RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 RUSC2Q8N2Y8 1516 aa26.25■■□□□ 1.79
SDR39U1-205ENST00000553546 IGF1RP08069 1367 aa26.23■■□□□ 1.79
SDR39U1-205ENST00000553546 PRG4Q92954 1404 aaPredicted RBP26.22■■□□□ 1.79
SDR39U1-205ENST00000553546 JPH4Q96JJ6 628 aa26.2■■□□□ 1.78
SDR39U1-205ENST00000553546 KIAA0586Q9BVV6 1533 aa26.14■■□□□ 1.78
SDR39U1-205ENST00000553546 CARMIL1Q5VZK9 1371 aa26.09■■□□□ 1.77
SDR39U1-205ENST00000553546 DIP2BQ9P265 1576 aa26■■□□□ 1.75
SDR39U1-205ENST00000553546 ABCC10Q5T3U5 1492 aa26■■□□□ 1.75
SDR39U1-205ENST00000553546 MAPKBP1O60336 1514 aa25.97■■□□□ 1.75
SDR39U1-205ENST00000553546 IQGAP2Q13576 1575 aa25.93■■□□□ 1.74
SDR39U1-205ENST00000553546 KDM6BO15054 1643 aa25.92■■□□□ 1.74
SDR39U1-205ENST00000553546 ADCY10Q96PN6 1610 aa25.92■■□□□ 1.74
SDR39U1-205ENST00000553546 NPM1P06748 294 aaKnown RBP eCLIP25.91■■□□□ 1.74
SDR39U1-205ENST00000553546 FAM69CQ0P6D2 419 aa25.91■■□□□ 1.74
SDR39U1-205ENST00000553546 CARMIL2Q6F5E8 1435 aa25.9■■□□□ 1.74
SDR39U1-205ENST00000553546 RAPGEF2Q9Y4G8 1499 aa25.9■■□□□ 1.74
SDR39U1-205ENST00000553546 KDM4FA0A1W2PPD8 638 aa25.89■■□□□ 1.74
SDR39U1-205ENST00000553546 PTPRGP23470 1445 aa25.84■■□□□ 1.73
SDR39U1-205ENST00000553546 TSPOAP1O95153 1857 aa25.83■■□□□ 1.72
SDR39U1-205ENST00000553546 TNIKQ9UKE5 1360 aa25.82■■□□□ 1.72
SDR39U1-205ENST00000553546 ILDR1Q86SU0 546 aaPredicted RBP25.78■■□□□ 1.72
SDR39U1-205ENST00000553546 UGGT2Q9NYU1 1516 aa25.76■■□□□ 1.71
SDR39U1-205ENST00000553546 DISP1Q96F81 1524 aa25.74■■□□□ 1.71
SDR39U1-205ENST00000553546 CTTNBP2Q8WZ74 1663 aa25.71■■□□□ 1.71
SDR39U1-205ENST00000553546 TTBK1Q5TCY1 1321 aaPredicted RBP25.71■■□□□ 1.71
SDR39U1-205ENST00000553546 ABCC2Q92887 1545 aa25.7■■□□□ 1.7
SDR39U1-205ENST00000553546 UHRF1BP1LA0JNW5 1464 aa25.69■■□□□ 1.7
SDR39U1-205ENST00000553546 KIAA0556O60303 1618 aa25.68■■□□□ 1.7
SDR39U1-205ENST00000553546 PRXQ9BXM0 1461 aa25.66■■□□□ 1.7
SDR39U1-205ENST00000553546 UACAQ9BZF9 1416 aa25.66■■□□□ 1.7
SDR39U1-205ENST00000553546 PPRC1Q5VV67 1664 aaKnown RBP25.64■■□□□ 1.7
SDR39U1-205ENST00000553546 GOLGA3Q08378 1498 aa25.6■■□□□ 1.69
SDR39U1-205ENST00000553546 PLB1Q6P1J6 1458 aa25.6■■□□□ 1.69
SDR39U1-205ENST00000553546 ADGRL1O94910 1474 aa25.59■■□□□ 1.69
SDR39U1-205ENST00000553546 ASXL2Q76L83 1435 aa25.57■■□□□ 1.68
SDR39U1-205ENST00000553546 KDM5BQ9UGL1 1544 aa25.56■■□□□ 1.68
SDR39U1-205ENST00000553546 GLI2P10070 1586 aa25.52■■□□□ 1.68
SDR39U1-205ENST00000553546 EEA1Q15075 1411 aa25.51■■□□□ 1.67
SDR39U1-205ENST00000553546 ZCCHC11Q5TAX3 1644 aaKnown RBP25.5■■□□□ 1.67
SDR39U1-205ENST00000553546 HECW2Q9P2P5 1572 aa25.5■■□□□ 1.67
SDR39U1-205ENST00000553546 CSRNP3Q8WYN3 585 aa25.49■■□□□ 1.67
SDR39U1-205ENST00000553546 COL17A1Q9UMD9 1497 aaPredicted RBP25.44■■□□□ 1.66
SDR39U1-205ENST00000553546 EPRSP07814 1512 aaKnown RBP25.42■■□□□ 1.66
SDR39U1-205ENST00000553546 ABCA8O94911 1581 aa25.42■■□□□ 1.66
SDR39U1-205ENST00000553546 MAP3K4Q9Y6R4 1608 aa25.41■■□□□ 1.66
SDR39U1-205ENST00000553546 FAM9AQ8IZU1 332 aaPredicted RBP25.4■■□□□ 1.66
SDR39U1-205ENST00000553546 WDR7Q9Y4E6 1490 aa25.38■■□□□ 1.65
SDR39U1-205ENST00000553546 SAMD9Q5K651 1589 aa25.33■■□□□ 1.65
SDR39U1-205ENST00000553546 TEX14Q8IWB6 1497 aa25.33■■□□□ 1.65
SDR39U1-205ENST00000553546 KIF21BO75037 1637 aa25.26■■□□□ 1.63
SDR39U1-205ENST00000553546 P3H3Q8IVL6 736 aa25.26■■□□□ 1.63
SDR39U1-205ENST00000553546 CFAP43Q8NDM7 1665 aa25.24■■□□□ 1.63
SDR39U1-205ENST00000553546 RAPGEF6Q8TEU7 1601 aa25.2■■□□□ 1.62
SDR39U1-205ENST00000553546 CD109Q6YHK3 1445 aa25.19■■□□□ 1.62
SDR39U1-205ENST00000553546 MAGI3Q5TCQ9 1506 aa25.18■■□□□ 1.62
SDR39U1-205ENST00000553546 ATP10BO94823 1461 aa25.18■■□□□ 1.62
SDR39U1-205ENST00000553546 KCNH8Q96L42 1107 aa25.18■■□□□ 1.62
SDR39U1-205ENST00000553546 EFCAB5A4FU69 1503 aa25.15■■□□□ 1.62
SDR39U1-205ENST00000553546 CHIC1Q5VXU3 224 aa25.14■■□□□ 1.62
SDR39U1-205ENST00000553546 FHOD3Q2V2M9 1422 aa25.12■■□□□ 1.61
SDR39U1-205ENST00000553546 ARID3CA6NKF2 412 aa25.12■■□□□ 1.61
SDR39U1-205ENST00000553546 RANGAP1P46060 587 aaPredicted RBP25.11■■□□□ 1.61
SDR39U1-205ENST00000553546 NUP153P49790 1475 aaKnown RBP25.08■■□□□ 1.6
SDR39U1-205ENST00000553546 ABCA9Q8IUA7 1624 aa25.07■■□□□ 1.6
SDR39U1-205ENST00000553546 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.05■■□□□ 1.6
SDR39U1-205ENST00000553546 HNRNPUL2Q1KMD3 747 aaKnown RBP25.05■■□□□ 1.6
SDR39U1-205ENST00000553546 UBTFP17480 764 aaKnown RBP25.01■■□□□ 1.59
SDR39U1-205ENST00000553546 FBXO41Q8TF61 875 aa25■■□□□ 1.59
SDR39U1-205ENST00000553546 PHLDB1Q86UU1 1377 aa24.99■■□□□ 1.59
SDR39U1-205ENST00000553546 ARAP3Q8WWN8 1544 aa24.98■■□□□ 1.59
SDR39U1-205ENST00000553546 PLEKHD1A6NEE1 506 aa24.94■■□□□ 1.58
SDR39U1-205ENST00000553546 NEO1Q92859 1461 aa24.93■■□□□ 1.58
SDR39U1-205ENST00000553546 FMN1Q68DA7 1419 aa24.92■■□□□ 1.58
SDR39U1-205ENST00000553546 ADAMTSL3P82987 1691 aa24.91■■□□□ 1.58
SDR39U1-205ENST00000553546 EHMT2Q96KQ7 1210 aa24.91■■□□□ 1.58
SDR39U1-205ENST00000553546 ARHGAP35Q9NRY4 1499 aa24.89■■□□□ 1.57
SDR39U1-205ENST00000553546 PTPRMP28827 1452 aa24.87■■□□□ 1.57
SDR39U1-205ENST00000553546 HECW1Q76N89 1606 aa24.86■■□□□ 1.57
SDR39U1-205ENST00000553546 CDK13Q14004 1512 aaKnown RBP24.84■■□□□ 1.57
SDR39U1-205ENST00000553546 CFAP74Q9C0B2 1584 aa24.83■■□□□ 1.57
SDR39U1-205ENST00000553546 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.82■■□□□ 1.56
SDR39U1-205ENST00000553546 PCF11O94913 1555 aaKnown RBP24.8■■□□□ 1.56
SDR39U1-205ENST00000553546 MADDQ8WXG6 1647 aa24.79■■□□□ 1.56
SDR39U1-205ENST00000553546 BCORL1Q5H9F3 1711 aa24.78■■□□□ 1.56
SDR39U1-205ENST00000553546 TTC37Q6PGP7 1564 aa24.78■■□□□ 1.56
SDR39U1-205ENST00000553546 FANCAO15360 1455 aa24.77■■□□□ 1.56
SDR39U1-205ENST00000553546 RAPGEF3O95398 923 aa24.76■■□□□ 1.55
SDR39U1-205ENST00000553546 ATP1B4Q9UN42 357 aaPredicted RBP24.76■■□□□ 1.55
SDR39U1-205ENST00000553546 LMTK3Q96Q04 1460 aa24.76■■□□□ 1.55
SDR39U1-205ENST00000553546 FRMPD1Q5SYB0 1578 aa24.76■■□□□ 1.55
SDR39U1-205ENST00000553546 CDK11AQ9UQ88 783 aaPredicted RBP24.75■■□□□ 1.55
SDR39U1-205ENST00000553546 AKNAQ7Z591 1439 aa24.74■■□□□ 1.55
SDR39U1-205ENST00000553546 DENND4BO75064 1496 aaPredicted RBP24.74■■□□□ 1.55
SDR39U1-205ENST00000553546 RICTORQ6R327 1708 aa24.7■■□□□ 1.54
SDR39U1-205ENST00000553546 PLCH2O75038 1416 aa24.68■■□□□ 1.54
SDR39U1-205ENST00000553546 KIF14Q15058 1648 aa24.67■■□□□ 1.54
SDR39U1-205ENST00000553546 ARHGEF40Q8TER5 1519 aa24.66■■□□□ 1.54
SDR39U1-205ENST00000553546 RIMS1Q86UR5 1692 aaKnown RBP24.66■■□□□ 1.54
SDR39U1-205ENST00000553546 CLIP1P30622 1438 aa24.66■■□□□ 1.54
SDR39U1-205ENST00000553546 TROQ12816 1431 aaPredicted RBP24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms