ2 1684 aa15.5■□□□□ 0.07
TTC8-208ENST00000553718 PPP1R15AO75807 674 aaPredicted RBP15.49■□□□□ 0.07
TTC8-208ENST00000553718 ADCY10Q96PN6 1610 aa15.46■□□□□ 0.07
TTC8-208ENST00000553718 MIER1Q8N108 512 aa15.46■□□□□ 0.07
TTC8-208ENST00000553718 ABCA8O94911 1581 aa15.45■□□□□ 0.06
TTC8-208ENST00000553718 DNMT1P26358 1616 aaKnown RBP15.43■□□□□ 0.06
TTC8-208ENST00000553718 SIN3AQ96ST3 1273 aa15.43■□□□□ 0.06
TTC8-208ENST00000553718 DAPK1P53355 1430 aa15.43■□□□□ 0.06
TTC8-208ENST00000553718 ITSN2Q9NZM3 1697 aa15.42■□□□□ 0.06
TTC8-208ENST00000553718 TONSLQ96HA7 1378 aa15.4■□□□□ 0.06
TTC8-208ENST00000553718 ABCC5O15440 1437 aa15.4■□□□□ 0.06
TTC8-208ENST00000553718 PLB1Q6P1J6 1458 aa15.4■□□□□ 0.06
TTC8-208ENST00000553718 FBLN2P98095 1184 aa15.39■□□□□ 0.05
TTC8-208ENST00000553718 NEUROD1Q13562 356 aa15.39■□□□□ 0.05
TTC8-208ENST00000553718 GPATCH8Q9UKJ3 1502 aaKnown RBP15.38■□□□□ 0.05
TTC8-208ENST00000553718 PLEKHD1A6NEE1 506 aa15.38■□□□□ 0.05
TTC8-208ENST00000553718 SCAF1Q9H7N4 1312 aaKnown RBP15.38■□□□□ 0.05
TTC8-208ENST00000553718 ADGRL2O95490 1459 aa15.37■□□□□ 0.05
TTC8-208ENST00000553718 PRG4Q92954 1404 aaPredicted RBP15.36■□□□□ 0.05
TTC8-208ENST00000553718 ATP10BO94823 1461 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms