RNA–Protein interactions for RNA: ENST00000553189.5

TMTC1-209, Transcript of transmembrane and tetratricopeptide repeat containing 1, humanhuman

TSL 2

Gene TMTC1, Length 5,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC1-209ENST00000553189 ABCC8Q09428 1581 aa10.14□□□□□ -0.79
TMTC1-209ENST00000553189 GTF3C3Q9Y5Q9 886 aa10.14□□□□□ -0.79
TMTC1-209ENST00000553189 EID1Q9Y6B2 187 aa10.13□□□□□ -0.79
TMTC1-209ENST00000553189 CLSPNQ9HAW4 1339 aa10.13□□□□□ -0.79
TMTC1-209ENST00000553189 DCAF1Q9Y4B6 1507 aa10.12□□□□□ -0.79
TMTC1-209ENST00000553189 MYO15BQ96JP2 1530 aa10.12□□□□□ -0.79
TMTC1-209ENST00000553189 MTUS2Q5JR59 1369 aa10.11□□□□□ -0.79
TMTC1-209ENST00000553189 CCDC9Q9Y3X0 531 aaKnown RBP10.11□□□□□ -0.79
TMTC1-209ENST00000553189 EIF4G1Q04637 1599 aaKnown RBP10.1□□□□□ -0.79
TMTC1-209ENST00000553189 EFCAB2Q5VUJ9 269 aa10.09□□□□□ -0.79
TMTC1-209ENST00000553189 TDRD9Q8NDG6 1382 aaKnown RBP10.09□□□□□ -0.79
TMTC1-209ENST00000553189 KANK1Q14678 1352 aa10.08□□□□□ -0.8
TMTC1-209ENST00000553189 CFDP1Q9UEE9 299 aaPredicted RBP10.08□□□□□ -0.8
TMTC1-209ENST00000553189 CLIP1P30622 1438 aa10.07□□□□□ -0.8
TMTC1-209ENST00000553189 JPH4Q96JJ6 628 aa10.06□□□□□ -0.8
TMTC1-209ENST00000553189 RSF1Q96T23 1441 aaPredicted RBP10.06□□□□□ -0.8
TMTC1-209ENST00000553189 SF3B2Q13435 895 aaKnown RBP10.05□□□□□ -0.8
TMTC1-209ENST00000553189 GGT6Q6P531 493 aa10.04□□□□□ -0.8
TMTC1-209ENST00000553189 FANCD2Q9BXW9 1451 aa10.04□□□□□ -0.8
TMTC1-209ENST00000553189 DMRT2Q9Y5R5 561 aa10.03□□□□□ -0.8
TMTC1-209ENST00000553189 NPHP1O15259 732 aa10.03□□□□□ -0.8
TMTC1-209ENST00000553189 CUX2O14529 1486 aa10.02□□□□□ -0.8
TMTC1-209ENST00000553189 CC2D2AQ9P2K1 1620 aa10.01□□□□□ -0.81
TMTC1-209ENST00000553189 LOC105371045A0A1W2PR82 267 aa10□□□□□ -0.81
TMTC1-209ENST00000553189 ATAD2BQ9ULI0 1458 aa10□□□□□ -0.81
TMTC1-209ENST00000553189 PTPRGP23470 1445 aa10□□□□□ -0.81
TMTC1-209ENST00000553189 ACIN1Q9UKV3 1341 aaKnown RBP10□□□□□ -0.81
TMTC1-209ENST00000553189 CNGB1Q14028 1251 aaPredicted RBP10□□□□□ -0.81
TMTC1-209ENST00000553189 MRC2Q9UBG0 1479 aa10□□□□□ -0.81
TMTC1-209ENST00000553189 GLIPR1L2Q4G1C9 344 aa9.98□□□□□ -0.81
TMTC1-209ENST00000553189 POGZQ7Z3K3 1410 aa9.97□□□□□ -0.81
TMTC1-209ENST00000553189 POGKQ9P215 609 aa9.96□□□□□ -0.81
TMTC1-209ENST00000553189 CARMIL1Q5VZK9 1371 aa9.96□□□□□ -0.81
TMTC1-209ENST00000553189 DNAJC5Q9H3Z4 198 aa9.96□□□□□ -0.82
TMTC1-209ENST00000553189 ANP32AP39687 249 aaKnown RBP9.96□□□□□ -0.82
TMTC1-209ENST00000553189 ZBTB47Q9UFB7 747 aaPredicted RBP9.94□□□□□ -0.82
TMTC1-209ENST00000553189 CHIC2Q9UKJ5 165 aa9.94□□□□□ -0.82
TMTC1-209ENST00000553189 ANP32CO43423 234 aa9.94□□□□□ -0.82
TMTC1-209ENST00000553189 EIF5BO60841 1220 aaKnown RBP9.94□□□□□ -0.82
TMTC1-209ENST00000553189 NCAPD3P42695 1498 aa9.93□□□□□ -0.82
TMTC1-209ENST00000553189 CCNB3Q8WWL7 1395 aa9.93□□□□□ -0.82
TMTC1-209ENST00000553189 IFT140Q96RY7 1462 aa9.9□□□□□ -0.82
TMTC1-209ENST00000553189 TMX4Q9H1E5 349 aaPredicted RBP9.9□□□□□ -0.82
TMTC1-209ENST00000553189 ARXQ96QS3 562 aa9.89□□□□□ -0.83
TMTC1-209ENST00000553189 NEUROD1Q13562 356 aa9.89□□□□□ -0.83
TMTC1-209ENST00000553189 GOLGA3Q08378 1498 aa9.88□□□□□ -0.83
TMTC1-209ENST00000553189 WASHC2CQ9Y4E1 1318 aa9.88□□□□□ -0.83
TMTC1-209ENST00000553189 SPAG9O60271 1321 aaKnown RBP9.87□□□□□ -0.83
TMTC1-209ENST00000553189 CSB-PGBD3P0DP91 1061 aa9.87□□□□□ -0.83
TMTC1-209ENST00000553189 ATF3P18847 181 aa9.86□□□□□ -0.83
TMTC1-209ENST00000553189 PIP4K2BP78356 416 aa9.86□□□□□ -0.83
TMTC1-209ENST00000553189 EEA1Q15075 1411 aa9.85□□□□□ -0.83
TMTC1-209ENST00000553189 ANP32BQ92688 251 aaKnown RBP9.84□□□□□ -0.83
TMTC1-209ENST00000553189 EIF4G2P78344 907 aaKnown RBP eCLIP9.84□□□□□ -0.83
TMTC1-209ENST00000553189 RSPH4AQ5TD94 716 aa9.83□□□□□ -0.84
TMTC1-209ENST00000553189 KIF3BO15066 747 aa9.82□□□□□ -0.84
TMTC1-209ENST00000553189 MROH2BQ7Z745 1585 aa9.82□□□□□ -0.84
TMTC1-209ENST00000553189 GRIN2BQ13224 1484 aa9.81□□□□□ -0.84
TMTC1-209ENST00000553189 PAK3O75914 559 aaPredicted RBP9.8□□□□□ -0.84
TMTC1-209ENST00000553189 GAPVD1Q14C86 1478 aa9.79□□□□□ -0.84
TMTC1-209ENST00000553189 EVA1CP58658 441 aa9.79□□□□□ -0.84
TMTC1-209ENST00000553189 CANXP27824 592 aaKnown RBP9.79□□□□□ -0.84
TMTC1-209ENST00000553189 KLHL34Q8N239 644 aa9.79□□□□□ -0.84
TMTC1-209ENST00000553189 MSH5O43196 834 aa9.79□□□□□ -0.84
TMTC1-209ENST00000553189 KDM2AQ9Y2K7 1162 aa9.78□□□□□ -0.84
TMTC1-209ENST00000553189 FHAD1B1AJZ9 1412 aa9.78□□□□□ -0.84
TMTC1-209ENST00000553189 HMGB2P26583 209 aaKnown RBP9.78□□□□□ -0.84
TMTC1-209ENST00000553189 TOM1O60784 492 aa9.78□□□□□ -0.84
TMTC1-209ENST00000553189 TNIKQ9UKE5 1360 aa9.78□□□□□ -0.84
TMTC1-209ENST00000553189 TMC1Q8TDI8 760 aa9.77□□□□□ -0.84
TMTC1-209ENST00000553189 AQRO60306 1485 aaKnown RBP eCLIP9.77□□□□□ -0.85
TMTC1-209ENST00000553189 THEMISQ8N1K5 641 aaPredicted RBP9.77□□□□□ -0.85
TMTC1-209ENST00000553189 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.76□□□□□ -0.85
TMTC1-209ENST00000553189 SMARCA4P51532 1647 aa9.76□□□□□ -0.85
TMTC1-209ENST00000553189 UBAP1LF5GYI3 381 aa9.75□□□□□ -0.85
TMTC1-209ENST00000553189 FKBP8Q14318 412 aa9.75□□□□□ -0.85
TMTC1-209ENST00000553189 RGL3Q3MIN7 710 aa9.75□□□□□ -0.85
TMTC1-209ENST00000553189 PRG4Q92954 1404 aaPredicted RBP9.75□□□□□ -0.85
TMTC1-209ENST00000553189 PROSER2Q86WR7 435 aaPredicted RBP9.75□□□□□ -0.85
TMTC1-209ENST00000553189 CDCA8Q53HL2 280 aa9.74□□□□□ -0.85
TMTC1-209ENST00000553189 ANKLE2Q86XL3 938 aa9.74□□□□□ -0.85
TMTC1-209ENST00000553189 PPP1R1BQ9UD71 204 aaPredicted RBP9.74□□□□□ -0.85
TMTC1-209ENST00000553189 CCDC88BA6NC98 1476 aa9.74□□□□□ -0.85
TMTC1-209ENST00000553189 RRP7BPQ9NSQ0 103 aa9.74□□□□□ -0.85
TMTC1-209ENST00000553189 NESP48681 1621 aa9.73□□□□□ -0.85
TMTC1-209ENST00000553189 TOP2AP11388 1531 aaKnown RBP9.72□□□□□ -0.85
TMTC1-209ENST00000553189 NGDNQ8NEJ9 315 aaKnown RBP9.72□□□□□ -0.85
TMTC1-209ENST00000553189 LAMC3Q9Y6N6 1575 aa9.71□□□□□ -0.85
TMTC1-209ENST00000553189 NUTM2BA6NNL0 878 aaPredicted RBP9.71□□□□□ -0.86
TMTC1-209ENST00000553189 NUTM2EB1AL46 878 aaPredicted RBP9.71□□□□□ -0.86
TMTC1-209ENST00000553189 NUTM2DQ5VT03 806 aaPredicted RBP9.71□□□□□ -0.86
TMTC1-209ENST00000553189 NUTM2AQ8IVF1 878 aaPredicted RBP9.71□□□□□ -0.86
TMTC1-209ENST00000553189 FMN1Q68DA7 1419 aa9.7□□□□□ -0.86
TMTC1-209ENST00000553189 UPF2Q9HAU5 1272 aaKnown RBP9.69□□□□□ -0.86
TMTC1-209ENST00000553189 SRPK2P78362 688 aaKnown RBP9.69□□□□□ -0.86
TMTC1-209ENST00000553189 HSP90AA1P07900 732 aaKnown RBP9.68□□□□□ -0.86
TMTC1-209ENST00000553189 STK26Q9P289 416 aa9.68□□□□□ -0.86
TMTC1-209ENST00000553189 HMGXB3Q12766 1538 aa9.68□□□□□ -0.86
TMTC1-209ENST00000553189 NBR1Q14596 966 aa9.68□□□□□ -0.86
TMTC1-209ENST00000553189 CEP162Q5TB80 1403 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms