RNA–Protein interactions for RNA: ENST00000553200.1

NR4A1-218, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 3

Gene NR4A1, Length 521 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-218ENST00000553200 ERCC6L2Q5T890 1561 aa40.41■■■■■ 4.06
NR4A1-218ENST00000553200 PRXQ9BXM0 1461 aa40.38■■■■■ 4.05
NR4A1-218ENST00000553200 KIAA0586Q9BVV6 1533 aa40.37■■■■■ 4.05
NR4A1-218ENST00000553200 EEA1Q15075 1411 aa40.34■■■■■ 4.05
NR4A1-218ENST00000553200 CSRNP3Q8WYN3 585 aa40.31■■■■■ 4.04
NR4A1-218ENST00000553200 JPH4Q96JJ6 628 aa40.3■■■■■ 4.04
NR4A1-218ENST00000553200 FAM9AQ8IZU1 332 aaPredicted RBP40.29■■■■■ 4.04
NR4A1-218ENST00000553200 CYB5RLQ6IPT4 315 aa40.28■■■■■ 4.04
NR4A1-218ENST00000553200 PRG4Q92954 1404 aaPredicted RBP40.25■■■■■ 4.03
NR4A1-218ENST00000553200 IQGAP2Q13576 1575 aa40.21■■■■■ 4.03
NR4A1-218ENST00000553200 CTTNBP2Q8WZ74 1663 aa40.18■■■■■ 4.02
NR4A1-218ENST00000553200 KIF21BO75037 1637 aa40.03■■■■■ 4
NR4A1-218ENST00000553200 UGGT2Q9NYU1 1516 aa39.99■■■■□ 3.99
NR4A1-218ENST00000553200 DISP1Q96F81 1524 aa39.94■■■■□ 3.98
NR4A1-218ENST00000553200 CARMIL2Q6F5E8 1435 aa39.88■■■■□ 3.97
NR4A1-218ENST00000553200 KIAA0556O60303 1618 aa39.86■■■■□ 3.97
NR4A1-218ENST00000553200 EHMT2Q96KQ7 1210 aa39.8■■■■□ 3.96
NR4A1-218ENST00000553200 TNIKQ9UKE5 1360 aa39.78■■■■□ 3.96
NR4A1-218ENST00000553200 GOLGA3Q08378 1498 aa39.75■■■■□ 3.95
NR4A1-218ENST00000553200 PTPRGP23470 1445 aa39.74■■■■□ 3.95
NR4A1-218ENST00000553200 TTBK1Q5TCY1 1321 aaPredicted RBP39.73■■■■□ 3.95
NR4A1-218ENST00000553200 ADCY10Q96PN6 1610 aa39.7■■■■□ 3.95
NR4A1-218ENST00000553200 SAMD9Q5K651 1589 aa39.63■■■■□ 3.94
NR4A1-218ENST00000553200 UBTFP17480 764 aaKnown RBP39.61■■■■□ 3.93
NR4A1-218ENST00000553200 RANGAP1P46060 587 aaPredicted RBP39.57■■■■□ 3.93
NR4A1-218ENST00000553200 P3H3Q8IVL6 736 aa39.54■■■■□ 3.92
NR4A1-218ENST00000553200 UACAQ9BZF9 1416 aa39.5■■■■□ 3.91
NR4A1-218ENST00000553200 ABCC2Q92887 1545 aa39.46■■■■□ 3.91
NR4A1-218ENST00000553200 UHRF1BP1LA0JNW5 1464 aa39.46■■■■□ 3.91
NR4A1-218ENST00000553200 PLB1Q6P1J6 1458 aa39.44■■■■□ 3.9
NR4A1-218ENST00000553200 EFCAB5A4FU69 1503 aa39.4■■■■□ 3.9
NR4A1-218ENST00000553200 ABCA8O94911 1581 aa39.4■■■■□ 3.9
NR4A1-218ENST00000553200 FHOD3Q2V2M9 1422 aa39.4■■■■□ 3.9
NR4A1-218ENST00000553200 TRHP20396 242 aaPredicted RBP39.39■■■■□ 3.9
NR4A1-218ENST00000553200 NPM1P06748 294 aaKnown RBP eCLIP39.36■■■■□ 3.89
NR4A1-218ENST00000553200 MAPKBP1O60336 1514 aa39.35■■■■□ 3.89
NR4A1-218ENST00000553200 ARHGAP35Q9NRY4 1499 aa39.3■■■■□ 3.88
NR4A1-218ENST00000553200 ZCCHC11Q5TAX3 1644 aaKnown RBP39.29■■■■□ 3.88
NR4A1-218ENST00000553200 KDM5BQ9UGL1 1544 aa39.29■■■■□ 3.88
NR4A1-218ENST00000553200 KIF13AQ9H1H9 1805 aa39.26■■■■□ 3.87
NR4A1-218ENST00000553200 RAPGEF6Q8TEU7 1601 aa39.22■■■■□ 3.87
NR4A1-218ENST00000553200 ASXL2Q76L83 1435 aa39.15■■■■□ 3.86
NR4A1-218ENST00000553200 ABCC10Q5T3U5 1492 aa39.15■■■■□ 3.86
NR4A1-218ENST00000553200 DIP2BQ9P265 1576 aa39.15■■■■□ 3.86
NR4A1-218ENST00000553200 LOC105371045A0A1W2PR82 267 aa39.1■■■■□ 3.85
NR4A1-218ENST00000553200 ARID3CA6NKF2 412 aa39.08■■■■□ 3.85
NR4A1-218ENST00000553200 NUP153P49790 1475 aaKnown RBP39.07■■■■□ 3.85
NR4A1-218ENST00000553200 ATP10BO94823 1461 aa39.05■■■■□ 3.84
NR4A1-218ENST00000553200 CLIP1P30622 1438 aa39.05■■■■□ 3.84
NR4A1-218ENST00000553200 FAM69CQ0P6D2 419 aa39.03■■■■□ 3.84
NR4A1-218ENST00000553200 FMN1Q68DA7 1419 aa38.99■■■■□ 3.83
NR4A1-218ENST00000553200 WDR7Q9Y4E6 1490 aa38.97■■■■□ 3.83
NR4A1-218ENST00000553200 EPRSP07814 1512 aaKnown RBP38.94■■■■□ 3.82
NR4A1-218ENST00000553200 CEP162Q5TB80 1403 aa38.92■■■■□ 3.82
NR4A1-218ENST00000553200 GLI2P10070 1586 aa38.91■■■■□ 3.82
NR4A1-218ENST00000553200 TSPOAP1O95153 1857 aa38.9■■■■□ 3.82
NR4A1-218ENST00000553200 HECW1Q76N89 1606 aa38.88■■■■□ 3.81
NR4A1-218ENST00000553200 PCF11O94913 1555 aaKnown RBP38.85■■■■□ 3.81
NR4A1-218ENST00000553200 LRRIQ1Q96JM4 1722 aa38.85■■■■□ 3.81
NR4A1-218ENST00000553200 CDK13Q14004 1512 aaKnown RBP38.84■■■■□ 3.81
NR4A1-218ENST00000553200 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.82■■■■□ 3.8
NR4A1-218ENST00000553200 HNRNPUL2Q1KMD3 747 aaKnown RBP38.82■■■■□ 3.8
NR4A1-218ENST00000553200 MAP3K4Q9Y6R4 1608 aa38.79■■■■□ 3.8
NR4A1-218ENST00000553200 ATP1B4Q9UN42 357 aaPredicted RBP38.79■■■■□ 3.8
NR4A1-218ENST00000553200 KCNH8Q96L42 1107 aa38.78■■■■□ 3.8
NR4A1-218ENST00000553200 PPRC1Q5VV67 1664 aaKnown RBP38.78■■■■□ 3.8
NR4A1-218ENST00000553200 CASKIN1Q8WXD9 1431 aa38.75■■■■□ 3.79
NR4A1-218ENST00000553200 CFAP43Q8NDM7 1665 aa38.68■■■■□ 3.78
NR4A1-218ENST00000553200 FYCO1Q9BQS8 1478 aa38.67■■■■□ 3.78
NR4A1-218ENST00000553200 PLEKHD1A6NEE1 506 aa38.63■■■■□ 3.77
NR4A1-218ENST00000553200 ABCA9Q8IUA7 1624 aa38.62■■■■□ 3.77
NR4A1-218ENST00000553200 CD109Q6YHK3 1445 aa38.57■■■■□ 3.77
NR4A1-218ENST00000553200 CCDC18Q5T9S5 1454 aa38.56■■■■□ 3.76
NR4A1-218ENST00000553200 MAGI3Q5TCQ9 1506 aa38.5■■■■□ 3.75
NR4A1-218ENST00000553200 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.5■■■■□ 3.75
NR4A1-218ENST00000553200 TTC37Q6PGP7 1564 aa38.48■■■■□ 3.75
NR4A1-218ENST00000553200 TEX14Q8IWB6 1497 aa38.47■■■■□ 3.75
NR4A1-218ENST00000553200 KIF14Q15058 1648 aa38.46■■■■□ 3.75
NR4A1-218ENST00000553200 KDM6BO15054 1643 aa38.45■■■■□ 3.75
NR4A1-218ENST00000553200 CDK11AQ9UQ88 783 aaPredicted RBP38.45■■■■□ 3.75
NR4A1-218ENST00000553200 TROQ12816 1431 aaPredicted RBP38.45■■■■□ 3.75
NR4A1-218ENST00000553200 VPS8Q8N3P4 1428 aa38.43■■■■□ 3.74
NR4A1-218ENST00000553200 COL17A1Q9UMD9 1497 aaPredicted RBP38.35■■■■□ 3.73
NR4A1-218ENST00000553200 MYO5CQ9NQX4 1742 aa38.27■■■■□ 3.72
NR4A1-218ENST00000553200 NEO1Q92859 1461 aa38.22■■■■□ 3.71
NR4A1-218ENST00000553200 TIAM1Q13009 1591 aa38.21■■■■□ 3.71
NR4A1-218ENST00000553200 PLCH2O75038 1416 aa38.21■■■■□ 3.71
NR4A1-218ENST00000553200 FANCAO15360 1455 aa38.18■■■■□ 3.7
NR4A1-218ENST00000553200 MTUS2Q5JR59 1369 aa38.17■■■■□ 3.7
NR4A1-218ENST00000553200 ARAP3Q8WWN8 1544 aa38.17■■■■□ 3.7
NR4A1-218ENST00000553200 CDC42BPBQ9Y5S2 1711 aa38.16■■■■□ 3.7
NR4A1-218ENST00000553200 CFAP74Q9C0B2 1584 aa38.16■■■■□ 3.7
NR4A1-218ENST00000553200 EHBP1L1Q8N3D4 1523 aa38.16■■■■□ 3.7
NR4A1-218ENST00000553200 CDC42BPAQ5VT25 1732 aa38.15■■■■□ 3.7
NR4A1-218ENST00000553200 PHLDB1Q86UU1 1377 aa38.12■■■■□ 3.69
NR4A1-218ENST00000553200 PREX2Q70Z35 1606 aa38.12■■■■□ 3.69
NR4A1-218ENST00000553200 AKNAQ7Z591 1439 aa38.11■■■■□ 3.69
NR4A1-218ENST00000553200 ARHGAP5Q13017 1502 aa38.07■■■■□ 3.69
NR4A1-218ENST00000553200 MAP3K1Q13233 1512 aa38.06■■■■□ 3.68
NR4A1-218ENST00000553200 FRMPD1Q5SYB0 1578 aa38.05■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms