RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 KIAA0586Q9BVV6 1533 aa32.97■■■□□ 2.87
PTCH1-227ENST00000553256 JPH4Q96JJ6 628 aa32.96■■■□□ 2.87
PTCH1-227ENST00000553256 PRG4Q92954 1404 aaPredicted RBP32.91■■■□□ 2.86
PTCH1-227ENST00000553256 RAPGEF2Q9Y4G8 1499 aa32.85■■■□□ 2.85
PTCH1-227ENST00000553256 PRXQ9BXM0 1461 aa32.79■■■□□ 2.84
PTCH1-227ENST00000553256 IQGAP2Q13576 1575 aa32.69■■■□□ 2.82
PTCH1-227ENST00000553256 CHIC1Q5VXU3 224 aa32.63■■■□□ 2.81
PTCH1-227ENST00000553256 DISP1Q96F81 1524 aa32.6■■■□□ 2.81
PTCH1-227ENST00000553256 UGGT2Q9NYU1 1516 aa32.6■■■□□ 2.81
PTCH1-227ENST00000553256 CSRNP3Q8WYN3 585 aa32.58■■■□□ 2.81
PTCH1-227ENST00000553256 EEA1Q15075 1411 aa32.58■■■□□ 2.81
PTCH1-227ENST00000553256 CARMIL2Q6F5E8 1435 aa32.51■■■□□ 2.79
PTCH1-227ENST00000553256 TNIKQ9UKE5 1360 aa32.49■■■□□ 2.79
PTCH1-227ENST00000553256 ADCY10Q96PN6 1610 aa32.49■■■□□ 2.79
PTCH1-227ENST00000553256 CTTNBP2Q8WZ74 1663 aa32.47■■■□□ 2.79
PTCH1-227ENST00000553256 PTPRGP23470 1445 aa32.47■■■□□ 2.79
PTCH1-227ENST00000553256 TRHP20396 242 aaPredicted RBP32.44■■■□□ 2.78
PTCH1-227ENST00000553256 KIAA0556O60303 1618 aa32.42■■■□□ 2.78
PTCH1-227ENST00000553256 MAPKBP1O60336 1514 aa32.34■■■□□ 2.77
PTCH1-227ENST00000553256 UHRF1BP1LA0JNW5 1464 aa32.34■■■□□ 2.77
PTCH1-227ENST00000553256 FAM9AQ8IZU1 332 aaPredicted RBP32.29■■■□□ 2.76
PTCH1-227ENST00000553256 KIF21BO75037 1637 aa32.29■■■□□ 2.76
PTCH1-227ENST00000553256 UACAQ9BZF9 1416 aa32.28■■■□□ 2.76
PTCH1-227ENST00000553256 GOLGA3Q08378 1498 aa32.27■■■□□ 2.76
PTCH1-227ENST00000553256 ABCC2Q92887 1545 aa32.26■■■□□ 2.76
PTCH1-227ENST00000553256 ABCC10Q5T3U5 1492 aa32.22■■■□□ 2.75
PTCH1-227ENST00000553256 TTBK1Q5TCY1 1321 aaPredicted RBP32.21■■■□□ 2.75
PTCH1-227ENST00000553256 NPM1P06748 294 aaKnown RBP eCLIP32.2■■■□□ 2.75
PTCH1-227ENST00000553256 KIF13AQ9H1H9 1805 aa32.2■■■□□ 2.75
PTCH1-227ENST00000553256 KDM5BQ9UGL1 1544 aa32.18■■■□□ 2.74
PTCH1-227ENST00000553256 SAMD9Q5K651 1589 aa32.18■■■□□ 2.74
PTCH1-227ENST00000553256 PLB1Q6P1J6 1458 aa32.14■■■□□ 2.74
PTCH1-227ENST00000553256 ABCA8O94911 1581 aa32.14■■■□□ 2.74
PTCH1-227ENST00000553256 DIP2BQ9P265 1576 aa32.14■■■□□ 2.74
PTCH1-227ENST00000553256 ASXL2Q76L83 1435 aa32.06■■■□□ 2.72
PTCH1-227ENST00000553256 FAM69CQ0P6D2 419 aa32.04■■■□□ 2.72
PTCH1-227ENST00000553256 ZCCHC11Q5TAX3 1644 aaKnown RBP32.01■■■□□ 2.72
PTCH1-227ENST00000553256 P3H3Q8IVL6 736 aa32■■■□□ 2.71
PTCH1-227ENST00000553256 GLI2P10070 1586 aa31.95■■■□□ 2.71
PTCH1-227ENST00000553256 EFCAB5A4FU69 1503 aa31.92■■■□□ 2.7
PTCH1-227ENST00000553256 FHOD3Q2V2M9 1422 aa31.92■■■□□ 2.7
PTCH1-227ENST00000553256 EPRSP07814 1512 aaKnown RBP31.9■■■□□ 2.7
PTCH1-227ENST00000553256 ATP10BO94823 1461 aa31.86■■■□□ 2.69
PTCH1-227ENST00000553256 WDR7Q9Y4E6 1490 aa31.85■■■□□ 2.69
PTCH1-227ENST00000553256 UBTFP17480 764 aaKnown RBP31.85■■■□□ 2.69
PTCH1-227ENST00000553256 RAPGEF6Q8TEU7 1601 aa31.82■■■□□ 2.69
PTCH1-227ENST00000553256 RANGAP1P46060 587 aaPredicted RBP31.82■■■□□ 2.68
PTCH1-227ENST00000553256 EHMT2Q96KQ7 1210 aa31.82■■■□□ 2.68
PTCH1-227ENST00000553256 NUP153P49790 1475 aaKnown RBP31.81■■■□□ 2.68
PTCH1-227ENST00000553256 ARHGAP35Q9NRY4 1499 aa31.81■■■□□ 2.68
PTCH1-227ENST00000553256 PPRC1Q5VV67 1664 aaKnown RBP31.8■■■□□ 2.68
PTCH1-227ENST00000553256 MAP3K4Q9Y6R4 1608 aa31.77■■■□□ 2.68
PTCH1-227ENST00000553256 TSPOAP1O95153 1857 aa31.69■■■□□ 2.66
PTCH1-227ENST00000553256 ARID3CA6NKF2 412 aa31.67■■■□□ 2.66
PTCH1-227ENST00000553256 FMN1Q68DA7 1419 aa31.6■■■□□ 2.65
PTCH1-227ENST00000553256 MAGI3Q5TCQ9 1506 aa31.59■■■□□ 2.65
PTCH1-227ENST00000553256 COL17A1Q9UMD9 1497 aaPredicted RBP31.59■■■□□ 2.65
PTCH1-227ENST00000553256 CFAP43Q8NDM7 1665 aa31.58■■■□□ 2.65
PTCH1-227ENST00000553256 KDM6BO15054 1643 aa31.58■■■□□ 2.65
PTCH1-227ENST00000553256 KCNH8Q96L42 1107 aa31.58■■■□□ 2.65
PTCH1-227ENST00000553256 CD109Q6YHK3 1445 aa31.56■■■□□ 2.64
PTCH1-227ENST00000553256 TEX14Q8IWB6 1497 aa31.53■■■□□ 2.64
PTCH1-227ENST00000553256 ABCA9Q8IUA7 1624 aa31.53■■■□□ 2.64
PTCH1-227ENST00000553256 CDK13Q14004 1512 aaKnown RBP31.49■■■□□ 2.63
PTCH1-227ENST00000553256 HECW1Q76N89 1606 aa31.46■■■□□ 2.63
PTCH1-227ENST00000553256 CLIP1P30622 1438 aa31.45■■■□□ 2.63
PTCH1-227ENST00000553256 PLEKHD1A6NEE1 506 aa31.42■■■□□ 2.62
PTCH1-227ENST00000553256 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.42■■■□□ 2.62
PTCH1-227ENST00000553256 HNRNPUL2Q1KMD3 747 aaKnown RBP31.42■■■□□ 2.62
PTCH1-227ENST00000553256 CASKIN1Q8WXD9 1431 aa31.4■■■□□ 2.62
PTCH1-227ENST00000553256 LRRIQ1Q96JM4 1722 aa31.38■■■□□ 2.61
PTCH1-227ENST00000553256 PCF11O94913 1555 aaKnown RBP31.35■■■□□ 2.61
PTCH1-227ENST00000553256 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.35■■■□□ 2.61
PTCH1-227ENST00000553256 ARAP3Q8WWN8 1544 aa31.33■■■□□ 2.61
PTCH1-227ENST00000553256 TTC37Q6PGP7 1564 aa31.29■■■□□ 2.6
PTCH1-227ENST00000553256 NEO1Q92859 1461 aa31.28■■■□□ 2.6
PTCH1-227ENST00000553256 PHLDB1Q86UU1 1377 aa31.28■■■□□ 2.6
PTCH1-227ENST00000553256 FYCO1Q9BQS8 1478 aa31.27■■■□□ 2.6
PTCH1-227ENST00000553256 CEP162Q5TB80 1403 aa31.27■■■□□ 2.6
PTCH1-227ENST00000553256 TROQ12816 1431 aaPredicted RBP31.25■■■□□ 2.59
PTCH1-227ENST00000553256 LOC105371045A0A1W2PR82 267 aa31.25■■■□□ 2.59
PTCH1-227ENST00000553256 ATP1B4Q9UN42 357 aaPredicted RBP31.24■■■□□ 2.59
PTCH1-227ENST00000553256 CCDC18Q5T9S5 1454 aa31.22■■■□□ 2.59
PTCH1-227ENST00000553256 CDK11AQ9UQ88 783 aaPredicted RBP31.19■■■□□ 2.58
PTCH1-227ENST00000553256 KIF14Q15058 1648 aa31.19■■■□□ 2.58
PTCH1-227ENST00000553256 PLCH2O75038 1416 aa31.17■■■□□ 2.58
PTCH1-227ENST00000553256 FRMPD1Q5SYB0 1578 aa31.14■■■□□ 2.58
PTCH1-227ENST00000553256 FANCAO15360 1455 aa31.14■■■□□ 2.57
PTCH1-227ENST00000553256 AKNAQ7Z591 1439 aa31.12■■■□□ 2.57
PTCH1-227ENST00000553256 KDM4FA0A1W2PPD8 638 aa31.1■■■□□ 2.57
PTCH1-227ENST00000553256 RAPGEF3O95398 923 aa31.08■■■□□ 2.57
PTCH1-227ENST00000553256 CFAP74Q9C0B2 1584 aa31.06■■■□□ 2.56
PTCH1-227ENST00000553256 RICTORQ6R327 1708 aa31.02■■■□□ 2.56
PTCH1-227ENST00000553256 DENND4BO75064 1496 aaPredicted RBP31.01■■■□□ 2.56
PTCH1-227ENST00000553256 MYO5CQ9NQX4 1742 aa31.01■■■□□ 2.56
PTCH1-227ENST00000553256 ADGRL1O94910 1474 aa30.95■■■□□ 2.55
PTCH1-227ENST00000553256 EFCAB2Q5VUJ9 269 aa30.95■■■□□ 2.55
PTCH1-227ENST00000553256 ZMYM4Q5VZL5 1548 aa30.94■■■□□ 2.54
PTCH1-227ENST00000553256 CDC42BPBQ9Y5S2 1711 aa30.94■■■□□ 2.54
PTCH1-227ENST00000553256 VPS8Q8N3P4 1428 aa30.93■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms