RNA–Protein interactions for RNA: ENST00000553078.5

CNOT2-243, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-243ENST00000553078 PBRM1Q86U86 1689 aa15.35■□□□□ 0.05
CNOT2-243ENST00000553078 WDR62O43379 1518 aa15.34■□□□□ 0.05
CNOT2-243ENST00000553078 FMN1Q68DA7 1419 aa15.34■□□□□ 0.05
CNOT2-243ENST00000553078 TIAM1Q13009 1591 aa15.33■□□□□ 0.05
CNOT2-243ENST00000553078 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.33■□□□□ 0.04
CNOT2-243ENST00000553078 FYCO1Q9BQS8 1478 aa15.33■□□□□ 0.04
CNOT2-243ENST00000553078 AQRO60306 1485 aaKnown RBP eCLIP15.31■□□□□ 0.04
CNOT2-243ENST00000553078 GRIN2BQ13224 1484 aa15.31■□□□□ 0.04
CNOT2-243ENST00000553078 CFAP43Q8NDM7 1665 aa15.31■□□□□ 0.04
CNOT2-243ENST00000553078 PCF11O94913 1555 aaKnown RBP15.3■□□□□ 0.04
CNOT2-243ENST00000553078 DNAJC5BQ9UF47 199 aa15.29■□□□□ 0.04
CNOT2-243ENST00000553078 ADAMTS12P58397 1594 aa15.28■□□□□ 0.04
CNOT2-243ENST00000553078 HNRNPUL2Q1KMD3 747 aaKnown RBP15.28■□□□□ 0.04
CNOT2-243ENST00000553078 FHOD3Q2V2M9 1422 aa15.27■□□□□ 0.04
CNOT2-243ENST00000553078 RRBP1Q9P2E9 1410 aaKnown RBP15.26■□□□□ 0.03
CNOT2-243ENST00000553078 CASKIN1Q8WXD9 1431 aa15.26■□□□□ 0.03
CNOT2-243ENST00000553078 CCNB3Q8WWL7 1395 aa15.24■□□□□ 0.03
CNOT2-243ENST00000553078 SAMD9Q5K651 1589 aa15.24■□□□□ 0.03
CNOT2-243ENST00000553078 THOC2Q8NI27 1593 aaKnown RBP15.24■□□□□ 0.03
CNOT2-243ENST00000553078 LRRC9Q6ZRR7 1453 aa15.23■□□□□ 0.03
CNOT2-243ENST00000553078 ATP1B4Q9UN42 357 aaPredicted RBP15.22■□□□□ 0.03
CNOT2-243ENST00000553078 IQGAP2Q13576 1575 aa15.21■□□□□ 0.03
CNOT2-243ENST00000553078 KANK4Q5T7N3 995 aaPredicted RBP15.21■□□□□ 0.03
CNOT2-243ENST00000553078 P3H3Q8IVL6 736 aa15.21■□□□□ 0.03
CNOT2-243ENST00000553078 EIF4G3O43432 1585 aaKnown RBP15.17■□□□□ 0.02
CNOT2-243ENST00000553078 CCDC18Q5T9S5 1454 aa15.16■□□□□ 0.02
CNOT2-243ENST00000553078 CLSPNQ9HAW4 1339 aa15.16■□□□□ 0.02
CNOT2-243ENST00000553078 MAGI1Q96QZ7 1491 aaPredicted RBP15.15■□□□□ 0.02
CNOT2-243ENST00000553078 HECW1Q76N89 1606 aa15.15■□□□□ 0.02
CNOT2-243ENST00000553078 SNAPC4Q5SXM2 1469 aa15.14■□□□□ 0.01
CNOT2-243ENST00000553078 MTUS2Q5JR59 1369 aa15.14■□□□□ 0.01
CNOT2-243ENST00000553078 EHBP1L1Q8N3D4 1523 aa15.12■□□□□ 0.01
CNOT2-243ENST00000553078 ZNF608Q9ULD9 1512 aaPredicted RBP15.12■□□□□ 0.01
CNOT2-243ENST00000553078 UGGT2Q9NYU1 1516 aa15.1■□□□□ 0.01
CNOT2-243ENST00000553078 GRIN2AQ12879 1464 aa15.09■□□□□ 0.01
CNOT2-243ENST00000553078 KIAA0586Q9BVV6 1533 aa15.09■□□□□ 0.01
CNOT2-243ENST00000553078 SUPT6HQ7KZ85 1726 aaKnown RBP15.08■□□□□ 0
CNOT2-243ENST00000553078 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.07■□□□□ 03e-6■■□□□ 12.8
CNOT2-243ENST00000553078 SYNJ2O15056 1496 aa15.07■□□□□ 0
CNOT2-243ENST00000553078 FAM50AQ14320 339 aaKnown RBP15.05■□□□□ -0
CNOT2-243ENST00000553078 PHLDB1Q86UU1 1377 aa15.05■□□□□ -0
CNOT2-243ENST00000553078 KIAA0556O60303 1618 aa15.03■□□□□ -0
CNOT2-243ENST00000553078 ITGAEP38570 1179 aa15.03■□□□□ -0
CNOT2-243ENST00000553078 CHMP7Q8WUX9 453 aaPredicted RBP15.03■□□□□ -0
CNOT2-243ENST00000553078 FGD6Q6ZV73 1430 aa15□□□□□ -0.01
CNOT2-243ENST00000553078 DHX57Q6P158 1386 aaKnown RBP15□□□□□ -0.01
CNOT2-243ENST00000553078 CARMIL2Q6F5E8 1435 aa15□□□□□ -0.01
CNOT2-243ENST00000553078 SETD5Q9C0A6 1442 aa15□□□□□ -0.01
CNOT2-243ENST00000553078 NCOA2Q15596 1464 aa14.98□□□□□ -0.01
CNOT2-243ENST00000553078 MYOM3Q5VTT5 1437 aa14.98□□□□□ -0.01
CNOT2-243ENST00000553078 EPRSP07814 1512 aaKnown RBP14.97□□□□□ -0.01
CNOT2-243ENST00000553078 RAB3GAP2Q9H2M9 1393 aa14.96□□□□□ -0.02
CNOT2-243ENST00000553078 CDK11AQ9UQ88 783 aaPredicted RBP14.95□□□□□ -0.02
CNOT2-243ENST00000553078 RAPGEF6Q8TEU7 1601 aa14.95□□□□□ -0.02
CNOT2-243ENST00000553078 FBLN2P98095 1184 aa14.94□□□□□ -0.02
CNOT2-243ENST00000553078 LRRIQ1Q96JM4 1722 aa14.94□□□□□ -0.02
CNOT2-243ENST00000553078 NUP160Q12769 1436 aa14.93□□□□□ -0.02
CNOT2-243ENST00000553078 ZNF316A6NFI3 1004 aaPredicted RBP14.93□□□□□ -0.02
CNOT2-243ENST00000553078 CEP170Q5SW79 1584 aa14.93□□□□□ -0.02
CNOT2-243ENST00000553078 DISP1Q96F81 1524 aa14.92□□□□□ -0.02
CNOT2-243ENST00000553078 PTPN23Q9H3S7 1636 aa14.91□□□□□ -0.02
CNOT2-243ENST00000553078 ARHGEF11O15085 1522 aa14.9□□□□□ -0.02
CNOT2-243ENST00000553078 MIA2Q96PC5 1412 aa14.9□□□□□ -0.02
CNOT2-243ENST00000553078 DIEXFQ68CQ4 756 aaKnown RBP14.89□□□□□ -0.03
CNOT2-243ENST00000553078 CDK13Q14004 1512 aaKnown RBP14.88□□□□□ -0.03
CNOT2-243ENST00000553078 ACIN1Q9UKV3 1341 aaKnown RBP14.88□□□□□ -0.03
CNOT2-243ENST00000553078 TCOF1Q13428 1488 aaKnown RBP14.87□□□□□ -0.03
CNOT2-243ENST00000553078 HFM1A2PYH4 1435 aa14.84□□□□□ -0.03
CNOT2-243ENST00000553078 MAGI3Q5TCQ9 1506 aa14.84□□□□□ -0.03
CNOT2-243ENST00000553078 NUP153P49790 1475 aaKnown RBP14.83□□□□□ -0.03
CNOT2-243ENST00000553078 ITSN2Q9NZM3 1697 aa14.83□□□□□ -0.04
CNOT2-243ENST00000553078 AKNAQ7Z591 1439 aa14.83□□□□□ -0.04
CNOT2-243ENST00000553078 JPH4Q96JJ6 628 aa14.82□□□□□ -0.04
CNOT2-243ENST00000553078 TROQ12816 1431 aaPredicted RBP14.81□□□□□ -0.04
CNOT2-243ENST00000553078 GCC2Q8IWJ2 1684 aa14.78□□□□□ -0.04
CNOT2-243ENST00000553078 MAPKBP1O60336 1514 aa14.78□□□□□ -0.04
CNOT2-243ENST00000553078 UACAQ9BZF9 1416 aa14.78□□□□□ -0.04
CNOT2-243ENST00000553078 TIMELESSQ9UNS1 1208 aa14.78□□□□□ -0.04
CNOT2-243ENST00000553078 ADCY10Q96PN6 1610 aa14.77□□□□□ -0.05
CNOT2-243ENST00000553078 ARID3CA6NKF2 412 aa14.76□□□□□ -0.05
CNOT2-243ENST00000553078 KIF14Q15058 1648 aa14.76□□□□□ -0.05
CNOT2-243ENST00000553078 CHD1O14646 1710 aa14.75□□□□□ -0.05
CNOT2-243ENST00000553078 ABCA8O94911 1581 aa14.75□□□□□ -0.05
CNOT2-243ENST00000553078 PLB1Q6P1J6 1458 aa14.75□□□□□ -0.05
CNOT2-243ENST00000553078 NAIPQ13075 1403 aa14.74□□□□□ -0.05
CNOT2-243ENST00000553078 PRG4Q92954 1404 aaPredicted RBP14.73□□□□□ -0.05
CNOT2-243ENST00000553078 DNMT1P26358 1616 aaKnown RBP14.72□□□□□ -0.05
CNOT2-243ENST00000553078 PLEKHD1A6NEE1 506 aa14.71□□□□□ -0.05
CNOT2-243ENST00000553078 CENPBP07199 599 aaPredicted RBP14.71□□□□□ -0.05
CNOT2-243ENST00000553078 PTPRGP23470 1445 aa14.71□□□□□ -0.05
CNOT2-243ENST00000553078 ROCK1Q13464 1354 aa14.71□□□□□ -0.06
CNOT2-243ENST00000553078 TONSLQ96HA7 1378 aa14.71□□□□□ -0.06
CNOT2-243ENST00000553078 DAPK1P53355 1430 aa14.7□□□□□ -0.06
CNOT2-243ENST00000553078 PTPRKQ15262 1439 aa14.68□□□□□ -0.06
CNOT2-243ENST00000553078 CAMSAP2Q08AD1 1489 aa14.68□□□□□ -0.06
CNOT2-243ENST00000553078 CFDP1Q9UEE9 299 aaPredicted RBP14.67□□□□□ -0.06
CNOT2-243ENST00000553078 SHROOM2Q13796 1616 aa14.66□□□□□ -0.06
CNOT2-243ENST00000553078 NEUROD1Q13562 356 aa14.66□□□□□ -0.06
CNOT2-243ENST00000553078 ADGBQ8N7X0 1667 aa14.65□□□□□ -0.06
CNOT2-243ENST00000553078 TRIM52Q96A61 297 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms