RNA–Protein interactions for RNA: ENST00000553391.2

MTHFD1-203, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-203ENST00000553391 ERCC6Q03468 1493 aa14.32□□□□□ -0.12
MTHFD1-203ENST00000553391 P3H3Q8IVL6 736 aa14.32□□□□□ -0.12
MTHFD1-203ENST00000553391 GRIN2BQ13224 1484 aa14.31□□□□□ -0.12
MTHFD1-203ENST00000553391 MAP3K1Q13233 1512 aa14.29□□□□□ -0.12
MTHFD1-203ENST00000553391 ZNF608Q9ULD9 1512 aaPredicted RBP14.29□□□□□ -0.12
MTHFD1-203ENST00000553391 EFCAB5A4FU69 1503 aa14.25□□□□□ -0.13
MTHFD1-203ENST00000553391 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.24□□□□□ -0.13
MTHFD1-203ENST00000553391 THOC2Q8NI27 1593 aaKnown RBP14.24□□□□□ -0.13
MTHFD1-203ENST00000553391 FHOD3Q2V2M9 1422 aa14.24□□□□□ -0.13
MTHFD1-203ENST00000553391 CASKIN1Q8WXD9 1431 aa14.22□□□□□ -0.13
MTHFD1-203ENST00000553391 HNRNPUL2Q1KMD3 747 aaKnown RBP14.21□□□□□ -0.13
MTHFD1-203ENST00000553391 CCER1Q8TC90 406 aaPredicted RBP14.2□□□□□ -0.14
MTHFD1-203ENST00000553391 ADAMTS12P58397 1594 aa14.2□□□□□ -0.14
MTHFD1-203ENST00000553391 PBRM1Q86U86 1689 aa14.2□□□□□ -0.14
MTHFD1-203ENST00000553391 FMN1Q68DA7 1419 aa14.19□□□□□ -0.14
MTHFD1-203ENST00000553391 CTTNBP2Q8WZ74 1663 aa14.19□□□□□ -0.14
MTHFD1-203ENST00000553391 RRBP1Q9P2E9 1410 aaKnown RBP14.18□□□□□ -0.14
MTHFD1-203ENST00000553391 LRRC9Q6ZRR7 1453 aa14.17□□□□□ -0.14
MTHFD1-203ENST00000553391 SAMD9Q5K651 1589 aa14.17□□□□□ -0.14
MTHFD1-203ENST00000553391 ATP1B4Q9UN42 357 aaPredicted RBP14.16□□□□□ -0.14
MTHFD1-203ENST00000553391 SNAPC4Q5SXM2 1469 aa14.16□□□□□ -0.14
MTHFD1-203ENST00000553391 TIAM1Q13009 1591 aa14.16□□□□□ -0.14
MTHFD1-203ENST00000553391 KIAA0586Q9BVV6 1533 aa14.15□□□□□ -0.14
MTHFD1-203ENST00000553391 FYCO1Q9BQS8 1478 aa14.14□□□□□ -0.15
MTHFD1-203ENST00000553391 CHMP7Q8WUX9 453 aaPredicted RBP14.14□□□□□ -0.15
MTHFD1-203ENST00000553391 MAGI1Q96QZ7 1491 aaPredicted RBP14.13□□□□□ -0.15
MTHFD1-203ENST00000553391 GRIN2AQ12879 1464 aa14.12□□□□□ -0.15
MTHFD1-203ENST00000553391 CCNB3Q8WWL7 1395 aa14.11□□□□□ -0.15
MTHFD1-203ENST00000553391 UGGT2Q9NYU1 1516 aa14.11□□□□□ -0.15
MTHFD1-203ENST00000553391 EIF4G3O43432 1585 aaKnown RBP14.11□□□□□ -0.15
MTHFD1-203ENST00000553391 SYNJ2O15056 1496 aa14.1□□□□□ -0.15
MTHFD1-203ENST00000553391 PCF11O94913 1555 aaKnown RBP14.09□□□□□ -0.15
MTHFD1-203ENST00000553391 IQGAP2Q13576 1575 aa14.09□□□□□ -0.15
MTHFD1-203ENST00000553391 PHLDB1Q86UU1 1377 aa14.08□□□□□ -0.16
MTHFD1-203ENST00000553391 JPH4Q96JJ6 628 aa14.06□□□□□ -0.16
MTHFD1-203ENST00000553391 FBLN2P98095 1184 aa14.05□□□□□ -0.16
MTHFD1-203ENST00000553391 NUP160Q12769 1436 aa14.05□□□□□ -0.16
MTHFD1-203ENST00000553391 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.04□□□□□ -0.16
MTHFD1-203ENST00000553391 DISP1Q96F81 1524 aa14.04□□□□□ -0.16
MTHFD1-203ENST00000553391 CFAP43Q8NDM7 1665 aa14.03□□□□□ -0.16
MTHFD1-203ENST00000553391 MTUS2Q5JR59 1369 aa14□□□□□ -0.17
MTHFD1-203ENST00000553391 CEP170Q5SW79 1584 aa13.99□□□□□ -0.17
MTHFD1-203ENST00000553391 CLSPNQ9HAW4 1339 aa13.97□□□□□ -0.17
MTHFD1-203ENST00000553391 FAM50AQ14320 339 aaKnown RBP13.97□□□□□ -0.17
MTHFD1-203ENST00000553391 CCDC18Q5T9S5 1454 aa13.97□□□□□ -0.17
MTHFD1-203ENST00000553391 ITGAEP38570 1179 aa13.96□□□□□ -0.17
MTHFD1-203ENST00000553391 EPRSP07814 1512 aaKnown RBP13.95□□□□□ -0.18
MTHFD1-203ENST00000553391 KIAA0556O60303 1618 aa13.95□□□□□ -0.18
MTHFD1-203ENST00000553391 CARMIL2Q6F5E8 1435 aa13.95□□□□□ -0.18
MTHFD1-203ENST00000553391 DHX57Q6P158 1386 aaKnown RBP13.95□□□□□ -0.18
MTHFD1-203ENST00000553391 NCOA2Q15596 1464 aa13.93□□□□□ -0.18
MTHFD1-203ENST00000553391 FGD6Q6ZV73 1430 aa13.92□□□□□ -0.18
MTHFD1-203ENST00000553391 SETD5Q9C0A6 1442 aa13.92□□□□□ -0.18
MTHFD1-203ENST00000553391 ARHGEF11O15085 1522 aa13.92□□□□□ -0.18
MTHFD1-203ENST00000553391 LRRIQ1Q96JM4 1722 aa13.92□□□□□ -0.18
MTHFD1-203ENST00000553391 MAGI3Q5TCQ9 1506 aa13.91□□□□□ -0.18
MTHFD1-203ENST00000553391 HECW1Q76N89 1606 aa13.91□□□□□ -0.18
MTHFD1-203ENST00000553391 MYOM3Q5VTT5 1437 aa13.9□□□□□ -0.18
MTHFD1-203ENST00000553391 EHBP1L1Q8N3D4 1523 aa13.9□□□□□ -0.18
MTHFD1-203ENST00000553391 CDK11AQ9UQ88 783 aaPredicted RBP13.9□□□□□ -0.18
MTHFD1-203ENST00000553391 NUP153P49790 1475 aaKnown RBP13.89□□□□□ -0.19
MTHFD1-203ENST00000553391 RAB3GAP2Q9H2M9 1393 aa13.88□□□□□ -0.19
MTHFD1-203ENST00000553391 CDK13Q14004 1512 aaKnown RBP13.86□□□□□ -0.19
MTHFD1-203ENST00000553391 ARID3CA6NKF2 412 aa13.86□□□□□ -0.19
MTHFD1-203ENST00000553391 PTPRKQ15262 1439 aa13.85□□□□□ -0.19
MTHFD1-203ENST00000553391 PRG4Q92954 1404 aaPredicted RBP13.85□□□□□ -0.19
MTHFD1-203ENST00000553391 MIA2Q96PC5 1412 aa13.85□□□□□ -0.19
MTHFD1-203ENST00000553391 SUPT6HQ7KZ85 1726 aaKnown RBP13.84□□□□□ -0.19
MTHFD1-203ENST00000553391 RAPGEF6Q8TEU7 1601 aa13.84□□□□□ -0.19
MTHFD1-203ENST00000553391 TCOF1Q13428 1488 aaKnown RBP13.84□□□□□ -0.19
MTHFD1-203ENST00000553391 PLB1Q6P1J6 1458 aa13.84□□□□□ -0.19
MTHFD1-203ENST00000553391 PTPRGP23470 1445 aa13.83□□□□□ -0.2
MTHFD1-203ENST00000553391 PLEKHD1A6NEE1 506 aa13.81□□□□□ -0.2
MTHFD1-203ENST00000553391 TROQ12816 1431 aaPredicted RBP13.81□□□□□ -0.2
MTHFD1-203ENST00000553391 ABCA8O94911 1581 aa13.8□□□□□ -0.2
MTHFD1-203ENST00000553391 ATP10BO94823 1461 aa13.8□□□□□ -0.2
MTHFD1-203ENST00000553391 ZNF316A6NFI3 1004 aaPredicted RBP13.78□□□□□ -0.2
MTHFD1-203ENST00000553391 SENP3Q9H4L4 574 aaPredicted RBP13.78□□□□□ -0.2
MTHFD1-203ENST00000553391 PTPN23Q9H3S7 1636 aa13.76□□□□□ -0.21
MTHFD1-203ENST00000553391 HFM1A2PYH4 1435 aa13.76□□□□□ -0.21
MTHFD1-203ENST00000553391 NAIPQ13075 1403 aa13.75□□□□□ -0.21
MTHFD1-203ENST00000553391 CHD1O14646 1710 aa13.74□□□□□ -0.21
MTHFD1-203ENST00000553391 SHROOM2Q13796 1616 aa13.74□□□□□ -0.21
MTHFD1-203ENST00000553391 UACAQ9BZF9 1416 aa13.73□□□□□ -0.21
MTHFD1-203ENST00000553391 ZNF644Q9H582 1327 aaPredicted RBP13.73□□□□□ -0.21
MTHFD1-203ENST00000553391 TIMELESSQ9UNS1 1208 aa13.73□□□□□ -0.21
MTHFD1-203ENST00000553391 CFDP1Q9UEE9 299 aaPredicted RBP13.72□□□□□ -0.21
MTHFD1-203ENST00000553391 CHIC2Q9UKJ5 165 aa13.72□□□□□ -0.21
MTHFD1-203ENST00000553391 GPATCH8Q9UKJ3 1502 aaKnown RBP13.72□□□□□ -0.21
MTHFD1-203ENST00000553391 RRP7BPQ9NSQ0 103 aa13.71□□□□□ -0.21
MTHFD1-203ENST00000553391 MAPKBP1O60336 1514 aa13.7□□□□□ -0.22
MTHFD1-203ENST00000553391 ACIN1Q9UKV3 1341 aaKnown RBP13.7□□□□□ -0.22
MTHFD1-203ENST00000553391 SIN3AQ96ST3 1273 aa13.7□□□□□ -0.22
MTHFD1-203ENST00000553391 ABCC5O15440 1437 aa13.7□□□□□ -0.22
MTHFD1-203ENST00000553391 AKNAQ7Z591 1439 aa13.7□□□□□ -0.22
MTHFD1-203ENST00000553391 ROCK1Q13464 1354 aa13.7□□□□□ -0.22
MTHFD1-203ENST00000553391 CLASP1Q7Z460 1538 aa13.69□□□□□ -0.22
MTHFD1-203ENST00000553391 ABCC10Q5T3U5 1492 aa13.68□□□□□ -0.22
MTHFD1-203ENST00000553391 DAPK1P53355 1430 aa13.66□□□□□ -0.22
MTHFD1-203ENST00000553391 ADCY10Q96PN6 1610 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms