RNA–Protein interactions for RNA: ENST00000553217.5

TMEM106C-221, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-221ENST00000553217 NUP160Q12769 1436 aa8.73□□□□□ -1.01
TMEM106C-221ENST00000553217 TRIM26Q12899 539 aaPredicted RBP8.73□□□□□ -1.01
TMEM106C-221ENST00000553217 FHAD1B1AJZ9 1412 aa8.71□□□□□ -1.01
TMEM106C-221ENST00000553217 SHROOM2Q13796 1616 aa8.7□□□□□ -1.02
TMEM106C-221ENST00000553217 PRG4Q92954 1404 aaPredicted RBP8.69□□□□□ -1.02
TMEM106C-221ENST00000553217 ERICH3Q5RHP9 1530 aa8.69□□□□□ -1.02
TMEM106C-221ENST00000553217 RUSC2Q8N2Y8 1516 aa8.68□□□□□ -1.02
TMEM106C-221ENST00000553217 CENPBP07199 599 aaPredicted RBP8.67□□□□□ -1.02
TMEM106C-221ENST00000553217 CLSPNQ9HAW4 1339 aa8.66□□□□□ -1.02
TMEM106C-221ENST00000553217 KIF13AQ9H1H9 1805 aa8.66□□□□□ -1.02
TMEM106C-221ENST00000553217 JPH4Q96JJ6 628 aa8.64□□□□□ -1.03
TMEM106C-221ENST00000553217 PCGF6Q9BYE7 350 aa8.64□□□□□ -1.03
TMEM106C-221ENST00000553217 ADCY10Q96PN6 1610 aa8.62□□□□□ -1.03
TMEM106C-221ENST00000553217 IGF1RP08069 1367 aa8.61□□□□□ -1.03
TMEM106C-221ENST00000553217 TSPOAP1O95153 1857 aa8.6□□□□□ -1.03
TMEM106C-221ENST00000553217 FAM69CQ0P6D2 419 aa8.59□□□□□ -1.03
TMEM106C-221ENST00000553217 KIF27Q86VH2 1401 aa8.58□□□□□ -1.04
TMEM106C-221ENST00000553217 CUL7Q14999 1698 aa8.57□□□□□ -1.04
TMEM106C-221ENST00000553217 DIP2BQ9P265 1576 aa8.56□□□□□ -1.04
TMEM106C-221ENST00000553217 KIAA0586Q9BVV6 1533 aa8.56□□□□□ -1.04
TMEM106C-221ENST00000553217 CARMIL1Q5VZK9 1371 aa8.56□□□□□ -1.04
TMEM106C-221ENST00000553217 ABCC10Q5T3U5 1492 aa8.55□□□□□ -1.04
TMEM106C-221ENST00000553217 NPM1P06748 294 aaKnown RBP eCLIP8.54□□□□□ -1.04
TMEM106C-221ENST00000553217 PLPPR3Q6T4P5 718 aa8.52□□□□□ -1.05
TMEM106C-221ENST00000553217 MAPKBP1O60336 1514 aa8.52□□□□□ -1.05
TMEM106C-221ENST00000553217 PTPRGP23470 1445 aa8.52□□□□□ -1.05
TMEM106C-221ENST00000553217 IQGAP2Q13576 1575 aa8.52□□□□□ -1.05
TMEM106C-221ENST00000553217 KDM6BO15054 1643 aa8.51□□□□□ -1.05
TMEM106C-221ENST00000553217 SENP3Q9H4L4 574 aaPredicted RBP8.5□□□□□ -1.05
TMEM106C-221ENST00000553217 ABCC2Q92887 1545 aa8.49□□□□□ -1.05
TMEM106C-221ENST00000553217 DISP1Q96F81 1524 aa8.49□□□□□ -1.05
TMEM106C-221ENST00000553217 PPRC1Q5VV67 1664 aaKnown RBP8.49□□□□□ -1.05
TMEM106C-221ENST00000553217 TNIKQ9UKE5 1360 aa8.48□□□□□ -1.05
TMEM106C-221ENST00000553217 ASXL2Q76L83 1435 aa8.47□□□□□ -1.05
TMEM106C-221ENST00000553217 RAPGEF2Q9Y4G8 1499 aa8.47□□□□□ -1.05
TMEM106C-221ENST00000553217 ARID3CA6NKF2 412 aa8.47□□□□□ -1.05
TMEM106C-221ENST00000553217 KIAA0556O60303 1618 aa8.47□□□□□ -1.05
TMEM106C-221ENST00000553217 CARMIL2Q6F5E8 1435 aa8.46□□□□□ -1.05
TMEM106C-221ENST00000553217 KDM4FA0A1W2PPD8 638 aa8.46□□□□□ -1.06
TMEM106C-221ENST00000553217 ACIN1Q9UKV3 1341 aaKnown RBP8.46□□□□□ -1.06
TMEM106C-221ENST00000553217 ZCCHC11Q5TAX3 1644 aaKnown RBP8.45□□□□□ -1.06
TMEM106C-221ENST00000553217 UACAQ9BZF9 1416 aa8.45□□□□□ -1.06
TMEM106C-221ENST00000553217 P3H3Q8IVL6 736 aa8.44□□□□□ -1.06
TMEM106C-221ENST00000553217 PLB1Q6P1J6 1458 aa8.44□□□□□ -1.06
TMEM106C-221ENST00000553217 COL17A1Q9UMD9 1497 aaPredicted RBP8.44□□□□□ -1.06
TMEM106C-221ENST00000553217 CTTNBP2Q8WZ74 1663 aa8.43□□□□□ -1.06
TMEM106C-221ENST00000553217 RANGAP1P46060 587 aaPredicted RBP8.43□□□□□ -1.06
TMEM106C-221ENST00000553217 UGGT2Q9NYU1 1516 aa8.43□□□□□ -1.06
TMEM106C-221ENST00000553217 EPRSP07814 1512 aaKnown RBP8.42□□□□□ -1.06
TMEM106C-221ENST00000553217 SCAF1Q9H7N4 1312 aaKnown RBP8.41□□□□□ -1.06
TMEM106C-221ENST00000553217 EHMT2Q96KQ7 1210 aa8.41□□□□□ -1.06
TMEM106C-221ENST00000553217 KDM5BQ9UGL1 1544 aa8.4□□□□□ -1.06
TMEM106C-221ENST00000553217 UHRF1BP1LA0JNW5 1464 aa8.4□□□□□ -1.06
TMEM106C-221ENST00000553217 KCNH8Q96L42 1107 aa8.4□□□□□ -1.06
TMEM106C-221ENST00000553217 MAP3K4Q9Y6R4 1608 aa8.4□□□□□ -1.07
TMEM106C-221ENST00000553217 GLI2P10070 1586 aa8.39□□□□□ -1.07
TMEM106C-221ENST00000553217 FAM9AQ8IZU1 332 aaPredicted RBP8.39□□□□□ -1.07
TMEM106C-221ENST00000553217 ADGRL1O94910 1474 aa8.38□□□□□ -1.07
TMEM106C-221ENST00000553217 ABCA8O94911 1581 aa8.37□□□□□ -1.07
TMEM106C-221ENST00000553217 PRXQ9BXM0 1461 aa8.37□□□□□ -1.07
TMEM106C-221ENST00000553217 WDR7Q9Y4E6 1490 aa8.37□□□□□ -1.07
TMEM106C-221ENST00000553217 PPARGC1BQ86YN6 1023 aaKnown RBP8.33□□□□□ -1.08
TMEM106C-221ENST00000553217 KIF21BO75037 1637 aa8.32□□□□□ -1.08
TMEM106C-221ENST00000553217 FHOD3Q2V2M9 1422 aa8.32□□□□□ -1.08
TMEM106C-221ENST00000553217 CD109Q6YHK3 1445 aa8.32□□□□□ -1.08
TMEM106C-221ENST00000553217 GOLGA3Q08378 1498 aa8.32□□□□□ -1.08
TMEM106C-221ENST00000553217 TEX14Q8IWB6 1497 aa8.32□□□□□ -1.08
TMEM106C-221ENST00000553217 CFAP43Q8NDM7 1665 aa8.31□□□□□ -1.08
TMEM106C-221ENST00000553217 MYT1LQ9UL68 1186 aa8.31□□□□□ -1.08
TMEM106C-221ENST00000553217 ATP10BO94823 1461 aa8.31□□□□□ -1.08
TMEM106C-221ENST00000553217 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.3□□□□□ -1.08
TMEM106C-221ENST00000553217 HNRNPUL2Q1KMD3 747 aaKnown RBP8.3□□□□□ -1.08
TMEM106C-221ENST00000553217 CSRNP3Q8WYN3 585 aa8.29□□□□□ -1.08
TMEM106C-221ENST00000553217 SAMD9Q5K651 1589 aa8.29□□□□□ -1.08
TMEM106C-221ENST00000553217 HECW2Q9P2P5 1572 aa8.29□□□□□ -1.08
TMEM106C-221ENST00000553217 RAPGEF6Q8TEU7 1601 aa8.29□□□□□ -1.08
TMEM106C-221ENST00000553217 RAPGEF3O95398 923 aa8.27□□□□□ -1.09
TMEM106C-221ENST00000553217 MAGI3Q5TCQ9 1506 aa8.27□□□□□ -1.09
TMEM106C-221ENST00000553217 DIEXFQ68CQ4 756 aaKnown RBP8.26□□□□□ -1.09
TMEM106C-221ENST00000553217 ERICH6Q7L0X2 663 aa8.26□□□□□ -1.09
TMEM106C-221ENST00000553217 ILDR1Q86SU0 546 aaPredicted RBP8.26□□□□□ -1.09
TMEM106C-221ENST00000553217 NUP153P49790 1475 aaKnown RBP8.26□□□□□ -1.09
TMEM106C-221ENST00000553217 ABCA9Q8IUA7 1624 aa8.25□□□□□ -1.09
TMEM106C-221ENST00000553217 CDK13Q14004 1512 aaKnown RBP8.24□□□□□ -1.09
TMEM106C-221ENST00000553217 FRMPD1Q5SYB0 1578 aa8.24□□□□□ -1.09
TMEM106C-221ENST00000553217 GTF3C3Q9Y5Q9 886 aa8.24□□□□□ -1.09
TMEM106C-221ENST00000553217 TTC37Q6PGP7 1564 aa8.22□□□□□ -1.09
TMEM106C-221ENST00000553217 ATP1B4Q9UN42 357 aaPredicted RBP8.22□□□□□ -1.09
TMEM106C-221ENST00000553217 SIGLEC1Q9BZZ2 1709 aa8.21□□□□□ -1.09
TMEM106C-221ENST00000553217 EEA1Q15075 1411 aa8.2□□□□□ -1.1
TMEM106C-221ENST00000553217 MADDQ8WXG6 1647 aa8.2□□□□□ -1.1
TMEM106C-221ENST00000553217 ARID4BQ4LE39 1312 aaPredicted RBP8.2□□□□□ -1.1
TMEM106C-221ENST00000553217 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.19□□□□□ -1.1
TMEM106C-221ENST00000553217 ARAP3Q8WWN8 1544 aa8.19□□□□□ -1.1
TMEM106C-221ENST00000553217 CCER1Q8TC90 406 aaPredicted RBP8.19□□□□□ -1.1
TMEM106C-221ENST00000553217 ADAMTSL3P82987 1691 aa8.18□□□□□ -1.1
TMEM106C-221ENST00000553217 RIMS1Q86UR5 1692 aaKnown RBP8.18□□□□□ -1.1
TMEM106C-221ENST00000553217 UBTFP17480 764 aaKnown RBP8.18□□□□□ -1.1
TMEM106C-221ENST00000553217 MLECQ14165 292 aa8.18□□□□□ -1.1
TMEM106C-221ENST00000553217 YEATS2Q9ULM3 1422 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms